RNA–Protein interactions for RNA: ENST00000558070.1

TRPM1-205, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-205ENST00000558070 MAN1A2O60476 641 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 DKK1O94907 266 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 RASA1P20936 1047 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 SIX5Q8N196 739 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 XAGE2Q96GT9 111 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 ZNF395Q9H8N7 513 aaPredicted RBP6.57□□□□□ -1.36
TRPM1-205ENST00000558070 ETNK1Q9HBU6 452 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 ARHGEF10LQ9HCE6 1279 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 DNAAF2Q9NVR5 837 aaKnown RBP6.57□□□□□ -1.36
TRPM1-205ENST00000558070 NXF1Q9UBU9 619 aaKnown RBP6.57□□□□□ -1.36
TRPM1-205ENST00000558070 KIAA1024Q9UPX6 916 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 HRH3Q9Y5N1 445 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 NCAPD3P42695 1498 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.56□□□□□ -1.36
TRPM1-205ENST00000558070 SOBPA7XYQ1 873 aa6.56□□□□□ -1.36
TRPM1-205ENST00000558070 TMEM229AB2RXF0 380 aa6.56□□□□□ -1.36
TRPM1-205ENST00000558070 IL2RAP01589 272 aa6.56□□□□□ -1.36
TRPM1-205ENST00000558070 INHAP05111 366 aa6.56□□□□□ -1.36
TRPM1-205ENST00000558070 PTK7Q13308 1070 aa6.56□□□□□ -1.36
TRPM1-205ENST00000558070 CRTC2Q53ET0 693 aaPredicted RBP6.56□□□□□ -1.36
TRPM1-205ENST00000558070 PBXIP1Q96AQ6 731 aa6.56□□□□□ -1.36
TRPM1-205ENST00000558070 INSM2Q96T92 566 aaPredicted RBP6.56□□□□□ -1.36
TRPM1-205ENST00000558070 ESYT1Q9BSJ8 1104 aa6.56□□□□□ -1.36
TRPM1-205ENST00000558070 SMARCA2P51531 1590 aa6.56□□□□□ -1.36
TRPM1-205ENST00000558070 SOS2Q07890 1332 aaPredicted RBP6.55□□□□□ -1.36
TRPM1-205ENST00000558070 PPP1R15AO75807 674 aaPredicted RBP6.55□□□□□ -1.36
TRPM1-205ENST00000558070 STAU1O95793 577 aaKnown RBP6.55□□□□□ -1.36
TRPM1-205ENST00000558070 CTSOP43234 321 aaPredicted RBP6.55□□□□□ -1.36
TRPM1-205ENST00000558070 VEGFBP49765 207 aa6.55□□□□□ -1.36
TRPM1-205ENST00000558070 GDF10P55107 478 aa6.55□□□□□ -1.36
TRPM1-205ENST00000558070 ESCO1Q5FWF5 840 aa6.55□□□□□ -1.36
TRPM1-205ENST00000558070 CNKSR1Q969H4 720 aa6.55□□□□□ -1.36
TRPM1-205ENST00000558070 SLC4A9Q96Q91 983 aa6.55□□□□□ -1.36
TRPM1-205ENST00000558070 RAB6BQ9NRW1 208 aa6.55□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L15C9J2P7 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L10C9JJH3 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L13C9JLJ4 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L12C9JPN9 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L11C9JVI0 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L21D6R901 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L18D6R9N7 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L22D6RA61 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L17D6RBQ6 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L19D6RCP7 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L20D6RJB6 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 ATG7O95352 703 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 GPC1P35052 558 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 RNF144AP50876 292 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-205ENST00000558070 USP17L24Q0WX57 530 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 ELOAQ14241 798 aaKnown RBP6.54□□□□□ -1.36
TRPM1-205ENST00000558070 CDCA8Q53HL2 280 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-205ENST00000558070 FOXD4L5Q5VV16 416 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-205ENST00000558070 CCDC102BQ68D86 513 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 LARP1Q6PKG0 1096 aaKnown RBP6.54□□□□□ -1.36
TRPM1-205ENST00000558070 ZNF594Q96JF6 807 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-205ENST00000558070 ARXQ96QS3 562 aa6.54□□□□□ -1.36
TRPM1-205ENST00000558070 TTLL8A6PVC2 850 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 M0R2N6 131 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 MEN1O00255 615 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 CENPCQ03188 943 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 PSME1Q06323 249 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 TPCN2Q8NHX9 752 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 IRF7Q92985 503 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 ARID3AQ99856 593 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 FHDC1Q9C0D6 1143 aaPredicted RBP6.53□□□□□ -1.36
TRPM1-205ENST00000558070 GRIP2Q9C0E4 1043 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 ZNF358Q9NW07 568 aa6.53□□□□□ -1.36
TRPM1-205ENST00000558070 ANKMY2Q8IV38 441 aa6.52□□□□□ -1.37
TRPM1-205ENST00000558070 NPAS3Q8IXF0 933 aa6.52□□□□□ -1.37
TRPM1-205ENST00000558070 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRPM1-205ENST00000558070 RNF217Q8TC41 542 aa6.52□□□□□ -1.37
TRPM1-205ENST00000558070 NLRP3Q96P20 1036 aa6.52□□□□□ -1.37
TRPM1-205ENST00000558070 DNMT3LQ9UJW3 386 aa6.52□□□□□ -1.37
TRPM1-205ENST00000558070 TNIKQ9UKE5 1360 aa6.52□□□□□ -1.37
TRPM1-205ENST00000558070 HMGXB3Q12766 1538 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 H3BM21 787 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 BACH1O14867 736 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 SMTNP53814 917 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 EPHA4P54764 986 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 SEC13P55735 322 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 INSM1Q01101 510 aaPredicted RBP6.51□□□□□ -1.37
TRPM1-205ENST00000558070 DPYDQ12882 1025 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 MTFR1Q15390 333 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 POLMQ9NP87 494 aaPredicted RBP6.51□□□□□ -1.37
TRPM1-205ENST00000558070 ZMIZ1Q9ULJ6 1067 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 ATAD2BQ9ULI0 1458 aa6.51□□□□□ -1.37
TRPM1-205ENST00000558070 SFI1A8K8P3 1242 aa6.5□□□□□ -1.37
TRPM1-205ENST00000558070 WIPF1O43516 503 aa6.5□□□□□ -1.37
TRPM1-205ENST00000558070 SERTAD1Q9UHV2 236 aa6.5□□□□□ -1.37
TRPM1-205ENST00000558070 NOVA2Q9UNW9 492 aaKnown RBP6.5□□□□□ -1.37
TRPM1-205ENST00000558070 CEP162Q5TB80 1403 aa6.5□□□□□ -1.37
TRPM1-205ENST00000558070 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
TRPM1-205ENST00000558070 A6NJY4 79 aa6.49□□□□□ -1.37
TRPM1-205ENST00000558070 FIGNL2A6NMB9 653 aa6.49□□□□□ -1.37
TRPM1-205ENST00000558070 SPATA31C2B4DYI2 1134 aa6.49□□□□□ -1.37
TRPM1-205ENST00000558070 CDK2AP1O14519 115 aa6.49□□□□□ -1.37
TRPM1-205ENST00000558070 FOXK2Q01167 660 aa6.49□□□□□ -1.37
TRPM1-205ENST00000558070 FAM69CQ0P6D2 419 aa6.49□□□□□ -1.37
TRPM1-205ENST00000558070 TLR1Q15399 786 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms