RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 IL17REQ8NFR9 667 aa30.75■■■□□ 2.51
SIX4-203ENST00000556952 NHSQ6T4R5 1651 aa30.74■■■□□ 2.51
SIX4-203ENST00000556952 RNF123Q5XPI4 1314 aa30.74■■■□□ 2.51
SIX4-203ENST00000556952 SIPA1L3O60292 1781 aaPredicted RBP30.73■■■□□ 2.51
SIX4-203ENST00000556952 IFNL2Q8IZJ0 200 aa30.73■■■□□ 2.51
SIX4-203ENST00000556952 MBIPQ9NS73 344 aa30.73■■■□□ 2.51
SIX4-203ENST00000556952 PCDH11XQ9BZA7 1347 aa30.72■■■□□ 2.51
SIX4-203ENST00000556952 PCDH11YQ9BZA8 1340 aa30.72■■■□□ 2.51
SIX4-203ENST00000556952 CHL1O00533 1208 aa30.72■■■□□ 2.51
SIX4-203ENST00000556952 PHKG2P15735 406 aa30.72■■■□□ 2.51
SIX4-203ENST00000556952 CYP27B1O15528 508 aa30.71■■■□□ 2.51
SIX4-203ENST00000556952 BABAM1Q9NWV8 329 aa30.71■■■□□ 2.51
SIX4-203ENST00000556952 PTF1AQ7RTS3 328 aa30.71■■■□□ 2.51
SIX4-203ENST00000556952 TOGARAM1Q9Y4F4 1720 aa30.7■■■□□ 2.51
SIX4-203ENST00000556952 EXOSC9Q06265 439 aaKnown RBP30.7■■■□□ 2.5
SIX4-203ENST00000556952 CCDC125Q86Z20 511 aa30.7■■■□□ 2.5
SIX4-203ENST00000556952 RNMTO43148 476 aaKnown RBP30.69■■■□□ 2.5
SIX4-203ENST00000556952 NEFLP07196 543 aa30.69■■■□□ 2.5
SIX4-203ENST00000556952 HSP90AB1P08238 724 aaKnown RBP30.69■■■□□ 2.5
SIX4-203ENST00000556952 KDM3BQ7LBC6 1761 aa30.69■■■□□ 2.5
SIX4-203ENST00000556952 ACSBG1Q96GR2 724 aa30.68■■■□□ 2.5
SIX4-203ENST00000556952 MPRIPQ6WCQ1 1025 aa30.67■■■□□ 2.5
SIX4-203ENST00000556952 KDM6AO15550 1401 aaPredicted RBP30.67■■■□□ 2.5
SIX4-203ENST00000556952 TAF7Q15545 349 aaPredicted RBP30.66■■■□□ 2.5
SIX4-203ENST00000556952 LGR6Q9HBX8 967 aa30.66■■■□□ 2.5
SIX4-203ENST00000556952 GTF3C3Q9Y5Q9 886 aa30.66■■■□□ 2.5
SIX4-203ENST00000556952 BTAF1O14981 1849 aa30.66■■■□□ 2.5
SIX4-203ENST00000556952 KCNQ2O43526 872 aa30.66■■■□□ 2.5
SIX4-203ENST00000556952 DEFB132Q7Z7B7 95 aa30.66■■■□□ 2.5
SIX4-203ENST00000556952 MRC1P22897 1456 aa30.66■■■□□ 2.5
SIX4-203ENST00000556952 TEFQ10587 303 aa30.65■■■□□ 2.5
SIX4-203ENST00000556952 SF3B2Q13435 895 aaKnown RBP30.65■■■□□ 2.5
SIX4-203ENST00000556952 TSPYL4Q9UJ04 414 aa30.65■■■□□ 2.5
SIX4-203ENST00000556952 DCAF5Q96JK2 942 aa30.64■■■□□ 2.5
SIX4-203ENST00000556952 ITGB4P16144 1822 aa30.64■■■□□ 2.49
SIX4-203ENST00000556952 RRP1P56182 461 aaKnown RBP30.63■■■□□ 2.49
SIX4-203ENST00000556952 ZNF428Q96B54 188 aa30.63■■■□□ 2.49
SIX4-203ENST00000556952 BCL11BQ9C0K0 894 aaPredicted RBP30.62■■■□□ 2.49
SIX4-203ENST00000556952 APBA3O96018 575 aa30.6■■■□□ 2.49
SIX4-203ENST00000556952 RARSP54136 660 aaKnown RBP30.6■■■□□ 2.49
SIX4-203ENST00000556952 NKX1-1Q15270 411 aaPredicted RBP30.59■■■□□ 2.49
SIX4-203ENST00000556952 BAG6P46379 1132 aa30.58■■■□□ 2.49
SIX4-203ENST00000556952 EN1Q05925 392 aaPredicted RBP30.58■■■□□ 2.49
SIX4-203ENST00000556952 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.58■■■□□ 2.49
SIX4-203ENST00000556952 RGPD3A6NKT7 1758 aaPredicted RBP30.57■■■□□ 2.49
SIX4-203ENST00000556952 RGPD4Q7Z3J3 1758 aa30.57■■■□□ 2.49
SIX4-203ENST00000556952 MIS18AQ9NYP9 233 aa30.57■■■□□ 2.48
SIX4-203ENST00000556952 PRIM1P49642 420 aaKnown RBP30.56■■■□□ 2.48
SIX4-203ENST00000556952 TWISTNBQ3B726 338 aaPredicted RBP30.56■■■□□ 2.48
SIX4-203ENST00000556952 SLC52A2Q9HAB3 445 aa30.56■■■□□ 2.48
SIX4-203ENST00000556952 RREB1Q92766 1687 aa30.55■■■□□ 2.48
SIX4-203ENST00000556952 SYTL4Q96C24 671 aaPredicted RBP30.55■■■□□ 2.48
SIX4-203ENST00000556952 VAMP4O75379 141 aa30.54■■■□□ 2.48
SIX4-203ENST00000556952 ALDH1L2Q3SY69 923 aa30.54■■■□□ 2.48
SIX4-203ENST00000556952 C8orf58Q8NAV2 365 aa30.54■■■□□ 2.48
SIX4-203ENST00000556952 SOS1Q07889 1333 aaPredicted RBP30.54■■■□□ 2.48
SIX4-203ENST00000556952 BTBD11A6QL63 1104 aa30.54■■■□□ 2.48
SIX4-203ENST00000556952 BCAR3O75815 825 aa30.53■■■□□ 2.48
SIX4-203ENST00000556952 FKBP8Q14318 412 aa30.53■■■□□ 2.48
SIX4-203ENST00000556952 TSPYL6Q8N831 410 aa30.53■■■□□ 2.48
SIX4-203ENST00000556952 EZH2Q15910 746 aaKnown RBP30.52■■■□□ 2.48
SIX4-203ENST00000556952 CAMKK2Q96RR4 588 aa30.51■■■□□ 2.47
SIX4-203ENST00000556952 ERVV-2B6SEH9 535 aa30.5■■■□□ 2.47
SIX4-203ENST00000556952 NUP188Q5SRE5 1749 aa30.5■■■□□ 2.47
SIX4-203ENST00000556952 PAPPAQ13219 1627 aa30.49■■■□□ 2.47
SIX4-203ENST00000556952 SMC4Q9NTJ3 1288 aa30.49■■■□□ 2.47
SIX4-203ENST00000556952 SSH1Q8WYL5 1049 aa30.48■■■□□ 2.47
SIX4-203ENST00000556952 ELL2O00472 640 aaPredicted RBP30.47■■■□□ 2.47
SIX4-203ENST00000556952 CABP4P57796 275 aa30.47■■■□□ 2.47
SIX4-203ENST00000556952 ERICH6BQ5W0A0 696 aa30.47■■■□□ 2.47
SIX4-203ENST00000556952 BRPF1P55201 1214 aaPredicted RBP30.46■■■□□ 2.47
SIX4-203ENST00000556952 KRT24Q2M2I5 525 aa30.46■■■□□ 2.47
SIX4-203ENST00000556952 NFATC2IPQ8NCF5 419 aa30.46■■■□□ 2.47
SIX4-203ENST00000556952 LY75O60449 1722 aa30.46■■■□□ 2.47
SIX4-203ENST00000556952 PLSCR1O15162 318 aa30.45■■■□□ 2.47
SIX4-203ENST00000556952 EIF4A1P60842 406 aaKnown RBP30.45■■■□□ 2.47
SIX4-203ENST00000556952 IRX6P78412 446 aaPredicted RBP30.45■■■□□ 2.47
SIX4-203ENST00000556952 BCL2L13Q9BXK5 485 aa30.45■■■□□ 2.47
SIX4-203ENST00000556952 KIF16BQ96L93 1317 aa30.45■■■□□ 2.47
SIX4-203ENST00000556952 PLIN1O60240 522 aa30.45■■■□□ 2.46
SIX4-203ENST00000556952 CACNA1FO60840 1977 aa30.44■■■□□ 2.46
SIX4-203ENST00000556952 HOXB7P09629 217 aa30.44■■■□□ 2.46
SIX4-203ENST00000556952 UBR2Q8IWV8 1755 aa30.44■■■□□ 2.46
SIX4-203ENST00000556952 PIGBQ92521 554 aa30.43■■■□□ 2.46
SIX4-203ENST00000556952 CANXP27824 592 aaKnown RBP30.42■■■□□ 2.46
SIX4-203ENST00000556952 ZNF790Q6PG37 636 aa30.41■■■□□ 2.46
SIX4-203ENST00000556952 PROM2Q8N271 834 aa30.41■■■□□ 2.46
SIX4-203ENST00000556952 HEG1Q9ULI3 1381 aa30.41■■■□□ 2.46
SIX4-203ENST00000556952 CHMP4AQ9BY43 222 aa30.41■■■□□ 2.46
SIX4-203ENST00000556952 TMOD3Q9NYL9 352 aa30.41■■■□□ 2.46
SIX4-203ENST00000556952 KCNQ3O43525 872 aa30.4■■■□□ 2.46
SIX4-203ENST00000556952 FRAT1Q92837 279 aaPredicted RBP30.39■■■□□ 2.46
SIX4-203ENST00000556952 MRPL50Q8N5N7 158 aaKnown RBP30.38■■■□□ 2.45
SIX4-203ENST00000556952 PDE3AQ14432 1141 aa30.37■■■□□ 2.45
SIX4-203ENST00000556952 TXNRD1Q16881 649 aa30.37■■■□□ 2.45
SIX4-203ENST00000556952 TTC5Q8N0Z6 440 aa30.37■■■□□ 2.45
SIX4-203ENST00000556952 ZKSCAN2Q63HK3 967 aa30.37■■■□□ 2.45
SIX4-203ENST00000556952 C5P01031 1676 aa30.36■■■□□ 2.45
SIX4-203ENST00000556952 IPO8O15397 1037 aaKnown RBP30.36■■■□□ 2.45
SIX4-203ENST00000556952 LAMB4A4D0S4 1761 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms