RNA–Protein interactions for RNA: ENST00000556986.1

KLC1-221, Transcript of kinesin light chain 1, humanhuman

TSL 1 (best)

Gene KLC1, Length 1,150 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-221ENST00000556986 NFATC2IPQ8NCF5 419 aa28.89■■■□□ 2.22
KLC1-221ENST00000556986 MRC1P22897 1456 aa28.89■■■□□ 2.22
KLC1-221ENST00000556986 FCHSD2O94868 740 aa28.88■■■□□ 2.21
KLC1-221ENST00000556986 U2AF1L5P0DN76 240 aaPredicted RBP28.88■■■□□ 2.21
KLC1-221ENST00000556986 PRKAR2BP31323 418 aa28.88■■■□□ 2.21
KLC1-221ENST00000556986 U2AF1Q01081 240 aaKnown RBP eCLIP28.88■■■□□ 2.21
KLC1-221ENST00000556986 PHACTR3Q96KR7 559 aa28.88■■■□□ 2.21
KLC1-221ENST00000556986 COL24A1Q17RW2 1714 aa28.87■■■□□ 2.21
KLC1-221ENST00000556986 ZBTB7AO95365 584 aa28.87■■■□□ 2.21
KLC1-221ENST00000556986 GAS2L2Q8NHY3 880 aa28.87■■■□□ 2.21
KLC1-221ENST00000556986 TFCP2L1Q9NZI6 479 aa28.87■■■□□ 2.21
KLC1-221ENST00000556986 UBR3Q6ZT12 1888 aa28.86■■■□□ 2.21
KLC1-221ENST00000556986 SLC4A9Q96Q91 983 aa28.85■■■□□ 2.21
KLC1-221ENST00000556986 MTFR1LQ9H019 292 aa28.85■■■□□ 2.21
KLC1-221ENST00000556986 SLC52A2Q9HAB3 445 aa28.85■■■□□ 2.21
KLC1-221ENST00000556986 PTGER2P43116 358 aa28.84■■■□□ 2.21
KLC1-221ENST00000556986 ITPK1Q13572 414 aa28.84■■■□□ 2.21
KLC1-221ENST00000556986 ATP6V1AP38606 617 aa28.83■■■□□ 2.21
KLC1-221ENST00000556986 LINC00116Q8NCU8 138 aa28.83■■■□□ 2.21
KLC1-221ENST00000556986 SLC16A10Q8TF71 515 aa28.83■■■□□ 2.21
KLC1-221ENST00000556986 MAP3K5Q99683 1374 aa28.83■■■□□ 2.21
KLC1-221ENST00000556986 SGIP1Q9BQI5 828 aa28.82■■■□□ 2.2
KLC1-221ENST00000556986 ATF5Q9Y2D1 282 aaPredicted RBP28.82■■■□□ 2.2
KLC1-221ENST00000556986 COL5A3P25940 1745 aaPredicted RBP28.82■■■□□ 2.2
KLC1-221ENST00000556986 SIPA1L3O60292 1781 aaPredicted RBP28.81■■■□□ 2.2
KLC1-221ENST00000556986 MYBBP1AQ9BQG0 1328 aaKnown RBP28.81■■■□□ 2.2
KLC1-221ENST00000556986 GNAT3A8MTJ3 354 aa28.81■■■□□ 2.2
KLC1-221ENST00000556986 CICQ96RK0 1608 aaPredicted RBP28.8■■■□□ 2.2
KLC1-221ENST00000556986 IL17REQ8NFR9 667 aa28.8■■■□□ 2.2
KLC1-221ENST00000556986 COL23A1Q86Y22 540 aaPredicted RBP28.79■■■□□ 2.2
KLC1-221ENST00000556986 RBM42Q9BTD8 480 aaKnown RBP28.79■■■□□ 2.2
KLC1-221ENST00000556986 MYH14Q7Z406 1995 aaKnown RBP28.77■■■□□ 2.2
KLC1-221ENST00000556986 AMIGO3Q86WK7 504 aa28.77■■■□□ 2.2
KLC1-221ENST00000556986 PRKRIP1Q9H875 184 aaPredicted RBP28.77■■■□□ 2.2
KLC1-221ENST00000556986 CEMIPQ8WUJ3 1361 aa28.76■■■□□ 2.2
KLC1-221ENST00000556986 ZNF316A6NFI3 1004 aaPredicted RBP28.76■■■□□ 2.19
KLC1-221ENST00000556986 AK7Q96M32 723 aa28.76■■■□□ 2.19
KLC1-221ENST00000556986 PLEKHF1Q96S99 279 aa28.76■■■□□ 2.19
KLC1-221ENST00000556986 TJP1Q07157 1748 aa28.76■■■□□ 2.19
KLC1-221ENST00000556986 DLG5Q8TDM6 1919 aa28.76■■■□□ 2.19
KLC1-221ENST00000556986 UBR2Q8IWV8 1755 aa28.75■■■□□ 2.19
KLC1-221ENST00000556986 FLAD1Q8NFF5 587 aa28.75■■■□□ 2.19
KLC1-221ENST00000556986 PTCD1O75127 700 aaKnown RBP28.74■■■□□ 2.19
KLC1-221ENST00000556986 KCPQ6ZWJ8 1503 aa28.73■■■□□ 2.19
KLC1-221ENST00000556986 SLC39A6Q13433 755 aa28.72■■■□□ 2.19
KLC1-221ENST00000556986 RC3H1Q5TC82 1133 aaKnown RBP28.72■■■□□ 2.19
KLC1-221ENST00000556986 PPP1R1BQ9UD71 204 aaPredicted RBP28.72■■■□□ 2.19
KLC1-221ENST00000556986 SSFA2P28290 1259 aa28.71■■■□□ 2.19
KLC1-221ENST00000556986 CNTNAP4Q9C0A0 1308 aa28.7■■■□□ 2.19
KLC1-221ENST00000556986 SMIM5Q71RC9 77 aa28.7■■■□□ 2.18
KLC1-221ENST00000556986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.69■■■□□ 2.18
KLC1-221ENST00000556986 TEFQ10587 303 aa28.69■■■□□ 2.18
KLC1-221ENST00000556986 GNPATO15228 680 aa28.68■■■□□ 2.18
KLC1-221ENST00000556986 HTATSF1O43719 755 aaKnown RBP28.68■■■□□ 2.18
KLC1-221ENST00000556986 MSH5O43196 834 aa28.67■■■□□ 2.18
KLC1-221ENST00000556986 PNNQ9H307 717 aaKnown RBP28.66■■■□□ 2.18
KLC1-221ENST00000556986 PHF14O94880 888 aa28.65■■■□□ 2.18
KLC1-221ENST00000556986 ARXQ96QS3 562 aa28.65■■■□□ 2.18
KLC1-221ENST00000556986 VSIG10Q8N0Z9 540 aa28.64■■■□□ 2.18
KLC1-221ENST00000556986 RTF1Q92541 710 aaKnown RBP28.64■■■□□ 2.18
KLC1-221ENST00000556986 RPS6KA4O75676 772 aa28.63■■■□□ 2.17
KLC1-221ENST00000556986 NEFMP07197 916 aa28.63■■■□□ 2.17
KLC1-221ENST00000556986 CRKLP46109 303 aaKnown RBP28.63■■■□□ 2.17
KLC1-221ENST00000556986 ZNF790Q6PG37 636 aa28.63■■■□□ 2.17
KLC1-221ENST00000556986 MCM10Q7L590 875 aa28.63■■■□□ 2.17
KLC1-221ENST00000556986 DNAJC10Q8IXB1 793 aa28.63■■■□□ 2.17
KLC1-221ENST00000556986 RTCBQ9Y3I0 505 aaKnown RBP28.63■■■□□ 2.17
KLC1-221ENST00000556986 DCTN1Q14203 1278 aa28.62■■■□□ 2.17
KLC1-221ENST00000556986 POLD1P28340 1107 aa28.61■■■□□ 2.17
KLC1-221ENST00000556986 NFE2L2Q16236 605 aa28.61■■■□□ 2.17
KLC1-221ENST00000556986 INTS5Q6P9B9 1019 aaKnown RBP28.61■■■□□ 2.17
KLC1-221ENST00000556986 C4AP0C0L4 1744 aa28.6■■■□□ 2.17
KLC1-221ENST00000556986 CYP19A1P11511 503 aaPredicted RBP28.6■■■□□ 2.17
KLC1-221ENST00000556986 ADRA2BP18089 450 aa28.6■■■□□ 2.17
KLC1-221ENST00000556986 FHDC1Q9C0D6 1143 aaPredicted RBP28.6■■■□□ 2.17
KLC1-221ENST00000556986 TRAPPC3LQ5T215 181 aa28.59■■■□□ 2.17
KLC1-221ENST00000556986 MSL1Q68DK7 614 aa28.59■■■□□ 2.17
KLC1-221ENST00000556986 TTC5Q8N0Z6 440 aa28.59■■■□□ 2.17
KLC1-221ENST00000556986 ZNF496Q96IT1 587 aaPredicted RBP28.59■■■□□ 2.17
KLC1-221ENST00000556986 SYT17Q9BSW7 474 aa28.59■■■□□ 2.17
KLC1-221ENST00000556986 BTBD11A6QL63 1104 aa28.58■■■□□ 2.17
KLC1-221ENST00000556986 ARHGEF1Q92888 912 aaKnown RBP28.58■■■□□ 2.17
KLC1-221ENST00000556986 KCNQ3O43525 872 aa28.57■■■□□ 2.16
KLC1-221ENST00000556986 MAPK8IP3Q9UPT6 1336 aa28.57■■■□□ 2.16
KLC1-221ENST00000556986 HEG1Q9ULI3 1381 aa28.57■■■□□ 2.16
KLC1-221ENST00000556986 CCDC87Q9NVE4 849 aa28.55■■■□□ 2.16
KLC1-221ENST00000556986 ADAMTS8Q9UP79 889 aa28.54■■■□□ 2.16
KLC1-221ENST00000556986 WDR43Q15061 677 aaKnown RBP eCLIP28.53■■■□□ 2.16
KLC1-221ENST00000556986 TAF7Q15545 349 aaPredicted RBP28.53■■■□□ 2.16
KLC1-221ENST00000556986 FMNL2Q96PY5 1086 aa28.53■■■□□ 2.16
KLC1-221ENST00000556986 KDM3BQ7LBC6 1761 aa28.52■■■□□ 2.16
KLC1-221ENST00000556986 SOS1Q07889 1333 aaPredicted RBP28.51■■■□□ 2.15
KLC1-221ENST00000556986 TMPOP42166 694 aaKnown RBP28.51■■■□□ 2.15
KLC1-221ENST00000556986 TEX13AQ9BXU3 409 aaPredicted RBP28.51■■■□□ 2.15
KLC1-221ENST00000556986 RFC4P35249 363 aa28.5■■■□□ 2.15
KLC1-221ENST00000556986 GYS1P13807 737 aa28.49■■■□□ 2.15
KLC1-221ENST00000556986 RUNDC1Q96C34 613 aa28.49■■■□□ 2.15
KLC1-221ENST00000556986 ZBTB1Q9Y2K1 713 aa28.49■■■□□ 2.15
KLC1-221ENST00000556986 STARD3NLO95772 234 aa28.48■■■□□ 2.15
KLC1-221ENST00000556986 RIPK4P57078 832 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms