RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 MAP2P11137 1827 aaKnown RBP14.05□□□□□ -0.16
IGKV2D-28-202ENST00000558026 ITGB4P16144 1822 aa14.05□□□□□ -0.16
IGKV2D-28-202ENST00000558026 USP31Q70CQ4 1352 aa14.05□□□□□ -0.16
IGKV2D-28-202ENST00000558026 HMGB2P26583 209 aaKnown RBP14.04□□□□□ -0.16
IGKV2D-28-202ENST00000558026 STAC3Q96MF2 364 aa14.04□□□□□ -0.16
IGKV2D-28-202ENST00000558026 MON2Q7Z3U7 1717 aa14.04□□□□□ -0.16
IGKV2D-28-202ENST00000558026 TIAM2Q8IVF5 1701 aa14.04□□□□□ -0.16
IGKV2D-28-202ENST00000558026 CCDC88AQ3V6T2 1871 aa14.04□□□□□ -0.16
IGKV2D-28-202ENST00000558026 POTEIP0CG38 1075 aa14.03□□□□□ -0.16
IGKV2D-28-202ENST00000558026 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
IGKV2D-28-202ENST00000558026 KDM6AO15550 1401 aaPredicted RBP14.02□□□□□ -0.16
IGKV2D-28-202ENST00000558026 CHRNA5P30532 468 aa14.02□□□□□ -0.17
IGKV2D-28-202ENST00000558026 TMF1P82094 1093 aa14.02□□□□□ -0.17
IGKV2D-28-202ENST00000558026 ITPK1Q13572 414 aa14.02□□□□□ -0.17
IGKV2D-28-202ENST00000558026 IP6K1Q92551 441 aa14.02□□□□□ -0.17
IGKV2D-28-202ENST00000558026 ZC3H4Q9UPT8 1303 aaKnown RBP14.01□□□□□ -0.17
IGKV2D-28-202ENST00000558026 SMARCC1Q92922 1105 aaPredicted RBP14.01□□□□□ -0.17
IGKV2D-28-202ENST00000558026 LOC102724428A0A0B4J2F2 783 aa14□□□□□ -0.17
IGKV2D-28-202ENST00000558026 SIK1P57059 783 aa14□□□□□ -0.17
IGKV2D-28-202ENST00000558026 CHADLQ6NUI6 762 aa14□□□□□ -0.17
IGKV2D-28-202ENST00000558026 NLGN1Q8N2Q7 840 aa14□□□□□ -0.17
IGKV2D-28-202ENST00000558026 USHBP1Q8N6Y0 703 aa14□□□□□ -0.17
IGKV2D-28-202ENST00000558026 EVC2Q86UK5 1308 aa13.99□□□□□ -0.17
IGKV2D-28-202ENST00000558026 LMNB1P20700 586 aa13.99□□□□□ -0.17
IGKV2D-28-202ENST00000558026 PIGBQ92521 554 aa13.99□□□□□ -0.17
IGKV2D-28-202ENST00000558026 PARP3Q9Y6F1 533 aa13.99□□□□□ -0.17
IGKV2D-28-202ENST00000558026 SBNO2Q9Y2G9 1366 aa13.97□□□□□ -0.17
IGKV2D-28-202ENST00000558026 GYS1P13807 737 aa13.97□□□□□ -0.17
IGKV2D-28-202ENST00000558026 FBLN1P23142 703 aa13.96□□□□□ -0.17
IGKV2D-28-202ENST00000558026 TRAPPC3LQ5T215 181 aa13.96□□□□□ -0.17
IGKV2D-28-202ENST00000558026 PASKQ96RG2 1323 aa13.95□□□□□ -0.18
IGKV2D-28-202ENST00000558026 CYP27B1O15528 508 aa13.95□□□□□ -0.18
IGKV2D-28-202ENST00000558026 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
IGKV2D-28-202ENST00000558026 NBPF6Q5VWK0 638 aa13.95□□□□□ -0.18
IGKV2D-28-202ENST00000558026 ARHGEF1Q92888 912 aaKnown RBP13.95□□□□□ -0.18
IGKV2D-28-202ENST00000558026 NBPF4Q96M43 638 aa13.95□□□□□ -0.18
IGKV2D-28-202ENST00000558026 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
IGKV2D-28-202ENST00000558026 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
IGKV2D-28-202ENST00000558026 TMEM88BA6NKF7 163 aa13.94□□□□□ -0.18
IGKV2D-28-202ENST00000558026 HOXC9P31274 260 aa13.94□□□□□ -0.18
IGKV2D-28-202ENST00000558026 RAPGEF4Q8WZA2 1011 aa13.94□□□□□ -0.18
IGKV2D-28-202ENST00000558026 ASAP1Q9ULH1 1129 aa13.94□□□□□ -0.18
IGKV2D-28-202ENST00000558026 RTCBQ9Y3I0 505 aaKnown RBP13.94□□□□□ -0.18
IGKV2D-28-202ENST00000558026 MAP3K19Q56UN5 1328 aa13.93□□□□□ -0.18
IGKV2D-28-202ENST00000558026 DDR1Q08345 913 aa13.93□□□□□ -0.18
IGKV2D-28-202ENST00000558026 TSKSQ9UJT2 592 aa13.93□□□□□ -0.18
IGKV2D-28-202ENST00000558026 CD163L1Q9NR16 1453 aa13.93□□□□□ -0.18
IGKV2D-28-202ENST00000558026 MAP2K1Q02750 393 aaPredicted RBP13.92□□□□□ -0.18
IGKV2D-28-202ENST00000558026 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
IGKV2D-28-202ENST00000558026 MCOLN1Q9GZU1 580 aa13.92□□□□□ -0.18
IGKV2D-28-202ENST00000558026 CGNL1Q0VF96 1302 aa13.91□□□□□ -0.18
IGKV2D-28-202ENST00000558026 NFKBIEO00221 500 aa13.91□□□□□ -0.18
IGKV2D-28-202ENST00000558026 TATP17735 454 aaPredicted RBP13.91□□□□□ -0.18
IGKV2D-28-202ENST00000558026 AMPHP49418 695 aa13.91□□□□□ -0.18
IGKV2D-28-202ENST00000558026 WDR33Q9C0J8 1336 aaKnown RBP13.9□□□□□ -0.18
IGKV2D-28-202ENST00000558026 RFC4P35249 363 aa13.9□□□□□ -0.18
IGKV2D-28-202ENST00000558026 DEFB115Q30KQ5 88 aa13.9□□□□□ -0.18
IGKV2D-28-202ENST00000558026 CASP8AP2Q9UKL3 1982 aa13.89□□□□□ -0.19
IGKV2D-28-202ENST00000558026 RASSF10A6NK89 507 aa13.89□□□□□ -0.19
IGKV2D-28-202ENST00000558026 ITGBL1O95965 494 aaPredicted RBP13.89□□□□□ -0.19
IGKV2D-28-202ENST00000558026 FKBP8Q14318 412 aa13.89□□□□□ -0.19
IGKV2D-28-202ENST00000558026 SRP68Q9UHB9 627 aaKnown RBP13.89□□□□□ -0.19
IGKV2D-28-202ENST00000558026 DDNO94850 711 aaPredicted RBP13.88□□□□□ -0.19
IGKV2D-28-202ENST00000558026 PRPF38BQ5VTL8 546 aaKnown RBP13.88□□□□□ -0.19
IGKV2D-28-202ENST00000558026 SLC4A9Q96Q91 983 aa13.88□□□□□ -0.19
IGKV2D-28-202ENST00000558026 MYH14Q7Z406 1995 aaKnown RBP13.88□□□□□ -0.19
IGKV2D-28-202ENST00000558026 DICER1Q9UPY3 1922 aaKnown RBP13.88□□□□□ -0.19
IGKV2D-28-202ENST00000558026 ADRA2BP18089 450 aa13.87□□□□□ -0.19
IGKV2D-28-202ENST00000558026 SOX10P56693 466 aa13.86□□□□□ -0.19
IGKV2D-28-202ENST00000558026 ERFEQ4G0M1 354 aa13.86□□□□□ -0.19
IGKV2D-28-202ENST00000558026 LDHDQ86WU2 507 aa13.86□□□□□ -0.19
IGKV2D-28-202ENST00000558026 ATG3Q9NT62 314 aa13.86□□□□□ -0.19
IGKV2D-28-202ENST00000558026 TMOD3Q9NYL9 352 aa13.86□□□□□ -0.19
IGKV2D-28-202ENST00000558026 EDC4Q6P2E9 1401 aaKnown RBP13.86□□□□□ -0.19
IGKV2D-28-202ENST00000558026 COL5A3P25940 1745 aaPredicted RBP13.86□□□□□ -0.19
IGKV2D-28-202ENST00000558026 THSD7BQ9C0I4 1608 aa13.86□□□□□ -0.19
IGKV2D-28-202ENST00000558026 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
IGKV2D-28-202ENST00000558026 KDRP35968 1356 aa13.85□□□□□ -0.19
IGKV2D-28-202ENST00000558026 LTBP1Q14766 1721 aa13.85□□□□□ -0.19
IGKV2D-28-202ENST00000558026 RPS6KA4O75676 772 aa13.85□□□□□ -0.19
IGKV2D-28-202ENST00000558026 POLRMTO00411 1230 aaKnown RBP13.84□□□□□ -0.19
IGKV2D-28-202ENST00000558026 GRM1Q13255 1194 aa13.84□□□□□ -0.19
IGKV2D-28-202ENST00000558026 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
IGKV2D-28-202ENST00000558026 BEGAINQ9BUH8 593 aa13.84□□□□□ -0.19
IGKV2D-28-202ENST00000558026 SLC12A5Q9H2X9 1139 aa13.84□□□□□ -0.19
IGKV2D-28-202ENST00000558026 ABT1Q9ULW3 272 aaKnown RBP13.84□□□□□ -0.19
IGKV2D-28-202ENST00000558026 DGKZQ13574 1117 aa13.83□□□□□ -0.2
IGKV2D-28-202ENST00000558026 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
IGKV2D-28-202ENST00000558026 NKX1-1Q15270 411 aaPredicted RBP13.83□□□□□ -0.2
IGKV2D-28-202ENST00000558026 EAPPQ56P03 285 aaPredicted RBP13.83□□□□□ -0.2
IGKV2D-28-202ENST00000558026 RC3H1Q5TC82 1133 aaKnown RBP13.83□□□□□ -0.2
IGKV2D-28-202ENST00000558026 TTLL6Q8N841 843 aa13.83□□□□□ -0.2
IGKV2D-28-202ENST00000558026 TAF1DQ9H5J8 278 aaPredicted RBP13.83□□□□□ -0.2
IGKV2D-28-202ENST00000558026 AFDNP55196 1824 aaKnown RBP13.83□□□□□ -0.2
IGKV2D-28-202ENST00000558026 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
IGKV2D-28-202ENST00000558026 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
IGKV2D-28-202ENST00000558026 CAPNS2Q96L46 248 aa13.82□□□□□ -0.2
IGKV2D-28-202ENST00000558026 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
IGKV2D-28-202ENST00000558026 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
IGKV2D-28-202ENST00000558026 CNTNAP4Q9C0A0 1308 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms