RNA–Protein interactions for RNA: ENST00000558478.1

AL136295.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136295.2, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136295.2-201ENST00000558478 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
AL136295.2-201ENST00000558478 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
AL136295.2-201ENST00000558478 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
AL136295.2-201ENST00000558478 MS4A1P11836 297 aa13.11□□□□□ -0.31
AL136295.2-201ENST00000558478 TWISTNBQ3B726 338 aaPredicted RBP13.11□□□□□ -0.31
AL136295.2-201ENST00000558478 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
AL136295.2-201ENST00000558478 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
AL136295.2-201ENST00000558478 NGLY1Q96IV0 654 aa13.11□□□□□ -0.31
AL136295.2-201ENST00000558478 SMC4Q9NTJ3 1288 aa13.11□□□□□ -0.31
AL136295.2-201ENST00000558478 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
AL136295.2-201ENST00000558478 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
AL136295.2-201ENST00000558478 UNC5CLQ8IV45 518 aa13.1□□□□□ -0.31
AL136295.2-201ENST00000558478 C8orf37Q96NL8 207 aa13.1□□□□□ -0.31
AL136295.2-201ENST00000558478 WNK3Q9BYP7 1800 aa13.1□□□□□ -0.31
AL136295.2-201ENST00000558478 MRC1P22897 1456 aa13.1□□□□□ -0.31
AL136295.2-201ENST00000558478 SCN11AQ9UI33 1791 aa13.09□□□□□ -0.31
AL136295.2-201ENST00000558478 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
AL136295.2-201ENST00000558478 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
AL136295.2-201ENST00000558478 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.09□□□□□ -0.31
AL136295.2-201ENST00000558478 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
AL136295.2-201ENST00000558478 SPATA31A1Q5TZJ5 1347 aa13.09□□□□□ -0.31
AL136295.2-201ENST00000558478 TNS2Q63HR2 1409 aa13.08□□□□□ -0.32
AL136295.2-201ENST00000558478 BTBD11A6QL63 1104 aa13.08□□□□□ -0.32
AL136295.2-201ENST00000558478 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
AL136295.2-201ENST00000558478 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
AL136295.2-201ENST00000558478 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
AL136295.2-201ENST00000558478 KDM3BQ7LBC6 1761 aa13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 LRP6O75581 1613 aa13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 CYP27B1O15528 508 aa13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 BCAR3O75815 825 aa13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 HOXB7P09629 217 aa13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 PDE3AQ14432 1141 aa13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 FNBP4Q8N3X1 1017 aaPredicted RBP13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 SLC52A2Q9HAB3 445 aa13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
AL136295.2-201ENST00000558478 ERVV-2B6SEH9 535 aa13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 EXOC5O00471 708 aa13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 VAMP4O75379 141 aa13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 CABP4P57796 275 aa13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 VPS72Q15906 364 aa13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 FRAT1Q92837 279 aaPredicted RBP13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 SIPA1L3O60292 1781 aaPredicted RBP13.06□□□□□ -0.32
AL136295.2-201ENST00000558478 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
AL136295.2-201ENST00000558478 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
AL136295.2-201ENST00000558478 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
AL136295.2-201ENST00000558478 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
AL136295.2-201ENST00000558478 SSH1Q8WYL5 1049 aa13.05□□□□□ -0.32
AL136295.2-201ENST00000558478 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
AL136295.2-201ENST00000558478 USP21Q9UK80 565 aa13.05□□□□□ -0.32
AL136295.2-201ENST00000558478 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
AL136295.2-201ENST00000558478 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
AL136295.2-201ENST00000558478 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
AL136295.2-201ENST00000558478 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
AL136295.2-201ENST00000558478 DDB1Q16531 1140 aa13.04□□□□□ -0.32
AL136295.2-201ENST00000558478 CCDC30Q5VVM6 783 aa13.04□□□□□ -0.32
AL136295.2-201ENST00000558478 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
AL136295.2-201ENST00000558478 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
AL136295.2-201ENST00000558478 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
AL136295.2-201ENST00000558478 PLIN1O60240 522 aa13.03□□□□□ -0.32
AL136295.2-201ENST00000558478 AAMPQ13685 434 aa13.03□□□□□ -0.32
AL136295.2-201ENST00000558478 TSPYL6Q8N831 410 aa13.03□□□□□ -0.32
AL136295.2-201ENST00000558478 ARHGAP45Q92619 1136 aa13.03□□□□□ -0.32
AL136295.2-201ENST00000558478 EIF4A1P60842 406 aaKnown RBP13.02□□□□□ -0.33
AL136295.2-201ENST00000558478 EVX2Q03828 476 aa13.02□□□□□ -0.33
AL136295.2-201ENST00000558478 ATF7IPQ6VMQ6 1270 aa13.02□□□□□ -0.33
AL136295.2-201ENST00000558478 CHMP4BQ9H444 224 aaKnown RBP13.02□□□□□ -0.33
AL136295.2-201ENST00000558478 ZNF790Q6PG37 636 aa13.01□□□□□ -0.33
AL136295.2-201ENST00000558478 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
AL136295.2-201ENST00000558478 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
AL136295.2-201ENST00000558478 API5Q9BZZ5 524 aaKnown RBP13.01□□□□□ -0.33
AL136295.2-201ENST00000558478 TMOD3Q9NYL9 352 aa13.01□□□□□ -0.33
AL136295.2-201ENST00000558478 PTPRCP08575 1304 aa13.01□□□□□ -0.33
AL136295.2-201ENST00000558478 AFF2P51816 1311 aa13□□□□□ -0.33
AL136295.2-201ENST00000558478 PITPNM1O00562 1244 aa13□□□□□ -0.33
AL136295.2-201ENST00000558478 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
AL136295.2-201ENST00000558478 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
AL136295.2-201ENST00000558478 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
AL136295.2-201ENST00000558478 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
AL136295.2-201ENST00000558478 TRPC5Q9UL62 973 aaPredicted RBP13□□□□□ -0.33
AL136295.2-201ENST00000558478 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
AL136295.2-201ENST00000558478 KRT24Q2M2I5 525 aa12.99□□□□□ -0.33
AL136295.2-201ENST00000558478 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
AL136295.2-201ENST00000558478 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
AL136295.2-201ENST00000558478 A0A0G2JS52 829 aa12.98□□□□□ -0.33
AL136295.2-201ENST00000558478 TRIM27P14373 513 aa12.98□□□□□ -0.33
AL136295.2-201ENST00000558478 MYT1Q01538 1121 aa12.98□□□□□ -0.33
AL136295.2-201ENST00000558478 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
AL136295.2-201ENST00000558478 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
AL136295.2-201ENST00000558478 ATRNO75882 1429 aa12.97□□□□□ -0.33
AL136295.2-201ENST00000558478 HEG1Q9ULI3 1381 aa12.97□□□□□ -0.33
AL136295.2-201ENST00000558478 FAM98CQ17RN3 349 aaKnown RBP12.97□□□□□ -0.33
AL136295.2-201ENST00000558478 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
AL136295.2-201ENST00000558478 EXOC6Q8TAG9 804 aa12.97□□□□□ -0.33
AL136295.2-201ENST00000558478 CCDC136Q96JN2 1154 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms