RNA–Protein interactions for RNA: ENST00000558441.1

AC090877.2-201, humanhuman

BASIC

Gene AC090877.2, Length 1,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090877.2-201ENST00000558441 IFT57Q9NWB7 429 aa30.54■■■□□ 2.48
AC090877.2-201ENST00000558441 LAS1LQ9Y4W2 734 aaKnown RBP30.54■■■□□ 2.48
AC090877.2-201ENST00000558441 KCNQ2O43526 872 aa30.53■■■□□ 2.48
AC090877.2-201ENST00000558441 GNAI1P63096 354 aa30.53■■■□□ 2.48
AC090877.2-201ENST00000558441 PIGBQ92521 554 aa30.53■■■□□ 2.48
AC090877.2-201ENST00000558441 BTBD11A6QL63 1104 aa30.53■■■□□ 2.48
AC090877.2-201ENST00000558441 BABAM1Q9NWV8 329 aa30.52■■■□□ 2.48
AC090877.2-201ENST00000558441 ZNF853P0CG23 659 aa30.51■■■□□ 2.47
AC090877.2-201ENST00000558441 CHL1O00533 1208 aa30.5■■■□□ 2.47
AC090877.2-201ENST00000558441 SPINK5Q9NQ38 1064 aaPredicted RBP30.5■■■□□ 2.47
AC090877.2-201ENST00000558441 MIS18AQ9NYP9 233 aa30.5■■■□□ 2.47
AC090877.2-201ENST00000558441 KAT6BQ8WYB5 2073 aa30.49■■■□□ 2.47
AC090877.2-201ENST00000558441 BCL11BQ9C0K0 894 aaPredicted RBP30.49■■■□□ 2.47
AC090877.2-201ENST00000558441 TSPYL4Q9UJ04 414 aa30.49■■■□□ 2.47
AC090877.2-201ENST00000558441 ITGB4P16144 1822 aa30.48■■■□□ 2.47
AC090877.2-201ENST00000558441 E9PSI1 815 aa30.48■■■□□ 2.47
AC090877.2-201ENST00000558441 CDCA7LQ96GN5 454 aa30.48■■■□□ 2.47
AC090877.2-201ENST00000558441 SIPA1L3O60292 1781 aaPredicted RBP30.48■■■□□ 2.47
AC090877.2-201ENST00000558441 MYH16Q9H6N6 1097 aa30.47■■■□□ 2.47
AC090877.2-201ENST00000558441 NHSQ6T4R5 1651 aa30.47■■■□□ 2.47
AC090877.2-201ENST00000558441 TRIM37O94972 964 aa30.47■■■□□ 2.47
AC090877.2-201ENST00000558441 SLFN5Q08AF3 891 aa30.47■■■□□ 2.47
AC090877.2-201ENST00000558441 PTF1AQ7RTS3 328 aa30.46■■■□□ 2.47
AC090877.2-201ENST00000558441 MBIPQ9NS73 344 aa30.46■■■□□ 2.47
AC090877.2-201ENST00000558441 SLC39A6Q13433 755 aa30.45■■■□□ 2.47
AC090877.2-201ENST00000558441 SBF2Q86WG5 1849 aa30.45■■■□□ 2.47
AC090877.2-201ENST00000558441 ZNF790Q6PG37 636 aa30.44■■■□□ 2.46
AC090877.2-201ENST00000558441 TTC5Q8N0Z6 440 aa30.44■■■□□ 2.46
AC090877.2-201ENST00000558441 ATG3Q9NT62 314 aa30.44■■■□□ 2.46
AC090877.2-201ENST00000558441 ASAP1Q9ULH1 1129 aa30.44■■■□□ 2.46
AC090877.2-201ENST00000558441 TSR2Q969E8 191 aaKnown RBP30.43■■■□□ 2.46
AC090877.2-201ENST00000558441 EP400Q96L91 3159 aa30.42■■■□□ 2.46
AC090877.2-201ENST00000558441 FANCIQ9NVI1 1328 aa30.41■■■□□ 2.46
AC090877.2-201ENST00000558441 KCNQ3O43525 872 aa30.41■■■□□ 2.46
AC090877.2-201ENST00000558441 TRMT2AQ8IZ69 625 aaKnown RBP30.41■■■□□ 2.46
AC090877.2-201ENST00000558441 SMARCC1Q92922 1105 aaPredicted RBP30.4■■■□□ 2.46
AC090877.2-201ENST00000558441 DUSP27Q5VZP5 1158 aa30.38■■■□□ 2.45
AC090877.2-201ENST00000558441 KDM3BQ7LBC6 1761 aa30.37■■■□□ 2.45
AC090877.2-201ENST00000558441 EIF4A1P60842 406 aaKnown RBP30.36■■■□□ 2.45
AC090877.2-201ENST00000558441 PAPPAQ13219 1627 aa30.36■■■□□ 2.45
AC090877.2-201ENST00000558441 BTAF1O14981 1849 aa30.36■■■□□ 2.45
AC090877.2-201ENST00000558441 FMNL2Q96PY5 1086 aa30.36■■■□□ 2.45
AC090877.2-201ENST00000558441 PTCD1O75127 700 aaKnown RBP30.35■■■□□ 2.45
AC090877.2-201ENST00000558441 ZNF496Q96IT1 587 aaPredicted RBP30.35■■■□□ 2.45
AC090877.2-201ENST00000558441 PALLDQ8WX93 1383 aa30.35■■■□□ 2.45
AC090877.2-201ENST00000558441 APBA3O96018 575 aa30.33■■■□□ 2.45
AC090877.2-201ENST00000558441 RBM42Q9BTD8 480 aaKnown RBP30.33■■■□□ 2.45
AC090877.2-201ENST00000558441 KCPQ6ZWJ8 1503 aa30.32■■■□□ 2.44
AC090877.2-201ENST00000558441 EXOSC9Q06265 439 aaKnown RBP30.31■■■□□ 2.44
AC090877.2-201ENST00000558441 HEG1Q9ULI3 1381 aa30.3■■■□□ 2.44
AC090877.2-201ENST00000558441 SF3B2Q13435 895 aaKnown RBP30.3■■■□□ 2.44
AC090877.2-201ENST00000558441 KRT24Q2M2I5 525 aa30.3■■■□□ 2.44
AC090877.2-201ENST00000558441 ILDR2Q71H61 639 aa30.3■■■□□ 2.44
AC090877.2-201ENST00000558441 LOC102724428A0A0B4J2F2 783 aa30.29■■■□□ 2.44
AC090877.2-201ENST00000558441 SIK1P57059 783 aa30.29■■■□□ 2.44
AC090877.2-201ENST00000558441 C8orf58Q8NAV2 365 aa30.29■■■□□ 2.44
AC090877.2-201ENST00000558441 UBR2Q8IWV8 1755 aa30.29■■■□□ 2.44
AC090877.2-201ENST00000558441 PLSCR1O15162 318 aa30.28■■■□□ 2.44
AC090877.2-201ENST00000558441 CCDC125Q86Z20 511 aa30.28■■■□□ 2.44
AC090877.2-201ENST00000558441 VSIG10Q8N0Z9 540 aa30.28■■■□□ 2.44
AC090877.2-201ENST00000558441 GIGYF1O75420 1035 aaPredicted RBP30.27■■■□□ 2.44
AC090877.2-201ENST00000558441 SNRPA1P09661 255 aaKnown RBP30.27■■■□□ 2.44
AC090877.2-201ENST00000558441 TNS1Q9HBL0 1735 aaKnown RBP30.27■■■□□ 2.44
AC090877.2-201ENST00000558441 ELL2O00472 640 aaPredicted RBP30.26■■■□□ 2.43
AC090877.2-201ENST00000558441 TWISTNBQ3B726 338 aaPredicted RBP30.25■■■□□ 2.43
AC090877.2-201ENST00000558441 TSPYL6Q8N831 410 aa30.25■■■□□ 2.43
AC090877.2-201ENST00000558441 SLC4A9Q96Q91 983 aa30.25■■■□□ 2.43
AC090877.2-201ENST00000558441 ATP6V1AP38606 617 aa30.25■■■□□ 2.43
AC090877.2-201ENST00000558441 SOS1Q07889 1333 aaPredicted RBP30.24■■■□□ 2.43
AC090877.2-201ENST00000558441 HOXB7P09629 217 aa30.24■■■□□ 2.43
AC090877.2-201ENST00000558441 TEX13AQ9BXU3 409 aaPredicted RBP30.23■■■□□ 2.43
AC090877.2-201ENST00000558441 CCNL1Q9UK58 526 aaPredicted RBP30.22■■■□□ 2.43
AC090877.2-201ENST00000558441 PRAMEF22A3QJZ6 481 aa30.22■■■□□ 2.43
AC090877.2-201ENST00000558441 BAG6P46379 1132 aa30.22■■■□□ 2.43
AC090877.2-201ENST00000558441 CT47B1P0C2W7 299 aaPredicted RBP30.21■■■□□ 2.43
AC090877.2-201ENST00000558441 VAMP4O75379 141 aa30.2■■■□□ 2.43
AC090877.2-201ENST00000558441 SLC27A3Q5K4L6 730 aa30.2■■■□□ 2.43
AC090877.2-201ENST00000558441 DNAJC10Q8IXB1 793 aa30.2■■■□□ 2.43
AC090877.2-201ENST00000558441 LY75O60449 1722 aa30.19■■■□□ 2.42
AC090877.2-201ENST00000558441 TXNRD1Q16881 649 aa30.19■■■□□ 2.42
AC090877.2-201ENST00000558441 UPF1Q92900 1129 aaKnown RBP eCLIP30.19■■■□□ 2.42
AC090877.2-201ENST00000558441 USP16Q9Y5T5 823 aa30.19■■■□□ 2.42
AC090877.2-201ENST00000558441 ITPK1Q13572 414 aa30.18■■■□□ 2.42
AC090877.2-201ENST00000558441 CHMP4AQ9BY43 222 aa30.18■■■□□ 2.42
AC090877.2-201ENST00000558441 EIF2S2P20042 333 aaKnown RBP30.17■■■□□ 2.42
AC090877.2-201ENST00000558441 KCNQ4P56696 695 aa30.17■■■□□ 2.42
AC090877.2-201ENST00000558441 EN1Q05925 392 aaPredicted RBP30.17■■■□□ 2.42
AC090877.2-201ENST00000558441 PROM2Q8N271 834 aa30.17■■■□□ 2.42
AC090877.2-201ENST00000558441 ZNF831Q5JPB2 1677 aa30.17■■■□□ 2.42
AC090877.2-201ENST00000558441 STARD3NLO95772 234 aa30.16■■■□□ 2.42
AC090877.2-201ENST00000558441 HDGFL1Q5TGJ6 251 aa30.16■■■□□ 2.42
AC090877.2-201ENST00000558441 CAMKK2Q96RR4 588 aa30.16■■■□□ 2.42
AC090877.2-201ENST00000558441 ZNF428Q96B54 188 aa30.15■■■□□ 2.42
AC090877.2-201ENST00000558441 LRRC4BQ9NT99 713 aa30.15■■■□□ 2.42
AC090877.2-201ENST00000558441 HMGB2P26583 209 aaKnown RBP30.14■■■□□ 2.42
AC090877.2-201ENST00000558441 DEFB132Q7Z7B7 95 aa30.14■■■□□ 2.42
AC090877.2-201ENST00000558441 RGPD3A6NKT7 1758 aaPredicted RBP30.14■■■□□ 2.42
AC090877.2-201ENST00000558441 RGPD4Q7Z3J3 1758 aa30.14■■■□□ 2.42
AC090877.2-201ENST00000558441 C5P01031 1676 aa30.14■■■□□ 2.42
AC090877.2-201ENST00000558441 CYP19A1P11511 503 aaPredicted RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms