RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 EP400Q96L91 3159 aa18.48■□□□□ 0.55
RIPK3-206ENST00000557624 SBF2Q86WG5 1849 aa18.47■□□□□ 0.55
RIPK3-206ENST00000557624 BCL9O00512 1426 aa18.47■□□□□ 0.55
RIPK3-206ENST00000557624 KCNQ2O43526 872 aa18.47■□□□□ 0.55
RIPK3-206ENST00000557624 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
RIPK3-206ENST00000557624 SIPA1L3O60292 1781 aaPredicted RBP18.46■□□□□ 0.55
RIPK3-206ENST00000557624 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
RIPK3-206ENST00000557624 TAF7Q15545 349 aaPredicted RBP18.45■□□□□ 0.54
RIPK3-206ENST00000557624 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
RIPK3-206ENST00000557624 NHSQ6T4R5 1651 aa18.45■□□□□ 0.54
RIPK3-206ENST00000557624 PIGBQ92521 554 aa18.45■□□□□ 0.54
RIPK3-206ENST00000557624 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
RIPK3-206ENST00000557624 PTF1AQ7RTS3 328 aa18.44■□□□□ 0.54
RIPK3-206ENST00000557624 CDCA7LQ96GN5 454 aa18.44■□□□□ 0.54
RIPK3-206ENST00000557624 SPINK5Q9NQ38 1064 aaPredicted RBP18.44■□□□□ 0.54
RIPK3-206ENST00000557624 IFT57Q9NWB7 429 aa18.44■□□□□ 0.54
RIPK3-206ENST00000557624 TRIM37O94972 964 aa18.43■□□□□ 0.54
RIPK3-206ENST00000557624 GNAI1P63096 354 aa18.43■□□□□ 0.54
RIPK3-206ENST00000557624 CFAP44Q96MT7 982 aa18.43■□□□□ 0.54
RIPK3-206ENST00000557624 TSPYL4Q9UJ04 414 aa18.43■□□□□ 0.54
RIPK3-206ENST00000557624 IL16Q14005 1332 aa18.43■□□□□ 0.54
RIPK3-206ENST00000557624 SLC39A6Q13433 755 aa18.42■□□□□ 0.54
RIPK3-206ENST00000557624 TSR2Q969E8 191 aaKnown RBP18.41■□□□□ 0.54
RIPK3-206ENST00000557624 BTAF1O14981 1849 aa18.41■□□□□ 0.54
RIPK3-206ENST00000557624 CHL1O00533 1208 aa18.41■□□□□ 0.54
RIPK3-206ENST00000557624 MBIPQ9NS73 344 aa18.41■□□□□ 0.54
RIPK3-206ENST00000557624 E9PSI1 815 aa18.4■□□□□ 0.54
RIPK3-206ENST00000557624 ZNF853P0CG23 659 aa18.4■□□□□ 0.54
RIPK3-206ENST00000557624 BCL11BQ9C0K0 894 aaPredicted RBP18.4■□□□□ 0.54
RIPK3-206ENST00000557624 MYH16Q9H6N6 1097 aa18.4■□□□□ 0.54
RIPK3-206ENST00000557624 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
RIPK3-206ENST00000557624 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
RIPK3-206ENST00000557624 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
RIPK3-206ENST00000557624 KCNQ3O43525 872 aa18.39■□□□□ 0.53
RIPK3-206ENST00000557624 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
RIPK3-206ENST00000557624 TTC5Q8N0Z6 440 aa18.39■□□□□ 0.53
RIPK3-206ENST00000557624 SLFN5Q08AF3 891 aa18.38■□□□□ 0.53
RIPK3-206ENST00000557624 ATG3Q9NT62 314 aa18.38■□□□□ 0.53
RIPK3-206ENST00000557624 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
RIPK3-206ENST00000557624 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
RIPK3-206ENST00000557624 PTCD1O75127 700 aaKnown RBP18.36■□□□□ 0.53
RIPK3-206ENST00000557624 PALLDQ8WX93 1383 aa18.36■□□□□ 0.53
RIPK3-206ENST00000557624 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
RIPK3-206ENST00000557624 DUSP27Q5VZP5 1158 aa18.34■□□□□ 0.53
RIPK3-206ENST00000557624 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
RIPK3-206ENST00000557624 ZNF496Q96IT1 587 aaPredicted RBP18.34■□□□□ 0.53
RIPK3-206ENST00000557624 TNS1Q9HBL0 1735 aaKnown RBP18.34■□□□□ 0.53
RIPK3-206ENST00000557624 EIF4A1P60842 406 aaKnown RBP18.34■□□□□ 0.53
RIPK3-206ENST00000557624 KRT24Q2M2I5 525 aa18.34■□□□□ 0.53
RIPK3-206ENST00000557624 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
RIPK3-206ENST00000557624 RBM42Q9BTD8 480 aaKnown RBP18.34■□□□□ 0.53
RIPK3-206ENST00000557624 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.53
RIPK3-206ENST00000557624 APBA3O96018 575 aa18.33■□□□□ 0.52
RIPK3-206ENST00000557624 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.52
RIPK3-206ENST00000557624 FMNL2Q96PY5 1086 aa18.33■□□□□ 0.52
RIPK3-206ENST00000557624 EXOSC9Q06265 439 aaKnown RBP18.32■□□□□ 0.52
RIPK3-206ENST00000557624 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
RIPK3-206ENST00000557624 SF3B2Q13435 895 aaKnown RBP18.31■□□□□ 0.52
RIPK3-206ENST00000557624 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
RIPK3-206ENST00000557624 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
RIPK3-206ENST00000557624 LOC102724428A0A0B4J2F2 783 aa18.3■□□□□ 0.52
RIPK3-206ENST00000557624 SIK1P57059 783 aa18.3■□□□□ 0.52
RIPK3-206ENST00000557624 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
RIPK3-206ENST00000557624 GTF3C3Q9Y5Q9 886 aa18.3■□□□□ 0.52
RIPK3-206ENST00000557624 LY75O60449 1722 aa18.29■□□□□ 0.52
RIPK3-206ENST00000557624 C5P01031 1676 aa18.28■□□□□ 0.52
RIPK3-206ENST00000557624 PRAMEF22A3QJZ6 481 aa18.28■□□□□ 0.52
RIPK3-206ENST00000557624 GIGYF1O75420 1035 aaPredicted RBP18.28■□□□□ 0.52
RIPK3-206ENST00000557624 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
RIPK3-206ENST00000557624 KCNQ4P56696 695 aa18.28■□□□□ 0.52
RIPK3-206ENST00000557624 SLC4A9Q96Q91 983 aa18.28■□□□□ 0.52
RIPK3-206ENST00000557624 ATP6V1AP38606 617 aa18.27■□□□□ 0.52
RIPK3-206ENST00000557624 TWISTNBQ3B726 338 aaPredicted RBP18.27■□□□□ 0.52
RIPK3-206ENST00000557624 CCNL1Q9UK58 526 aaPredicted RBP18.27■□□□□ 0.51
RIPK3-206ENST00000557624 DNAJC10Q8IXB1 793 aa18.26■□□□□ 0.51
RIPK3-206ENST00000557624 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
RIPK3-206ENST00000557624 TJP1Q07157 1748 aa18.25■□□□□ 0.51
RIPK3-206ENST00000557624 PLSCR1O15162 318 aa18.25■□□□□ 0.51
RIPK3-206ENST00000557624 EIF2S2P20042 333 aaKnown RBP18.25■□□□□ 0.51
RIPK3-206ENST00000557624 BAG6P46379 1132 aa18.25■□□□□ 0.51
RIPK3-206ENST00000557624 EN1Q05925 392 aaPredicted RBP18.25■□□□□ 0.51
RIPK3-206ENST00000557624 NECTIN2Q92692 538 aa18.25■□□□□ 0.51
RIPK3-206ENST00000557624 ITPK1Q13572 414 aa18.24■□□□□ 0.51
RIPK3-206ENST00000557624 TXNRD1Q16881 649 aa18.24■□□□□ 0.51
RIPK3-206ENST00000557624 DEFB132Q7Z7B7 95 aa18.24■□□□□ 0.51
RIPK3-206ENST00000557624 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
RIPK3-206ENST00000557624 LAMB4A4D0S4 1761 aa18.24■□□□□ 0.51
RIPK3-206ENST00000557624 VAMP4O75379 141 aa18.23■□□□□ 0.51
RIPK3-206ENST00000557624 HOXB7P09629 217 aa18.23■□□□□ 0.51
RIPK3-206ENST00000557624 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
RIPK3-206ENST00000557624 RGPD3A6NKT7 1758 aaPredicted RBP18.23■□□□□ 0.51
RIPK3-206ENST00000557624 RGPD4Q7Z3J3 1758 aa18.23■□□□□ 0.51
RIPK3-206ENST00000557624 ZNF831Q5JPB2 1677 aa18.23■□□□□ 0.51
RIPK3-206ENST00000557624 HDGFL1Q5TGJ6 251 aa18.23■□□□□ 0.51
RIPK3-206ENST00000557624 UPF1Q92900 1129 aaKnown RBP eCLIP18.23■□□□□ 0.51
RIPK3-206ENST00000557624 TCERG1O14776 1098 aaKnown RBP18.22■□□□□ 0.51
RIPK3-206ENST00000557624 SLC27A3Q5K4L6 730 aa18.22■□□□□ 0.51
RIPK3-206ENST00000557624 PROM2Q8N271 834 aa18.22■□□□□ 0.51
RIPK3-206ENST00000557624 TEX13AQ9BXU3 409 aaPredicted RBP18.22■□□□□ 0.51
RIPK3-206ENST00000557624 LRRC4BQ9NT99 713 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms