RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 SOS1Q07889 1333 aaPredicted RBP13.22□□□□□ -0.29
GABRB3-212ENST00000557641 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
GABRB3-212ENST00000557641 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
GABRB3-212ENST00000557641 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
GABRB3-212ENST00000557641 PHKG2P15735 406 aa13.22□□□□□ -0.29
GABRB3-212ENST00000557641 TEFQ10587 303 aa13.22□□□□□ -0.29
GABRB3-212ENST00000557641 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
GABRB3-212ENST00000557641 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.29
GABRB3-212ENST00000557641 RRP1P56182 461 aaKnown RBP13.21□□□□□ -0.29
GABRB3-212ENST00000557641 UNC5CLQ8IV45 518 aa13.21□□□□□ -0.29
GABRB3-212ENST00000557641 FNBP4Q8N3X1 1017 aaPredicted RBP13.21□□□□□ -0.29
GABRB3-212ENST00000557641 NGLY1Q96IV0 654 aa13.21□□□□□ -0.29
GABRB3-212ENST00000557641 CHMP4AQ9BY43 222 aa13.21□□□□□ -0.29
GABRB3-212ENST00000557641 SPATA31A1Q5TZJ5 1347 aa13.2□□□□□ -0.3
GABRB3-212ENST00000557641 NWD2Q9ULI1 1742 aa13.2□□□□□ -0.3
GABRB3-212ENST00000557641 RARSP54136 660 aaKnown RBP13.2□□□□□ -0.3
GABRB3-212ENST00000557641 NKX1-1Q15270 411 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-212ENST00000557641 ALDH1L2Q3SY69 923 aa13.2□□□□□ -0.3
GABRB3-212ENST00000557641 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
GABRB3-212ENST00000557641 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
GABRB3-212ENST00000557641 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
GABRB3-212ENST00000557641 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
GABRB3-212ENST00000557641 CYP27B1O15528 508 aa13.19□□□□□ -0.3
GABRB3-212ENST00000557641 MPRIPQ6WCQ1 1025 aa13.19□□□□□ -0.3
GABRB3-212ENST00000557641 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
GABRB3-212ENST00000557641 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
GABRB3-212ENST00000557641 LRRC37A3O60309 1634 aa13.19□□□□□ -0.3
GABRB3-212ENST00000557641 DISP2A7MBM2 1401 aa13.19□□□□□ -0.3
GABRB3-212ENST00000557641 PKD1L3Q7Z443 1732 aa13.19□□□□□ -0.3
GABRB3-212ENST00000557641 PLCH1Q4KWH8 1693 aa13.18□□□□□ -0.3
GABRB3-212ENST00000557641 VAMP4O75379 141 aa13.18□□□□□ -0.3
GABRB3-212ENST00000557641 VPS72Q15906 364 aa13.18□□□□□ -0.3
GABRB3-212ENST00000557641 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-212ENST00000557641 MEX3CQ5U5Q3 659 aaKnown RBP13.18□□□□□ -0.3
GABRB3-212ENST00000557641 POTEHQ6S545 545 aa13.18□□□□□ -0.3
GABRB3-212ENST00000557641 C8orf37Q96NL8 207 aa13.18□□□□□ -0.3
GABRB3-212ENST00000557641 EXOC5O00471 708 aa13.17□□□□□ -0.3
GABRB3-212ENST00000557641 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
GABRB3-212ENST00000557641 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
GABRB3-212ENST00000557641 USP35Q9P2H5 1018 aa13.17□□□□□ -0.3
GABRB3-212ENST00000557641 ADAMTS7Q9UKP4 1686 aa13.16□□□□□ -0.3
GABRB3-212ENST00000557641 ERVV-2B6SEH9 535 aa13.16□□□□□ -0.3
GABRB3-212ENST00000557641 HOXB7P09629 217 aa13.16□□□□□ -0.3
GABRB3-212ENST00000557641 MS4A1P11836 297 aa13.16□□□□□ -0.3
GABRB3-212ENST00000557641 LRP6O75581 1613 aa13.16□□□□□ -0.3
GABRB3-212ENST00000557641 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
GABRB3-212ENST00000557641 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
GABRB3-212ENST00000557641 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
GABRB3-212ENST00000557641 BCAR3O75815 825 aa13.15□□□□□ -0.3
GABRB3-212ENST00000557641 PDE3AQ14432 1141 aa13.15□□□□□ -0.3
GABRB3-212ENST00000557641 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
GABRB3-212ENST00000557641 USP21Q9UK80 565 aa13.15□□□□□ -0.3
GABRB3-212ENST00000557641 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
GABRB3-212ENST00000557641 KIF16BQ96L93 1317 aa13.14□□□□□ -0.31
GABRB3-212ENST00000557641 KDM6AO15550 1401 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-212ENST00000557641 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
GABRB3-212ENST00000557641 SSH1Q8WYL5 1049 aa13.14□□□□□ -0.31
GABRB3-212ENST00000557641 SMC4Q9NTJ3 1288 aa13.14□□□□□ -0.31
GABRB3-212ENST00000557641 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-212ENST00000557641 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-212ENST00000557641 MRC1P22897 1456 aa13.14□□□□□ -0.31
GABRB3-212ENST00000557641 CANXP27824 592 aaKnown RBP13.13□□□□□ -0.31
GABRB3-212ENST00000557641 CABP4P57796 275 aa13.13□□□□□ -0.31
GABRB3-212ENST00000557641 TSPYL6Q8N831 410 aa13.13□□□□□ -0.31
GABRB3-212ENST00000557641 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
GABRB3-212ENST00000557641 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
GABRB3-212ENST00000557641 TNS2Q63HR2 1409 aa13.13□□□□□ -0.31
GABRB3-212ENST00000557641 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
GABRB3-212ENST00000557641 DDB1Q16531 1140 aa13.12□□□□□ -0.31
GABRB3-212ENST00000557641 ZKSCAN2Q63HK3 967 aa13.12□□□□□ -0.31
GABRB3-212ENST00000557641 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
GABRB3-212ENST00000557641 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.11□□□□□ -0.31
GABRB3-212ENST00000557641 ELL2O00472 640 aaPredicted RBP13.11□□□□□ -0.31
GABRB3-212ENST00000557641 CCDC30Q5VVM6 783 aa13.11□□□□□ -0.31
GABRB3-212ENST00000557641 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
GABRB3-212ENST00000557641 NFATC2IPQ8NCF5 419 aa13.11□□□□□ -0.31
GABRB3-212ENST00000557641 TRPC5Q9UL62 973 aaPredicted RBP13.11□□□□□ -0.31
GABRB3-212ENST00000557641 AFF2P51816 1311 aa13.11□□□□□ -0.31
GABRB3-212ENST00000557641 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
GABRB3-212ENST00000557641 PLIN1O60240 522 aa13.1□□□□□ -0.31
GABRB3-212ENST00000557641 AAMPQ13685 434 aa13.1□□□□□ -0.31
GABRB3-212ENST00000557641 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
GABRB3-212ENST00000557641 TTC5Q8N0Z6 440 aa13.1□□□□□ -0.31
GABRB3-212ENST00000557641 MRPL50Q8N5N7 158 aaKnown RBP13.1□□□□□ -0.31
GABRB3-212ENST00000557641 FBXO41Q8TF61 875 aa13.1□□□□□ -0.31
GABRB3-212ENST00000557641 FRAT1Q92837 279 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-212ENST00000557641 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-212ENST00000557641 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
GABRB3-212ENST00000557641 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
GABRB3-212ENST00000557641 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
GABRB3-212ENST00000557641 SCN11AQ9UI33 1791 aa13.09□□□□□ -0.31
GABRB3-212ENST00000557641 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-212ENST00000557641 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
GABRB3-212ENST00000557641 ATF7IPQ6VMQ6 1270 aa13.08□□□□□ -0.32
GABRB3-212ENST00000557641 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-212ENST00000557641 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
GABRB3-212ENST00000557641 ATRNO75882 1429 aa13.07□□□□□ -0.32
GABRB3-212ENST00000557641 ONECUT3O60422 494 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-212ENST00000557641 GIGYF1O75420 1035 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-212ENST00000557641 DZIP1LQ8IYY4 767 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms