RNA–Protein interactions for RNA: ENST00000557019.5

LINC00639-204, long intergenic non-protein coding RNA 639, humanhuman

TSL 5

Gene LINC00639, Length 584 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-204ENST00000557019 NPC1L1Q9UHC9 1359 aa13.38□□□□□ -0.27
LINC00639-204ENST00000557019 NFATC2IPQ8NCF5 419 aa13.38□□□□□ -0.27
LINC00639-204ENST00000557019 SLC16A10Q8TF71 515 aa13.38□□□□□ -0.27
LINC00639-204ENST00000557019 FHDC1Q9C0D6 1143 aaPredicted RBP13.38□□□□□ -0.27
LINC00639-204ENST00000557019 PTCD1O75127 700 aaKnown RBP13.37□□□□□ -0.27
LINC00639-204ENST00000557019 HMGB2P26583 209 aaKnown RBP13.37□□□□□ -0.27
LINC00639-204ENST00000557019 AKAP4Q5JQC9 854 aa13.37□□□□□ -0.27
LINC00639-204ENST00000557019 LINC00116Q8NCU8 138 aa13.37□□□□□ -0.27
LINC00639-204ENST00000557019 UBR3Q6ZT12 1888 aa13.37□□□□□ -0.27
LINC00639-204ENST00000557019 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
LINC00639-204ENST00000557019 KDRP35968 1356 aa13.36□□□□□ -0.27
LINC00639-204ENST00000557019 MTHFSDQ2M296 383 aaKnown RBP13.36□□□□□ -0.27
LINC00639-204ENST00000557019 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
LINC00639-204ENST00000557019 GNPATO15228 680 aa13.35□□□□□ -0.27
LINC00639-204ENST00000557019 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
LINC00639-204ENST00000557019 ITPK1Q13572 414 aa13.35□□□□□ -0.27
LINC00639-204ENST00000557019 FLAD1Q8NFF5 587 aa13.35□□□□□ -0.27
LINC00639-204ENST00000557019 SYT17Q9BSW7 474 aa13.35□□□□□ -0.27
LINC00639-204ENST00000557019 LGR6Q9HBX8 967 aa13.35□□□□□ -0.27
LINC00639-204ENST00000557019 NUDCQ9Y266 331 aa13.35□□□□□ -0.27
LINC00639-204ENST00000557019 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
LINC00639-204ENST00000557019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.34□□□□□ -0.27
LINC00639-204ENST00000557019 U2AF1L5P0DN76 240 aaPredicted RBP13.34□□□□□ -0.27
LINC00639-204ENST00000557019 U2AF1Q01081 240 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC00639-204ENST00000557019 DDX10Q13206 875 aaKnown RBP13.34□□□□□ -0.27
LINC00639-204ENST00000557019 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
LINC00639-204ENST00000557019 RNMTO43148 476 aaKnown RBP13.33□□□□□ -0.28
LINC00639-204ENST00000557019 COL3A1P02461 1466 aaPredicted RBP13.33□□□□□ -0.28
LINC00639-204ENST00000557019 PRKAR2BP31323 418 aa13.32□□□□□ -0.28
LINC00639-204ENST00000557019 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
LINC00639-204ENST00000557019 AMIGO3Q86WK7 504 aa13.32□□□□□ -0.28
LINC00639-204ENST00000557019 SLC4A9Q96Q91 983 aa13.31□□□□□ -0.28
LINC00639-204ENST00000557019 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
LINC00639-204ENST00000557019 RTCBQ9Y3I0 505 aaKnown RBP13.31□□□□□ -0.28
LINC00639-204ENST00000557019 MYH14Q7Z406 1995 aaKnown RBP13.31□□□□□ -0.28
LINC00639-204ENST00000557019 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
LINC00639-204ENST00000557019 SSFA2P28290 1259 aa13.3□□□□□ -0.28
LINC00639-204ENST00000557019 TEFQ10587 303 aa13.3□□□□□ -0.28
LINC00639-204ENST00000557019 GPR162Q16538 588 aa13.3□□□□□ -0.28
LINC00639-204ENST00000557019 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
LINC00639-204ENST00000557019 COL24A1Q17RW2 1714 aa13.3□□□□□ -0.28
LINC00639-204ENST00000557019 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
LINC00639-204ENST00000557019 YY1P25490 414 aa13.29□□□□□ -0.28
LINC00639-204ENST00000557019 TRAPPC3LQ5T215 181 aa13.29□□□□□ -0.28
LINC00639-204ENST00000557019 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
LINC00639-204ENST00000557019 NEFMP07197 916 aa13.28□□□□□ -0.28
LINC00639-204ENST00000557019 RFC4P35249 363 aa13.28□□□□□ -0.28
LINC00639-204ENST00000557019 TTC5Q8N0Z6 440 aa13.28□□□□□ -0.28
LINC00639-204ENST00000557019 NLGN2Q8NFZ4 835 aa13.28□□□□□ -0.28
LINC00639-204ENST00000557019 PHACTR3Q96KR7 559 aa13.28□□□□□ -0.28
LINC00639-204ENST00000557019 TJP1Q07157 1748 aa13.27□□□□□ -0.28
LINC00639-204ENST00000557019 CHD4Q14839 1912 aa13.27□□□□□ -0.28
LINC00639-204ENST00000557019 CRKLP46109 303 aaKnown RBP13.27□□□□□ -0.29
LINC00639-204ENST00000557019 DNAJC10Q8IXB1 793 aa13.27□□□□□ -0.29
LINC00639-204ENST00000557019 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.29
LINC00639-204ENST00000557019 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
LINC00639-204ENST00000557019 WWC3Q9ULE0 1092 aa13.27□□□□□ -0.29
LINC00639-204ENST00000557019 ZNF831Q5JPB2 1677 aa13.27□□□□□ -0.29
LINC00639-204ENST00000557019 RC3H1Q5TC82 1133 aaKnown RBP13.26□□□□□ -0.29
LINC00639-204ENST00000557019 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
LINC00639-204ENST00000557019 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
LINC00639-204ENST00000557019 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
LINC00639-204ENST00000557019 RPS6KA4O75676 772 aa13.25□□□□□ -0.29
LINC00639-204ENST00000557019 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
LINC00639-204ENST00000557019 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
LINC00639-204ENST00000557019 FCHSD2O94868 740 aa13.24□□□□□ -0.29
LINC00639-204ENST00000557019 MCM10Q7L590 875 aa13.24□□□□□ -0.29
LINC00639-204ENST00000557019 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
LINC00639-204ENST00000557019 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
LINC00639-204ENST00000557019 MRC1P22897 1456 aa13.23□□□□□ -0.29
LINC00639-204ENST00000557019 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
LINC00639-204ENST00000557019 MMP10P09238 476 aa13.23□□□□□ -0.29
LINC00639-204ENST00000557019 CANXP27824 592 aaKnown RBP13.23□□□□□ -0.29
LINC00639-204ENST00000557019 DCTN1Q14203 1278 aa13.23□□□□□ -0.29
LINC00639-204ENST00000557019 CCDC87Q9NVE4 849 aa13.23□□□□□ -0.29
LINC00639-204ENST00000557019 SRP68Q9UHB9 627 aaKnown RBP13.23□□□□□ -0.29
LINC00639-204ENST00000557019 ADAMTS7Q9UKP4 1686 aa13.23□□□□□ -0.29
LINC00639-204ENST00000557019 ADRA2BP18089 450 aa13.22□□□□□ -0.29
LINC00639-204ENST00000557019 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
LINC00639-204ENST00000557019 MAPK8IP3Q9UPT6 1336 aa13.21□□□□□ -0.29
LINC00639-204ENST00000557019 ZPR1O75312 459 aa13.21□□□□□ -0.29
LINC00639-204ENST00000557019 RALBP1Q15311 655 aa13.21□□□□□ -0.29
LINC00639-204ENST00000557019 INTS5Q6P9B9 1019 aaKnown RBP13.21□□□□□ -0.29
LINC00639-204ENST00000557019 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
LINC00639-204ENST00000557019 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
LINC00639-204ENST00000557019 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.29
LINC00639-204ENST00000557019 KCPQ6ZWJ8 1503 aa13.21□□□□□ -0.29
LINC00639-204ENST00000557019 N4BP2Q86UW6 1770 aaPredicted RBP13.21□□□□□ -0.29
LINC00639-204ENST00000557019 KCNQ3O43525 872 aa13.2□□□□□ -0.3
LINC00639-204ENST00000557019 STARD3NLO95772 234 aa13.2□□□□□ -0.3
LINC00639-204ENST00000557019 CYP19A1P11511 503 aaPredicted RBP13.2□□□□□ -0.3
LINC00639-204ENST00000557019 GYS1P13807 737 aa13.2□□□□□ -0.3
LINC00639-204ENST00000557019 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
LINC00639-204ENST00000557019 ZNF496Q96IT1 587 aaPredicted RBP13.2□□□□□ -0.3
LINC00639-204ENST00000557019 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
LINC00639-204ENST00000557019 CICQ96RK0 1608 aaPredicted RBP13.2□□□□□ -0.3
LINC00639-204ENST00000557019 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
LINC00639-204ENST00000557019 NPM2Q86SE8 214 aaKnown RBP13.19□□□□□ -0.3
LINC00639-204ENST00000557019 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
LINC00639-204ENST00000557019 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms