RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 RGPD3A6NKT7 1758 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-226ENST00000556628 RGPD4Q7Z3J3 1758 aa10.68□□□□□ -0.7
HNRNPC-226ENST00000556628 NUP188Q5SRE5 1749 aa10.68□□□□□ -0.7
HNRNPC-226ENST00000556628 DPY19L2Q6NUT2 758 aa10.68□□□□□ -0.7
HNRNPC-226ENST00000556628 SPNS2Q8IVW8 549 aa10.68□□□□□ -0.7
HNRNPC-226ENST00000556628 MARCH10Q8NA82 808 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-226ENST00000556628 BCL11BQ9C0K0 894 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-226ENST00000556628 PLSCR1O15162 318 aa10.67□□□□□ -0.7
HNRNPC-226ENST00000556628 MMRN1Q13201 1228 aa10.67□□□□□ -0.7
HNRNPC-226ENST00000556628 LTV1Q96GA3 475 aaPredicted RBP10.67□□□□□ -0.7
HNRNPC-226ENST00000556628 BOLA1Q9Y3E2 137 aa10.67□□□□□ -0.7
HNRNPC-226ENST00000556628 BCL9O00512 1426 aa10.67□□□□□ -0.7
HNRNPC-226ENST00000556628 MAP3K19Q56UN5 1328 aa10.66□□□□□ -0.7
HNRNPC-226ENST00000556628 GGNBP2Q9H3C7 697 aa10.66□□□□□ -0.7
HNRNPC-226ENST00000556628 MYOM1P52179 1685 aa10.66□□□□□ -0.7
HNRNPC-226ENST00000556628 FYB1O15117 783 aa10.65□□□□□ -0.7
HNRNPC-226ENST00000556628 HOXC9P31274 260 aa10.65□□□□□ -0.7
HNRNPC-226ENST00000556628 POLR3GLQ9BT43 218 aa10.65□□□□□ -0.7
HNRNPC-226ENST00000556628 SMG6Q86US8 1419 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-226ENST00000556628 RTL1A6NKG5 1358 aa10.65□□□□□ -0.71
HNRNPC-226ENST00000556628 NHSQ6T4R5 1651 aa10.64□□□□□ -0.71
HNRNPC-226ENST00000556628 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
HNRNPC-226ENST00000556628 ACSBG1Q96GR2 724 aa10.64□□□□□ -0.71
HNRNPC-226ENST00000556628 KAT6BQ8WYB5 2073 aa10.63□□□□□ -0.71
HNRNPC-226ENST00000556628 FBLN1P23142 703 aa10.63□□□□□ -0.71
HNRNPC-226ENST00000556628 RRS1Q15050 365 aaKnown RBP10.63□□□□□ -0.71
HNRNPC-226ENST00000556628 NSD3Q9BZ95 1437 aa10.63□□□□□ -0.71
HNRNPC-226ENST00000556628 RGPD2P0DJD1 1756 aa10.62□□□□□ -0.71
HNRNPC-226ENST00000556628 DDX54Q8TDD1 881 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-226ENST00000556628 FAM205CA6NFA0 338 aa10.61□□□□□ -0.71
HNRNPC-226ENST00000556628 PTF1AQ7RTS3 328 aa10.61□□□□□ -0.71
HNRNPC-226ENST00000556628 HS3ST6Q96QI5 342 aa10.61□□□□□ -0.71
HNRNPC-226ENST00000556628 STK32BQ9NY57 414 aa10.61□□□□□ -0.71
HNRNPC-226ENST00000556628 KIF24Q5T7B8 1368 aa10.61□□□□□ -0.71
HNRNPC-226ENST00000556628 BTAF1O14981 1849 aa10.61□□□□□ -0.71
HNRNPC-226ENST00000556628 CGNL1Q0VF96 1302 aa10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 KCNQ2O43526 872 aa10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 HSPA5P11021 654 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 TATP17735 454 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 TXNRD1Q16881 649 aa10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 RAPGEF4Q8WZA2 1011 aa10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 SPON1Q9HCB6 807 aa10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 PPP1R1BQ9UD71 204 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 INSRP06213 1382 aa10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 FLT4P35916 1363 aa10.6□□□□□ -0.71
HNRNPC-226ENST00000556628 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-226ENST00000556628 PPM1GO15355 546 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-226ENST00000556628 NBPF6Q5VWK0 638 aa10.58□□□□□ -0.72
HNRNPC-226ENST00000556628 RNF25Q96BH1 459 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-226ENST00000556628 SYTL4Q96C24 671 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-226ENST00000556628 NBPF4Q96M43 638 aa10.58□□□□□ -0.72
HNRNPC-226ENST00000556628 ANO8Q9HCE9 1232 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-226ENST00000556628 DOT1LQ8TEK3 1739 aa10.58□□□□□ -0.72
HNRNPC-226ENST00000556628 ANKRD26Q9UPS8 1709 aa10.58□□□□□ -0.72
HNRNPC-226ENST00000556628 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
HNRNPC-226ENST00000556628 SLC15A2Q16348 729 aa10.57□□□□□ -0.72
HNRNPC-226ENST00000556628 HSP90AB2PQ58FF8 381 aa10.57□□□□□ -0.72
HNRNPC-226ENST00000556628 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
HNRNPC-226ENST00000556628 USHBP1Q8N6Y0 703 aa10.57□□□□□ -0.72
HNRNPC-226ENST00000556628 EMILIN1Q9Y6C2 1016 aa10.57□□□□□ -0.72
HNRNPC-226ENST00000556628 SHANK3Q9BYB0 1731 aa10.56□□□□□ -0.72
HNRNPC-226ENST00000556628 HOXB3P14651 431 aaPredicted RBP10.56□□□□□ -0.72
HNRNPC-226ENST00000556628 EFCAB3Q8N7B9 438 aa10.56□□□□□ -0.72
HNRNPC-226ENST00000556628 MEGF6O75095 1541 aa10.56□□□□□ -0.72
HNRNPC-226ENST00000556628 CASZ1Q86V15 1759 aa10.55□□□□□ -0.72
HNRNPC-226ENST00000556628 PRIM1P49642 420 aaKnown RBP10.55□□□□□ -0.72
HNRNPC-226ENST00000556628 SLC27A3Q5K4L6 730 aa10.55□□□□□ -0.72
HNRNPC-226ENST00000556628 ZNF710Q8N1W2 664 aa10.55□□□□□ -0.72
HNRNPC-226ENST00000556628 PCDH11XQ9BZA7 1347 aa10.55□□□□□ -0.72
HNRNPC-226ENST00000556628 PCDH11YQ9BZA8 1340 aa10.55□□□□□ -0.72
HNRNPC-226ENST00000556628 TNNT2P45379 298 aaPredicted RBP10.54□□□□□ -0.72
HNRNPC-226ENST00000556628 DOK7Q18PE1 504 aa10.54□□□□□ -0.72
HNRNPC-226ENST00000556628 KRTAP3-3Q9BYR6 98 aa10.54□□□□□ -0.72
HNRNPC-226ENST00000556628 KRTAP3-2Q9BYR7 98 aa10.54□□□□□ -0.72
HNRNPC-226ENST00000556628 PANK3Q9H999 370 aa10.54□□□□□ -0.72
HNRNPC-226ENST00000556628 WASHC2AQ641Q2 1341 aa10.54□□□□□ -0.72
HNRNPC-226ENST00000556628 ZBTB7AO95365 584 aa10.53□□□□□ -0.72
HNRNPC-226ENST00000556628 PLCB2Q00722 1185 aa10.53□□□□□ -0.72
HNRNPC-226ENST00000556628 NSD2O96028 1365 aa10.52□□□□□ -0.72
HNRNPC-226ENST00000556628 HMGB2P26583 209 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-226ENST00000556628 MTFR1LQ9H019 292 aa10.52□□□□□ -0.73
HNRNPC-226ENST00000556628 POLKQ9UBT6 870 aa10.52□□□□□ -0.73
HNRNPC-226ENST00000556628 SPG7Q9UQ90 795 aa10.52□□□□□ -0.73
HNRNPC-226ENST00000556628 KNSTRNQ9Y448 316 aa10.52□□□□□ -0.73
HNRNPC-226ENST00000556628 PAPPAQ13219 1627 aa10.51□□□□□ -0.73
HNRNPC-226ENST00000556628 LY75O60449 1722 aa10.51□□□□□ -0.73
HNRNPC-226ENST00000556628 PKD1L3Q7Z443 1732 aa10.51□□□□□ -0.73
HNRNPC-226ENST00000556628 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
HNRNPC-226ENST00000556628 MORC1Q86VD1 984 aa10.51□□□□□ -0.73
HNRNPC-226ENST00000556628 LRRC4BQ9NT99 713 aa10.51□□□□□ -0.73
HNRNPC-226ENST00000556628 QSER1Q2KHR3 1735 aa10.5□□□□□ -0.73
HNRNPC-226ENST00000556628 EYA1Q99502 592 aa10.5□□□□□ -0.73
HNRNPC-226ENST00000556628 PDGFDQ9GZP0 370 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-226ENST00000556628 CCNL1Q9UK58 526 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-226ENST00000556628 RIOK3O14730 519 aaKnown RBP10.49□□□□□ -0.73
HNRNPC-226ENST00000556628 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
HNRNPC-226ENST00000556628 ZNF827Q17R98 1081 aa10.49□□□□□ -0.73
HNRNPC-226ENST00000556628 MPRIPQ6WCQ1 1025 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms