RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
ABCD4-226ENST00000556971 LMNB1P20700 586 aa18.13■□□□□ 0.49
ABCD4-226ENST00000556971 HMGB2P26583 209 aaKnown RBP18.12■□□□□ 0.49
ABCD4-226ENST00000556971 ANKRD24Q8TF21 1146 aa18.11■□□□□ 0.49
ABCD4-226ENST00000556971 GNPATO15228 680 aa18.08■□□□□ 0.48
ABCD4-226ENST00000556971 LTN1O94822 1766 aa18.07■□□□□ 0.48
ABCD4-226ENST00000556971 CHRNA5P30532 468 aa18.07■□□□□ 0.48
ABCD4-226ENST00000556971 SRPK2P78362 688 aaKnown RBP18.06■□□□□ 0.48
ABCD4-226ENST00000556971 DPY19L2Q6NUT2 758 aa18.06■□□□□ 0.48
ABCD4-226ENST00000556971 LINC00116Q8NCU8 138 aa18.06■□□□□ 0.48
ABCD4-226ENST00000556971 ABT1Q9ULW3 272 aaKnown RBP18.06■□□□□ 0.48
ABCD4-226ENST00000556971 FXR1P51114 621 aaKnown RBP eCLIP18.05■□□□□ 0.48
ABCD4-226ENST00000556971 GRM1Q13255 1194 aa18.05■□□□□ 0.48
ABCD4-226ENST00000556971 LDHDQ86WU2 507 aa18.05■□□□□ 0.48
ABCD4-226ENST00000556971 ITGBL1O95965 494 aaPredicted RBP18.04■□□□□ 0.48
ABCD4-226ENST00000556971 PAXIP1Q6ZW49 1069 aaPredicted RBP18.04■□□□□ 0.48
ABCD4-226ENST00000556971 TMF1P82094 1093 aa18.03■□□□□ 0.48
ABCD4-226ENST00000556971 CABP2Q9NPB3 220 aa18.03■□□□□ 0.48
ABCD4-226ENST00000556971 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
ABCD4-226ENST00000556971 PARP3Q9Y6F1 533 aa18.03■□□□□ 0.48
ABCD4-226ENST00000556971 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
ABCD4-226ENST00000556971 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
ABCD4-226ENST00000556971 ZCRB1Q8TBF4 217 aaKnown RBP18.02■□□□□ 0.48
ABCD4-226ENST00000556971 CAPNS2Q96L46 248 aa18.02■□□□□ 0.48
ABCD4-226ENST00000556971 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
ABCD4-226ENST00000556971 MEGF6O75095 1541 aa18■□□□□ 0.47
ABCD4-226ENST00000556971 GPR101Q96P66 508 aaPredicted RBP18■□□□□ 0.47
ABCD4-226ENST00000556971 ADAMTS7Q9UKP4 1686 aa17.99■□□□□ 0.47
ABCD4-226ENST00000556971 CYP4F22Q6NT55 531 aa17.99■□□□□ 0.47
ABCD4-226ENST00000556971 MPRIPQ6WCQ1 1025 aa17.99■□□□□ 0.47
ABCD4-226ENST00000556971 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
ABCD4-226ENST00000556971 FAM208AQ9UK61 1670 aaKnown RBP17.99■□□□□ 0.47
ABCD4-226ENST00000556971 SLC17A8Q8NDX2 589 aa17.98■□□□□ 0.47
ABCD4-226ENST00000556971 NFKBIEO00221 500 aa17.97■□□□□ 0.47
ABCD4-226ENST00000556971 DDNO94850 711 aaPredicted RBP17.97■□□□□ 0.47
ABCD4-226ENST00000556971 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.47
ABCD4-226ENST00000556971 ECE1P42892 770 aa17.96■□□□□ 0.47
ABCD4-226ENST00000556971 SMARCC1Q92922 1105 aaPredicted RBP17.96■□□□□ 0.47
ABCD4-226ENST00000556971 LTV1Q96GA3 475 aaPredicted RBP17.96■□□□□ 0.47
ABCD4-226ENST00000556971 DICER1Q9UPY3 1922 aaKnown RBP17.96■□□□□ 0.47
ABCD4-226ENST00000556971 AOC2O75106 756 aa17.95■□□□□ 0.46
ABCD4-226ENST00000556971 GYS1P13807 737 aa17.95■□□□□ 0.46
ABCD4-226ENST00000556971 EAPPQ56P03 285 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-226ENST00000556971 ITGB4P16144 1822 aa17.95■□□□□ 0.46
ABCD4-226ENST00000556971 ERFEQ4G0M1 354 aa17.94■□□□□ 0.46
ABCD4-226ENST00000556971 TAF1DQ9H5J8 278 aaPredicted RBP17.94■□□□□ 0.46
ABCD4-226ENST00000556971 PITPNM2Q9BZ72 1349 aa17.94■□□□□ 0.46
ABCD4-226ENST00000556971 A0A0C4DFX4 3053 aa17.93■□□□□ 0.46
ABCD4-226ENST00000556971 LOC102724428A0A0B4J2F2 783 aa17.93■□□□□ 0.46
ABCD4-226ENST00000556971 CA12O43570 354 aa17.93■□□□□ 0.46
ABCD4-226ENST00000556971 SIK1P57059 783 aa17.93■□□□□ 0.46
ABCD4-226ENST00000556971 ITPK1Q13572 414 aa17.93■□□□□ 0.46
ABCD4-226ENST00000556971 KDM2AQ9Y2K7 1162 aa17.93■□□□□ 0.46
ABCD4-226ENST00000556971 TTC21AQ8NDW8 1320 aa17.93■□□□□ 0.46
ABCD4-226ENST00000556971 NBPF1Q3BBV0 1214 aa17.92■□□□□ 0.46
ABCD4-226ENST00000556971 CLEC11AQ9Y240 323 aa17.92■□□□□ 0.46
ABCD4-226ENST00000556971 RGPD2P0DJD1 1756 aa17.91■□□□□ 0.46
ABCD4-226ENST00000556971 ADAMTSL1Q8N6G6 1762 aa17.91■□□□□ 0.46
ABCD4-226ENST00000556971 SCN4AP35499 1836 aa17.91■□□□□ 0.46
ABCD4-226ENST00000556971 IQCA1LA6NCM1 817 aa17.91■□□□□ 0.46
ABCD4-226ENST00000556971 TRAPPC3LQ5T215 181 aa17.91■□□□□ 0.46
ABCD4-226ENST00000556971 MAP1SQ66K74 1059 aaPredicted RBP17.9■□□□□ 0.46
ABCD4-226ENST00000556971 DDR1Q08345 913 aa17.89■□□□□ 0.45
ABCD4-226ENST00000556971 CNTROBQ8N137 903 aa17.89■□□□□ 0.45
ABCD4-226ENST00000556971 RTCBQ9Y3I0 505 aaKnown RBP17.89■□□□□ 0.45
ABCD4-226ENST00000556971 ARHGEF1Q92888 912 aaKnown RBP17.88■□□□□ 0.45
ABCD4-226ENST00000556971 DLEC1Q9Y238 1755 aa17.88■□□□□ 0.45
ABCD4-226ENST00000556971 MAP2K2P36507 400 aa17.87■□□□□ 0.45
ABCD4-226ENST00000556971 MPHOSPH9Q99550 1183 aa17.87■□□□□ 0.45
ABCD4-226ENST00000556971 SZT2Q5T011 3432 aa17.86■□□□□ 0.45
ABCD4-226ENST00000556971 RFC4P35249 363 aa17.85■□□□□ 0.45
ABCD4-226ENST00000556971 ATP6V1AP38606 617 aa17.85■□□□□ 0.45
ABCD4-226ENST00000556971 PIGBQ92521 554 aa17.85■□□□□ 0.45
ABCD4-226ENST00000556971 TRIOBPQ9H2D6 2365 aa17.85■□□□□ 0.45
ABCD4-226ENST00000556971 DDX21Q9NR30 783 aaKnown RBP eCLIP17.85■□□□□ 0.45
ABCD4-226ENST00000556971 FMR1Q06787 632 aaKnown RBP eCLIP17.83■□□□□ 0.44
ABCD4-226ENST00000556971 TTLL6Q8N841 843 aa17.83■□□□□ 0.44
ABCD4-226ENST00000556971 L3MBTL3Q96JM7 780 aaPredicted RBP17.83■□□□□ 0.44
ABCD4-226ENST00000556971 ADRA2BP18089 450 aa17.82■□□□□ 0.44
ABCD4-226ENST00000556971 BRPF1P55201 1214 aaPredicted RBP17.82■□□□□ 0.44
ABCD4-226ENST00000556971 DCAF11Q8TEB1 546 aa17.82■□□□□ 0.44
ABCD4-226ENST00000556971 USP31Q70CQ4 1352 aa17.81■□□□□ 0.44
ABCD4-226ENST00000556971 PCDH11XQ9BZA7 1347 aa17.81■□□□□ 0.44
ABCD4-226ENST00000556971 PCDH11YQ9BZA8 1340 aa17.81■□□□□ 0.44
ABCD4-226ENST00000556971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
ABCD4-226ENST00000556971 ZNF692Q9BU19 519 aaPredicted RBP17.81■□□□□ 0.44
ABCD4-226ENST00000556971 FER1L6Q2WGJ9 1857 aa17.81■□□□□ 0.44
ABCD4-226ENST00000556971 FKBP8Q14318 412 aa17.8■□□□□ 0.44
ABCD4-226ENST00000556971 CIAPIN1Q6FI81 312 aa17.8■□□□□ 0.44
ABCD4-226ENST00000556971 IP6K1Q92551 441 aa17.8■□□□□ 0.44
ABCD4-226ENST00000556971 EPHX2P34913 555 aa17.79■□□□□ 0.44
ABCD4-226ENST00000556971 NME9Q86XW9 330 aa17.79■□□□□ 0.44
ABCD4-226ENST00000556971 SRP68Q9UHB9 627 aaKnown RBP17.79■□□□□ 0.44
ABCD4-226ENST00000556971 TRPM7Q96QT4 1865 aa17.79■□□□□ 0.44
ABCD4-226ENST00000556971 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
ABCD4-226ENST00000556971 USHBP1Q8N6Y0 703 aa17.78■□□□□ 0.44
ABCD4-226ENST00000556971 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
ABCD4-226ENST00000556971 TLL2Q9Y6L7 1015 aa17.78■□□□□ 0.44
ABCD4-226ENST00000556971 MON2Q7Z3U7 1717 aa17.78■□□□□ 0.44
ABCD4-226ENST00000556971 CD163L1Q9NR16 1453 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms