RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 SIK1P57059 783 aa22.22■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 SLC52A2Q9HAB3 445 aa22.22■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 HMGB2P26583 209 aaKnown RBP22.21■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 PNNQ9H307 717 aaKnown RBP22.21■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 MAPK8IP3Q9UPT6 1336 aa22.21■■□□□ 1.15
TVP23C-CDRT4-204ENST00000557349 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 CASZ1Q86V15 1759 aa22.2■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 ANP32CO43423 234 aa22.19■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 TEFQ10587 303 aa22.19■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 AKT1S1Q96B36 256 aa22.19■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 RBM42Q9BTD8 480 aaKnown RBP22.19■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 TFCP2L1Q9NZI6 479 aa22.19■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 LRP5O75197 1615 aa22.19■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 TAF1LQ8IZX4 1826 aa22.19■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 ATP6V1AP38606 617 aa22.18■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 RTF1Q92541 710 aaKnown RBP22.18■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 C4BP0C0L5 1744 aa22.17■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 TUBGCP6Q96RT7 1819 aa22.16■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 PTCD1O75127 700 aaKnown RBP22.16■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 QSER1Q2KHR3 1735 aa22.15■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 IL17REQ8NFR9 667 aa22.15■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 AK7Q96M32 723 aa22.15■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 PLEKHF1Q96S99 279 aa22.15■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 PDGFDQ9GZP0 370 aaPredicted RBP22.15■■□□□ 1.14
TVP23C-CDRT4-204ENST00000557349 ITPK1Q13572 414 aa22.14■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 ZNF831Q5JPB2 1677 aa22.14■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 PNPLA7Q6ZV29 1317 aa22.13■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 LINC00116Q8NCU8 138 aa22.13■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 ZBTB7AO95365 584 aa22.12■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 SLC39A6Q13433 755 aa22.12■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 NFE2L2Q16236 605 aa22.12■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 MCM10Q7L590 875 aa22.12■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 TTC5Q8N0Z6 440 aa22.12■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 SPON1Q9HCB6 807 aa22.12■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 SIPA1L3O60292 1781 aaPredicted RBP22.12■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 HTATSF1O43719 755 aaKnown RBP22.11■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 SLC4A9Q96Q91 983 aa22.11■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 DLG5Q8TDM6 1919 aa22.1■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 MSH5O43196 834 aa22.1■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 DCTN1Q14203 1278 aa22.1■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 CCDC146Q8IYE0 955 aa22.1■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 KCPQ6ZWJ8 1503 aa22.1■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 COL5A3P25940 1745 aaPredicted RBP22.09■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 CICQ96RK0 1608 aaPredicted RBP22.09■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 TJP1Q07157 1748 aa22.09■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 UBR2Q8IWV8 1755 aa22.08■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 GNPATO15228 680 aa22.08■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 PHF14O94880 888 aa22.08■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 MTFR1LQ9H019 292 aa22.08■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 ADAMTS8Q9UP79 889 aa22.08■■□□□ 1.13
TVP23C-CDRT4-204ENST00000557349 FLAD1Q8NFF5 587 aa22.07■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 ATF5Q9Y2D1 282 aaPredicted RBP22.07■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 UBR3Q6ZT12 1888 aa22.07■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 SRCAPQ6ZRS2 3230 aa22.06■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 BTBD11A6QL63 1104 aa22.06■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 ZNF790Q6PG37 636 aa22.06■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 RUNDC1Q96C34 613 aa22.06■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 MRS2Q9HD23 443 aa22.06■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 PPP1R1BQ9UD71 204 aaPredicted RBP22.06■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 CNTNAP4Q9C0A0 1308 aa22.06■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 COL23A1Q86Y22 540 aaPredicted RBP22.05■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 SLC16A10Q8TF71 515 aa22.05■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.04■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 SSFA2P28290 1259 aa22.04■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 RIPK4P57078 832 aa22.04■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 CCDC184Q52MB2 194 aa22.04■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 TMPOP42166 694 aaKnown RBP22.03■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 LMOD3Q0VAK6 560 aa22.03■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 DNAJC10Q8IXB1 793 aa22.03■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 RRP7AQ9Y3A4 280 aaKnown RBP22.03■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 RTCBQ9Y3I0 505 aaKnown RBP22.03■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 CRKLP46109 303 aaKnown RBP22.02■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 NEUROD2Q15784 382 aa22.02■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 AMIGO3Q86WK7 504 aa22.02■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 VSIG10Q8N0Z9 540 aa22.02■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 ZNF496Q96IT1 587 aaPredicted RBP22.02■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 THUMPD2Q9BTF0 503 aaKnown RBP22.02■■□□□ 1.12
TVP23C-CDRT4-204ENST00000557349 HEG1Q9ULI3 1381 aa22.01■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 RC3H1Q5TC82 1133 aaKnown RBP22.01■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 SMIM5Q71RC9 77 aa22.01■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 FMNL2Q96PY5 1086 aa22.01■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 TAF7Q15545 349 aaPredicted RBP22■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 POLD1P28340 1107 aa21.99■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 PTGER2P43116 358 aa21.99■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 KCNQ3O43525 872 aa21.98■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 RPS6KA4O75676 772 aa21.98■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 MSL1Q68DK7 614 aa21.98■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 PNISRQ8TF01 805 aaKnown RBP21.98■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 CCDC87Q9NVE4 849 aa21.98■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 CYP19A1P11511 503 aaPredicted RBP21.97■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 ADRA2BP18089 450 aa21.97■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 TRAPPC3LQ5T215 181 aa21.97■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 MYH14Q7Z406 1995 aaKnown RBP21.97■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 STARD3NLO95772 234 aa21.96■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 MIS18AQ9NYP9 233 aa21.96■■□□□ 1.11
TVP23C-CDRT4-204ENST00000557349 KDM3BQ7LBC6 1761 aa21.95■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 SGIP1Q9BQI5 828 aa21.95■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 TEX13AQ9BXU3 409 aaPredicted RBP21.95■■□□□ 1.1
TVP23C-CDRT4-204ENST00000557349 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms