RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 NEUROD2Q15784 382 aa23.01■■□□□ 1.27
PSEN1-218ENST00000556864 MCM10Q7L590 875 aa23.01■■□□□ 1.27
PSEN1-218ENST00000556864 IL17REQ8NFR9 667 aa23.01■■□□□ 1.27
PSEN1-218ENST00000556864 PALLDQ8WX93 1383 aa23.01■■□□□ 1.27
PSEN1-218ENST00000556864 RREB1Q92766 1687 aa23■■□□□ 1.27
PSEN1-218ENST00000556864 PLSCR1O15162 318 aa23■■□□□ 1.27
PSEN1-218ENST00000556864 LY75O60449 1722 aa22.99■■□□□ 1.27
PSEN1-218ENST00000556864 NCBP3Q53F19 620 aaKnown RBP22.98■■□□□ 1.27
PSEN1-218ENST00000556864 NFATC2IPQ8NCF5 419 aa22.98■■□□□ 1.27
PSEN1-218ENST00000556864 DCTN1Q14203 1278 aa22.97■■□□□ 1.27
PSEN1-218ENST00000556864 DEFB132Q7Z7B7 95 aa22.97■■□□□ 1.27
PSEN1-218ENST00000556864 NGEFQ8N5V2 710 aa22.97■■□□□ 1.27
PSEN1-218ENST00000556864 CALD1Q05682 793 aaKnown RBP22.96■■□□□ 1.27
PSEN1-218ENST00000556864 EN1Q05925 392 aaPredicted RBP22.96■■□□□ 1.27
PSEN1-218ENST00000556864 HMGB2P26583 209 aaKnown RBP22.94■■□□□ 1.26
PSEN1-218ENST00000556864 CCDC27Q2M243 656 aa22.94■■□□□ 1.26
PSEN1-218ENST00000556864 SLC27A3Q5K4L6 730 aa22.94■■□□□ 1.26
PSEN1-218ENST00000556864 TTC5Q8N0Z6 440 aa22.94■■□□□ 1.26
PSEN1-218ENST00000556864 CAMKK2Q96RR4 588 aa22.94■■□□□ 1.26
PSEN1-218ENST00000556864 ATG3Q9NT62 314 aa22.94■■□□□ 1.26
PSEN1-218ENST00000556864 TRIM35Q9UPQ4 493 aa22.94■■□□□ 1.26
PSEN1-218ENST00000556864 NUP188Q5SRE5 1749 aa22.94■■□□□ 1.26
PSEN1-218ENST00000556864 ZNF831Q5JPB2 1677 aa22.93■■□□□ 1.26
PSEN1-218ENST00000556864 THUMPD2Q9BTF0 503 aaKnown RBP22.93■■□□□ 1.26
PSEN1-218ENST00000556864 ASAP1Q9ULH1 1129 aa22.93■■□□□ 1.26
PSEN1-218ENST00000556864 UBR2Q8IWV8 1755 aa22.93■■□□□ 1.26
PSEN1-218ENST00000556864 CICQ96RK0 1608 aaPredicted RBP22.93■■□□□ 1.26
PSEN1-218ENST00000556864 KAT6BQ8WYB5 2073 aa22.93■■□□□ 1.26
PSEN1-218ENST00000556864 KCPQ6ZWJ8 1503 aa22.92■■□□□ 1.26
PSEN1-218ENST00000556864 BTBD11A6QL63 1104 aa22.92■■□□□ 1.26
PSEN1-218ENST00000556864 EZH2Q15910 746 aaKnown RBP22.92■■□□□ 1.26
PSEN1-218ENST00000556864 TXNRD1Q16881 649 aa22.92■■□□□ 1.26
PSEN1-218ENST00000556864 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
PSEN1-218ENST00000556864 TAF7Q15545 349 aaPredicted RBP22.91■■□□□ 1.26
PSEN1-218ENST00000556864 CCNL1Q9UK58 526 aaPredicted RBP22.91■■□□□ 1.26
PSEN1-218ENST00000556864 BABAM1Q9NWV8 329 aa22.9■■□□□ 1.26
PSEN1-218ENST00000556864 LOC102724428A0A0B4J2F2 783 aa22.89■■□□□ 1.25
PSEN1-218ENST00000556864 SIK1P57059 783 aa22.89■■□□□ 1.25
PSEN1-218ENST00000556864 C5P01031 1676 aa22.89■■□□□ 1.25
PSEN1-218ENST00000556864 ZNF790Q6PG37 636 aa22.88■■□□□ 1.25
PSEN1-218ENST00000556864 RBM42Q9BTD8 480 aaKnown RBP22.88■■□□□ 1.25
PSEN1-218ENST00000556864 SLC39A6Q13433 755 aa22.87■■□□□ 1.25
PSEN1-218ENST00000556864 PTCD1O75127 700 aaKnown RBP22.86■■□□□ 1.25
PSEN1-218ENST00000556864 WWC1Q8IX03 1113 aa22.86■■□□□ 1.25
PSEN1-218ENST00000556864 TSPYL4Q9UJ04 414 aa22.86■■□□□ 1.25
PSEN1-218ENST00000556864 TJP1Q07157 1748 aa22.85■■□□□ 1.25
PSEN1-218ENST00000556864 FMNL2Q96PY5 1086 aa22.85■■□□□ 1.25
PSEN1-218ENST00000556864 IFT57Q9NWB7 429 aa22.85■■□□□ 1.25
PSEN1-218ENST00000556864 IL16Q14005 1332 aa22.84■■□□□ 1.25
PSEN1-218ENST00000556864 SENP3-EIF4A1A0A087X0R7 540 aa22.84■■□□□ 1.25
PSEN1-218ENST00000556864 GNAI1P63096 354 aa22.84■■□□□ 1.25
PSEN1-218ENST00000556864 SALL2Q9Y467 1007 aaPredicted RBP22.84■■□□□ 1.25
PSEN1-218ENST00000556864 HEG1Q9ULI3 1381 aa22.84■■□□□ 1.25
PSEN1-218ENST00000556864 ATP6V1AP38606 617 aa22.83■■□□□ 1.25
PSEN1-218ENST00000556864 NBPF14Q5TI25 921 aa22.83■■□□□ 1.25
PSEN1-218ENST00000556864 VSIG10Q8N0Z9 540 aa22.83■■□□□ 1.25
PSEN1-218ENST00000556864 PROM2Q8N271 834 aa22.83■■□□□ 1.25
PSEN1-218ENST00000556864 LAS1LQ9Y4W2 734 aaKnown RBP22.83■■□□□ 1.25
PSEN1-218ENST00000556864 C4BP0C0L5 1744 aa22.82■■□□□ 1.24
PSEN1-218ENST00000556864 COL5A3P25940 1745 aaPredicted RBP22.82■■□□□ 1.24
PSEN1-218ENST00000556864 CFAP44Q96MT7 982 aa22.82■■□□□ 1.24
PSEN1-218ENST00000556864 TAF1LQ8IZX4 1826 aa22.82■■□□□ 1.24
PSEN1-218ENST00000556864 WDR63Q8IWG1 891 aa22.81■■□□□ 1.24
PSEN1-218ENST00000556864 ZNF496Q96IT1 587 aaPredicted RBP22.81■■□□□ 1.24
PSEN1-218ENST00000556864 LRRC4BQ9NT99 713 aa22.81■■□□□ 1.24
PSEN1-218ENST00000556864 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
PSEN1-218ENST00000556864 CHL1O00533 1208 aa22.8■■□□□ 1.24
PSEN1-218ENST00000556864 STK32BQ9NY57 414 aa22.8■■□□□ 1.24
PSEN1-218ENST00000556864 MIS18AQ9NYP9 233 aa22.8■■□□□ 1.24
PSEN1-218ENST00000556864 TEX13AQ9BXU3 409 aaPredicted RBP22.79■■□□□ 1.24
PSEN1-218ENST00000556864 KCNQ3O43525 872 aa22.78■■□□□ 1.24
PSEN1-218ENST00000556864 ZNF853P0CG23 659 aa22.78■■□□□ 1.24
PSEN1-218ENST00000556864 KCNQ4P56696 695 aa22.78■■□□□ 1.24
PSEN1-218ENST00000556864 ITPK1Q13572 414 aa22.78■■□□□ 1.24
PSEN1-218ENST00000556864 SLC4A9Q96Q91 983 aa22.78■■□□□ 1.24
PSEN1-218ENST00000556864 ZNF521Q96K83 1311 aa22.78■■□□□ 1.24
PSEN1-218ENST00000556864 CNTNAP4Q9C0A0 1308 aa22.78■■□□□ 1.24
PSEN1-218ENST00000556864 HNRNPUQ00839 825 aaKnown RBP eCLIP22.77■■□□□ 1.24
PSEN1-218ENST00000556864 AK7Q96M32 723 aa22.77■■□□□ 1.24
PSEN1-218ENST00000556864 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
PSEN1-218ENST00000556864 EIF4A1P60842 406 aaKnown RBP22.76■■□□□ 1.23
PSEN1-218ENST00000556864 DNAJC10Q8IXB1 793 aa22.76■■□□□ 1.23
PSEN1-218ENST00000556864 LINC00116Q8NCU8 138 aa22.76■■□□□ 1.23
PSEN1-218ENST00000556864 ANO8Q9HCE9 1232 aaPredicted RBP22.76■■□□□ 1.23
PSEN1-218ENST00000556864 MBIPQ9NS73 344 aa22.76■■□□□ 1.23
PSEN1-218ENST00000556864 QSER1Q2KHR3 1735 aa22.75■■□□□ 1.23
PSEN1-218ENST00000556864 STARD3NLO95772 234 aa22.75■■□□□ 1.23
PSEN1-218ENST00000556864 MYH16Q9H6N6 1097 aa22.75■■□□□ 1.23
PSEN1-218ENST00000556864 SLC15A2Q16348 729 aa22.73■■□□□ 1.23
PSEN1-218ENST00000556864 ZNF827Q17R98 1081 aa22.73■■□□□ 1.23
PSEN1-218ENST00000556864 AKT1S1Q96B36 256 aa22.73■■□□□ 1.23
PSEN1-218ENST00000556864 GOLGA2Q08379 1002 aa22.72■■□□□ 1.23
PSEN1-218ENST00000556864 RC3H1Q5TC82 1133 aaKnown RBP22.72■■□□□ 1.23
PSEN1-218ENST00000556864 FANCIQ9NVI1 1328 aa22.72■■□□□ 1.23
PSEN1-218ENST00000556864 CYP19A1P11511 503 aaPredicted RBP22.71■■□□□ 1.23
PSEN1-218ENST00000556864 CRKLP46109 303 aaKnown RBP22.71■■□□□ 1.23
PSEN1-218ENST00000556864 CCDC87Q9NVE4 849 aa22.71■■□□□ 1.23
PSEN1-218ENST00000556864 E9PSI1 815 aa22.7■■□□□ 1.22
PSEN1-218ENST00000556864 GNPATO15228 680 aa22.7■■□□□ 1.22
PSEN1-218ENST00000556864 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms