RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 FAM208AQ9UK61 1670 aaKnown RBP9.91□□□□□ -0.82
SCFD1-222ENST00000556768 STK25O00506 426 aa9.91□□□□□ -0.82
SCFD1-222ENST00000556768 CC2D1BQ5T0F9 858 aaKnown RBP9.91□□□□□ -0.82
SCFD1-222ENST00000556768 TMOD3Q9NYL9 352 aa9.91□□□□□ -0.82
SCFD1-222ENST00000556768 UTRNP46939 3433 aa9.9□□□□□ -0.82
SCFD1-222ENST00000556768 C1orf141Q5JVX7 400 aa9.9□□□□□ -0.82
SCFD1-222ENST00000556768 PHKG2P15735 406 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 POLD1P28340 1107 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 MTHFSP49914 203 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 KCNQ4P56696 695 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 CNGB1Q14028 1251 aaPredicted RBP9.89□□□□□ -0.83
SCFD1-222ENST00000556768 PDGFDQ9GZP0 370 aaPredicted RBP9.89□□□□□ -0.83
SCFD1-222ENST00000556768 IGSF1Q8N6C5 1336 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 PLEKHG2Q9H7P9 1386 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 PER1O15534 1290 aaPredicted RBP9.89□□□□□ -0.83
SCFD1-222ENST00000556768 DCAF8Q5TAQ9 597 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 SULT6B1Q6IMI4 303 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 FLAD1Q8NFF5 587 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 PIGBQ92521 554 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 DCAF5Q96JK2 942 aa9.89□□□□□ -0.83
SCFD1-222ENST00000556768 MYOM1P52179 1685 aa9.88□□□□□ -0.83
SCFD1-222ENST00000556768 ERVV-2B6SEH9 535 aa9.88□□□□□ -0.83
SCFD1-222ENST00000556768 ZNF827Q17R98 1081 aa9.88□□□□□ -0.83
SCFD1-222ENST00000556768 LRP5O75197 1615 aa9.88□□□□□ -0.83
SCFD1-222ENST00000556768 GOLGB1Q14789 3259 aaKnown RBP9.88□□□□□ -0.83
SCFD1-222ENST00000556768 KIF20BQ96Q89 1820 aa9.87□□□□□ -0.83
SCFD1-222ENST00000556768 PALLDQ8WX93 1383 aa9.87□□□□□ -0.83
SCFD1-222ENST00000556768 ZNF530Q6P9A1 599 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-222ENST00000556768 WNK3Q9BYP7 1800 aa9.87□□□□□ -0.83
SCFD1-222ENST00000556768 RGPD3A6NKT7 1758 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-222ENST00000556768 RGPD4Q7Z3J3 1758 aa9.87□□□□□ -0.83
SCFD1-222ENST00000556768 KAT6BQ8WYB5 2073 aa9.86□□□□□ -0.83
SCFD1-222ENST00000556768 NHSQ6T4R5 1651 aa9.86□□□□□ -0.83
SCFD1-222ENST00000556768 RREB1Q92766 1687 aa9.86□□□□□ -0.83
SCFD1-222ENST00000556768 DIAPH1O60610 1272 aaKnown RBP9.86□□□□□ -0.83
SCFD1-222ENST00000556768 PTGER2P43116 358 aa9.86□□□□□ -0.83
SCFD1-222ENST00000556768 CABP4P57796 275 aa9.86□□□□□ -0.83
SCFD1-222ENST00000556768 AK7Q96M32 723 aa9.86□□□□□ -0.83
SCFD1-222ENST00000556768 IL13P35225 146 aa9.86□□□□□ -0.83
SCFD1-222ENST00000556768 NCAPD2Q15021 1401 aa9.86□□□□□ -0.83
SCFD1-222ENST00000556768 SGIP1Q9BQI5 828 aa9.86□□□□□ -0.83
SCFD1-222ENST00000556768 SBF2Q86WG5 1849 aa9.85□□□□□ -0.83
SCFD1-222ENST00000556768 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
SCFD1-222ENST00000556768 LOC102724428A0A0B4J2F2 783 aa9.85□□□□□ -0.83
SCFD1-222ENST00000556768 ATP6V1AP38606 617 aa9.85□□□□□ -0.83
SCFD1-222ENST00000556768 SIK1P57059 783 aa9.85□□□□□ -0.83
SCFD1-222ENST00000556768 CFAP53Q96M91 514 aa9.85□□□□□ -0.83
SCFD1-222ENST00000556768 AEBP1Q8IUX7 1158 aa9.84□□□□□ -0.83
SCFD1-222ENST00000556768 SYT17Q9BSW7 474 aa9.84□□□□□ -0.83
SCFD1-222ENST00000556768 FHDC1Q9C0D6 1143 aaPredicted RBP9.84□□□□□ -0.83
SCFD1-222ENST00000556768 RYDENQ9NUL5 291 aaKnown RBP9.84□□□□□ -0.83
SCFD1-222ENST00000556768 ASAP1Q9ULH1 1129 aa9.84□□□□□ -0.83
SCFD1-222ENST00000556768 PNPLA7Q6ZV29 1317 aa9.84□□□□□ -0.83
SCFD1-222ENST00000556768 NPC1L1Q9UHC9 1359 aa9.84□□□□□ -0.83
SCFD1-222ENST00000556768 U2SURPO15042 1029 aaKnown RBP9.84□□□□□ -0.83
SCFD1-222ENST00000556768 CHRM1P11229 460 aaPredicted RBP9.84□□□□□ -0.83
SCFD1-222ENST00000556768 RBM42Q9BTD8 480 aaKnown RBP9.84□□□□□ -0.83
SCFD1-222ENST00000556768 NUDCQ9Y266 331 aa9.84□□□□□ -0.83
SCFD1-222ENST00000556768 HMOX1P09601 288 aa9.83□□□□□ -0.84
SCFD1-222ENST00000556768 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
SCFD1-222ENST00000556768 COL23A1Q86Y22 540 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-222ENST00000556768 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
SCFD1-222ENST00000556768 ATG3Q9NT62 314 aa9.82□□□□□ -0.84
SCFD1-222ENST00000556768 FAM212AQ96EL1 285 aa9.82□□□□□ -0.84
SCFD1-222ENST00000556768 DAXXQ9UER7 740 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-222ENST00000556768 KDRP35968 1356 aa9.81□□□□□ -0.84
SCFD1-222ENST00000556768 BTAF1O14981 1849 aa9.81□□□□□ -0.84
SCFD1-222ENST00000556768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.81□□□□□ -0.84
SCFD1-222ENST00000556768 GNPATO15228 680 aa9.81□□□□□ -0.84
SCFD1-222ENST00000556768 PHF14O94880 888 aa9.81□□□□□ -0.84
SCFD1-222ENST00000556768 SSFA2P28290 1259 aa9.81□□□□□ -0.84
SCFD1-222ENST00000556768 RTCBQ9Y3I0 505 aaKnown RBP9.81□□□□□ -0.84
SCFD1-222ENST00000556768 PTCD1O75127 700 aaKnown RBP9.8□□□□□ -0.84
SCFD1-222ENST00000556768 YY1P25490 414 aa9.8□□□□□ -0.84
SCFD1-222ENST00000556768 TRAPPC3LQ5T215 181 aa9.8□□□□□ -0.84
SCFD1-222ENST00000556768 STK24Q9Y6E0 443 aa9.8□□□□□ -0.84
SCFD1-222ENST00000556768 MAP2P11137 1827 aaKnown RBP9.8□□□□□ -0.84
SCFD1-222ENST00000556768 RGPD2P0DJD1 1756 aa9.8□□□□□ -0.84
SCFD1-222ENST00000556768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.79□□□□□ -0.84
SCFD1-222ENST00000556768 GPR162Q16538 588 aa9.79□□□□□ -0.84
SCFD1-222ENST00000556768 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
SCFD1-222ENST00000556768 ZFP91Q96JP5 570 aaPredicted RBP9.79□□□□□ -0.84
SCFD1-222ENST00000556768 NEFMP07197 916 aa9.79□□□□□ -0.84
SCFD1-222ENST00000556768 MSL1Q68DK7 614 aa9.79□□□□□ -0.84
SCFD1-222ENST00000556768 LINC00116Q8NCU8 138 aa9.79□□□□□ -0.84
SCFD1-222ENST00000556768 RFC4P35249 363 aa9.78□□□□□ -0.84
SCFD1-222ENST00000556768 MTHFSDQ2M296 383 aaKnown RBP9.78□□□□□ -0.84
SCFD1-222ENST00000556768 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
SCFD1-222ENST00000556768 PELP1Q8IZL8 1130 aaKnown RBP9.78□□□□□ -0.84
SCFD1-222ENST00000556768 SLC52A2Q9HAB3 445 aa9.78□□□□□ -0.84
SCFD1-222ENST00000556768 ANKRD26Q9UPS8 1709 aa9.78□□□□□ -0.84
SCFD1-222ENST00000556768 MAP3K5Q99683 1374 aa9.78□□□□□ -0.84
SCFD1-222ENST00000556768 DOT1LQ8TEK3 1739 aa9.78□□□□□ -0.84
SCFD1-222ENST00000556768 U2AF1L5P0DN76 240 aaPredicted RBP9.77□□□□□ -0.84
SCFD1-222ENST00000556768 U2AF1Q01081 240 aaKnown RBP eCLIP9.77□□□□□ -0.848e-6■■□□□ 11.7
SCFD1-222ENST00000556768 TEFQ10587 303 aa9.77□□□□□ -0.84
SCFD1-222ENST00000556768 ITPK1Q13572 414 aa9.77□□□□□ -0.84
SCFD1-222ENST00000556768 NLGN1Q8N2Q7 840 aa9.77□□□□□ -0.84
SCFD1-222ENST00000556768 GNAT3A8MTJ3 354 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms