RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 ALKQ9UM73 1620 aa16.72■□□□□ 0.27
LINC00639-205ENST00000557440 SYCE3A1L190 88 aa16.72■□□□□ 0.27
LINC00639-205ENST00000557440 NBPF7P0C2Y1 421 aaPredicted RBP16.72■□□□□ 0.27
LINC00639-205ENST00000557440 HOXC9P31274 260 aa16.72■□□□□ 0.27
LINC00639-205ENST00000557440 CWF19L2Q2TBE0 894 aaKnown RBP16.72■□□□□ 0.27
LINC00639-205ENST00000557440 CCDC8Q9H0W5 538 aaPredicted RBP16.72■□□□□ 0.27
LINC00639-205ENST00000557440 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.27
LINC00639-205ENST00000557440 ORAI2Q96SN7 254 aa16.71■□□□□ 0.27
LINC00639-205ENST00000557440 A2ML1A8K2U0 1454 aa16.71■□□□□ 0.27
LINC00639-205ENST00000557440 SETD1BQ9UPS6 1966 aaKnown RBP16.71■□□□□ 0.27
LINC00639-205ENST00000557440 PNPLA6Q8IY17 1366 aa16.71■□□□□ 0.27
LINC00639-205ENST00000557440 CABLES1Q8TDN4 633 aa16.71■□□□□ 0.27
LINC00639-205ENST00000557440 PTPRCP08575 1304 aa16.71■□□□□ 0.27
LINC00639-205ENST00000557440 SKOR2Q2VWA4 1001 aaPredicted RBP16.71■□□□□ 0.27
LINC00639-205ENST00000557440 LMTK2Q8IWU2 1503 aa16.71■□□□□ 0.26
LINC00639-205ENST00000557440 TMEM2Q9UHN6 1383 aa16.71■□□□□ 0.26
LINC00639-205ENST00000557440 CD163L1Q9NR16 1453 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 FIBPO43427 364 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 PALD1Q9ULE6 856 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 RTL1A6NKG5 1358 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 SETBP1Q9Y6X0 1596 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 RAB3GAP1Q15042 981 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 CHRNA2Q15822 529 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
LINC00639-205ENST00000557440 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
LINC00639-205ENST00000557440 PIK3C2BO00750 1634 aa16.69■□□□□ 0.26
LINC00639-205ENST00000557440 CLASRPQ8N2M8 674 aaKnown RBP16.69■□□□□ 0.26
LINC00639-205ENST00000557440 KIF2CQ99661 725 aa16.69■□□□□ 0.26
LINC00639-205ENST00000557440 ARHGEF40Q8TER5 1519 aa16.69■□□□□ 0.26
LINC00639-205ENST00000557440 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
LINC00639-205ENST00000557440 STK3Q13188 491 aa16.69■□□□□ 0.26
LINC00639-205ENST00000557440 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
LINC00639-205ENST00000557440 TMX3Q96JJ7 454 aa16.69■□□□□ 0.26
LINC00639-205ENST00000557440 PROSER2Q86WR7 435 aaPredicted RBP16.69■□□□□ 0.26
LINC00639-205ENST00000557440 SNX21Q969T3 373 aa16.69■□□□□ 0.26
LINC00639-205ENST00000557440 BCL11BQ9C0K0 894 aaPredicted RBP16.69■□□□□ 0.26
LINC00639-205ENST00000557440 FERMT3Q86UX7 667 aa16.68■□□□□ 0.26
LINC00639-205ENST00000557440 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
LINC00639-205ENST00000557440 CPS1P31327 1500 aa16.68■□□□□ 0.26
LINC00639-205ENST00000557440 AACSQ86V21 672 aa16.68■□□□□ 0.26
LINC00639-205ENST00000557440 RAPGEF4Q8WZA2 1011 aa16.68■□□□□ 0.26
LINC00639-205ENST00000557440 ARHGAP31Q2M1Z3 1444 aa16.67■□□□□ 0.26
LINC00639-205ENST00000557440 FLT4P35916 1363 aa16.67■□□□□ 0.26
LINC00639-205ENST00000557440 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
LINC00639-205ENST00000557440 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
LINC00639-205ENST00000557440 MAP3K2Q9Y2U5 619 aa16.67■□□□□ 0.26
LINC00639-205ENST00000557440 G3BP1Q13283 466 aaKnown RBP eCLIP16.66■□□□□ 0.26
LINC00639-205ENST00000557440 DNAAF4Q8WXU2 420 aa16.66■□□□□ 0.26
LINC00639-205ENST00000557440 ESPNB1AK53 854 aa16.66■□□□□ 0.26
LINC00639-205ENST00000557440 NDUFB9Q9Y6M9 179 aa16.66■□□□□ 0.26
LINC00639-205ENST00000557440 PLEKHO1Q53GL0 409 aaPredicted RBP16.66■□□□□ 0.26
LINC00639-205ENST00000557440 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
LINC00639-205ENST00000557440 ANKLE2Q86XL3 938 aa16.65■□□□□ 0.26
LINC00639-205ENST00000557440 NEUROD6Q96NK8 337 aa16.65■□□□□ 0.26
LINC00639-205ENST00000557440 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
LINC00639-205ENST00000557440 ESYT1Q9BSJ8 1104 aa16.65■□□□□ 0.26
LINC00639-205ENST00000557440 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
LINC00639-205ENST00000557440 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
LINC00639-205ENST00000557440 PTCD1O75127 700 aaKnown RBP16.65■□□□□ 0.26
LINC00639-205ENST00000557440 PRPF40BQ6NWY9 871 aaKnown RBP16.65■□□□□ 0.26
LINC00639-205ENST00000557440 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
LINC00639-205ENST00000557440 GOLGA6L4A6NEF3 574 aa16.64■□□□□ 0.25
LINC00639-205ENST00000557440 KDM4AO75164 1064 aa16.64■□□□□ 0.25
LINC00639-205ENST00000557440 PIK3R4Q99570 1358 aa16.64■□□□□ 0.25
LINC00639-205ENST00000557440 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.25
LINC00639-205ENST00000557440 CASTP20810 708 aaKnown RBP16.64■□□□□ 0.25
LINC00639-205ENST00000557440 FSD1Q9BTV5 496 aa16.64■□□□□ 0.25
LINC00639-205ENST00000557440 SMC3Q9UQE7 1217 aa16.64■□□□□ 0.25
LINC00639-205ENST00000557440 ATP8B2P98198 1209 aa16.64■□□□□ 0.25
LINC00639-205ENST00000557440 CNTROBQ8N137 903 aa16.64■□□□□ 0.25
LINC00639-205ENST00000557440 JAKMIP1Q96N16 626 aaKnown RBP16.64■□□□□ 0.25
LINC00639-205ENST00000557440 PPLO60437 1756 aa16.63■□□□□ 0.25
LINC00639-205ENST00000557440 CCDC83Q8IWF9 413 aa16.63■□□□□ 0.25
LINC00639-205ENST00000557440 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
LINC00639-205ENST00000557440 TTC5Q8N0Z6 440 aa16.63■□□□□ 0.25
LINC00639-205ENST00000557440 FBXW7Q969H0 707 aa16.63■□□□□ 0.25
LINC00639-205ENST00000557440 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
LINC00639-205ENST00000557440 ZC3H13Q5T200 1668 aaKnown RBP16.62■□□□□ 0.25
LINC00639-205ENST00000557440 CHMLP26374 656 aa16.62■□□□□ 0.25
LINC00639-205ENST00000557440 NEXNQ0ZGT2 675 aa16.62■□□□□ 0.25
LINC00639-205ENST00000557440 NECAB1Q8N987 351 aa16.62■□□□□ 0.25
LINC00639-205ENST00000557440 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
LINC00639-205ENST00000557440 SIGLEC1Q9BZZ2 1709 aa16.62■□□□□ 0.25
LINC00639-205ENST00000557440 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
LINC00639-205ENST00000557440 CEBPZQ03701 1054 aaKnown RBP16.62■□□□□ 0.25
LINC00639-205ENST00000557440 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
LINC00639-205ENST00000557440 SHPRHQ149N8 1683 aa16.61■□□□□ 0.25
LINC00639-205ENST00000557440 MYO3AQ8NEV4 1616 aa16.61■□□□□ 0.25
LINC00639-205ENST00000557440 ANKRD24Q8TF21 1146 aa16.61■□□□□ 0.25
LINC00639-205ENST00000557440 ZSCAN23Q3MJ62 389 aa16.6■□□□□ 0.25
LINC00639-205ENST00000557440 KIF1BPQ96EK5 621 aa16.6■□□□□ 0.25
LINC00639-205ENST00000557440 COL3A1P02461 1466 aaPredicted RBP16.6■□□□□ 0.25
LINC00639-205ENST00000557440 NLRP1Q9C000 1473 aa16.6■□□□□ 0.25
LINC00639-205ENST00000557440 MYD88Q99836 296 aa16.59■□□□□ 0.25
LINC00639-205ENST00000557440 ATP7BP35670 1465 aa16.59■□□□□ 0.25
LINC00639-205ENST00000557440 GCP02774 474 aa16.59■□□□□ 0.25
LINC00639-205ENST00000557440 UBE2Q2Q8WVN8 375 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms