RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 ZNF594Q96JF6 807 aaPredicted RBP13.79□□□□□ -0.2
CCDC175-205ENST00000556996 DNAAF2Q9NVR5 837 aaKnown RBP13.79□□□□□ -0.2
CCDC175-205ENST00000556996 ZNF358Q9NW07 568 aa13.79□□□□□ -0.2
CCDC175-205ENST00000556996 SLC35F4A4IF30 521 aa13.78□□□□□ -0.2
CCDC175-205ENST00000556996 PPFIA3O75145 1194 aa13.78□□□□□ -0.2
CCDC175-205ENST00000556996 ZSCAN10Q96SZ4 725 aaPredicted RBP13.78□□□□□ -0.2
CCDC175-205ENST00000556996 H3BM21 787 aa13.77□□□□□ -0.21
CCDC175-205ENST00000556996 DKK1O94907 266 aa13.77□□□□□ -0.21
CCDC175-205ENST00000556996 RFX1P22670 979 aa13.77□□□□□ -0.21
CCDC175-205ENST00000556996 CCDC155Q8N6L0 562 aa13.77□□□□□ -0.21
CCDC175-205ENST00000556996 SPATA31C2B4DYI2 1134 aa13.76□□□□□ -0.21
CCDC175-205ENST00000556996 ATP1A2P50993 1020 aa13.76□□□□□ -0.21
CCDC175-205ENST00000556996 CRTC2Q53ET0 693 aaPredicted RBP13.76□□□□□ -0.21
CCDC175-205ENST00000556996 LCE2AQ5TA79 106 aaPredicted RBP13.76□□□□□ -0.21
CCDC175-205ENST00000556996 CCDC102BQ68D86 513 aa13.76□□□□□ -0.21
CCDC175-205ENST00000556996 NBPF10Q6P3W6 841 aaKnown RBP13.76□□□□□ -0.21
CCDC175-205ENST00000556996 NBPF15Q8N660 670 aa13.76□□□□□ -0.21
CCDC175-205ENST00000556996 USP3Q9Y6I4 520 aa13.76□□□□□ -0.21
CCDC175-205ENST00000556996 RASA1P20936 1047 aa13.75□□□□□ -0.21
CCDC175-205ENST00000556996 SMTNP53814 917 aa13.75□□□□□ -0.21
CCDC175-205ENST00000556996 CDCA8Q53HL2 280 aa13.74□□□□□ -0.21
CCDC175-205ENST00000556996 SIX5Q8N196 739 aa13.74□□□□□ -0.21
CCDC175-205ENST00000556996 SLC4A9Q96Q91 983 aa13.74□□□□□ -0.21
CCDC175-205ENST00000556996 ERBB4Q15303 1308 aa13.73□□□□□ -0.21
CCDC175-205ENST00000556996 PHKA2P46019 1235 aa13.73□□□□□ -0.21
CCDC175-205ENST00000556996 TMEM214Q6NUQ4 689 aaKnown RBP13.73□□□□□ -0.21
CCDC175-205ENST00000556996 TREML4Q6UXN2 200 aa13.73□□□□□ -0.21
CCDC175-205ENST00000556996 TAS1R3Q7RTX0 852 aa13.73□□□□□ -0.21
CCDC175-205ENST00000556996 LARGE2Q8N3Y3 721 aa13.73□□□□□ -0.21
CCDC175-205ENST00000556996 CCDC82Q8N4S0 544 aa13.73□□□□□ -0.21
CCDC175-205ENST00000556996 WFS1O76024 890 aa13.72□□□□□ -0.21
CCDC175-205ENST00000556996 C4orf17Q53FE4 359 aa13.72□□□□□ -0.21
CCDC175-205ENST00000556996 PPARGC1BQ86YN6 1023 aaKnown RBP13.72□□□□□ -0.21
CCDC175-205ENST00000556996 NPAS3Q8IXF0 933 aa13.72□□□□□ -0.21
CCDC175-205ENST00000556996 A6NJY4 79 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 SFI1A8K8P3 1242 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L15C9J2P7 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L10C9JJH3 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L13C9JLJ4 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L12C9JPN9 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L11C9JVI0 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L21D6R901 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L18D6R9N7 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L22D6RA61 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L17D6RBQ6 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L19D6RCP7 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L20D6RJB6 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 EPHA4P54764 986 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 USP17L24Q0WX57 530 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 PTK7Q13308 1070 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 MTFR1Q15390 333 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 CCDC97Q96F63 343 aaPredicted RBP13.71□□□□□ -0.21
CCDC175-205ENST00000556996 VRTNQ9H8Y1 702 aa13.71□□□□□ -0.21
CCDC175-205ENST00000556996 CUEDC1Q9NWM3 386 aaPredicted RBP13.71□□□□□ -0.21
CCDC175-205ENST00000556996 IQSEC3Q9UPP2 1182 aaPredicted RBP13.71□□□□□ -0.21
CCDC175-205ENST00000556996 ZNF295-AS1Q8N0V1 137 aa13.7□□□□□ -0.22
CCDC175-205ENST00000556996 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.69□□□□□ -0.22
CCDC175-205ENST00000556996 ITGA6P23229 1130 aa13.69□□□□□ -0.22
CCDC175-205ENST00000556996 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
CCDC175-205ENST00000556996 TNS4Q8IZW8 715 aa13.69□□□□□ -0.22
CCDC175-205ENST00000556996 RHBDD1Q8TEB9 315 aa13.69□□□□□ -0.22
CCDC175-205ENST00000556996 FAM196BA6NMK8 535 aa13.68□□□□□ -0.22
CCDC175-205ENST00000556996 LARP1Q6PKG0 1096 aaKnown RBP13.68□□□□□ -0.22
CCDC175-205ENST00000556996 BACH1O14867 736 aa13.67□□□□□ -0.22
CCDC175-205ENST00000556996 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
CCDC175-205ENST00000556996 DPYDQ12882 1025 aa13.67□□□□□ -0.22
CCDC175-205ENST00000556996 TBCELQ5QJ74 424 aa13.67□□□□□ -0.22
CCDC175-205ENST00000556996 TSEN2Q8NCE0 465 aaKnown RBP13.67□□□□□ -0.22
CCDC175-205ENST00000556996 TIMMDC1Q9NPL8 285 aa13.67□□□□□ -0.22
CCDC175-205ENST00000556996 SERPINA10Q9UK55 444 aa13.67□□□□□ -0.22
CCDC175-205ENST00000556996 GTF2E1P29083 439 aaPredicted RBP13.66□□□□□ -0.22
CCDC175-205ENST00000556996 PLA2G4AP47712 749 aa13.66□□□□□ -0.22
CCDC175-205ENST00000556996 FOXK2Q01167 660 aa13.66□□□□□ -0.22
CCDC175-205ENST00000556996 WDR44Q5JSH3 913 aa13.66□□□□□ -0.22
CCDC175-205ENST00000556996 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
CCDC175-205ENST00000556996 SCHIP1Q9P0W5 487 aaPredicted RBP13.66□□□□□ -0.22
CCDC175-205ENST00000556996 DYRK1BQ9Y463 629 aa13.66□□□□□ -0.22
CCDC175-205ENST00000556996 SUPT5HO00267 1087 aaKnown RBP13.65□□□□□ -0.22
CCDC175-205ENST00000556996 CDK2AP1O14519 115 aa13.65□□□□□ -0.22
CCDC175-205ENST00000556996 VSIG8P0DPA2 414 aa13.65□□□□□ -0.22
CCDC175-205ENST00000556996 ARXQ96QS3 562 aa13.65□□□□□ -0.22
CCDC175-205ENST00000556996 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
CCDC175-205ENST00000556996 ANKMY2Q8IV38 441 aa13.64□□□□□ -0.23
CCDC175-205ENST00000556996 LGR5O75473 907 aa13.63□□□□□ -0.23
CCDC175-205ENST00000556996 ERICH6Q7L0X2 663 aa13.63□□□□□ -0.23
CCDC175-205ENST00000556996 SLC9A9Q8IVB4 645 aa13.63□□□□□ -0.23
CCDC175-205ENST00000556996 GPAMQ9HCL2 828 aa13.63□□□□□ -0.23
CCDC175-205ENST00000556996 M0R2N6 131 aa13.62□□□□□ -0.23
CCDC175-205ENST00000556996 SEC13P55735 322 aa13.62□□□□□ -0.23
CCDC175-205ENST00000556996 GPR161Q8N6U8 529 aaKnown RBP13.62□□□□□ -0.23
CCDC175-205ENST00000556996 ZDHHC1Q8WTX9 485 aa13.62□□□□□ -0.23
CCDC175-205ENST00000556996 IRF7Q92985 503 aa13.62□□□□□ -0.23
CCDC175-205ENST00000556996 TSPAN10Q9H1Z9 355 aaPredicted RBP13.62□□□□□ -0.23
CCDC175-205ENST00000556996 PARP3Q9Y6F1 533 aa13.62□□□□□ -0.23
CCDC175-205ENST00000556996 CDC14CA4D256 554 aa13.61□□□□□ -0.23
CCDC175-205ENST00000556996 GMPRP36959 345 aa13.61□□□□□ -0.23
CCDC175-205ENST00000556996 RIPOR1Q6ZS17 1223 aa13.61□□□□□ -0.23
CCDC175-205ENST00000556996 NIFKQ9BYG3 293 aaKnown RBP13.61□□□□□ -0.23
CCDC175-205ENST00000556996 ZMIZ1Q9ULJ6 1067 aa13.61□□□□□ -0.23
CCDC175-205ENST00000556996 VWA5B2Q8N398 1253 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms