RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 RTF1Q92541 710 aaKnown RBP22.66■■□□□ 1.22
PSEN1-217ENST00000556533 PTCD1O75127 700 aaKnown RBP22.65■■□□□ 1.22
PSEN1-217ENST00000556533 PLEKHF1Q96S99 279 aa22.65■■□□□ 1.22
PSEN1-217ENST00000556533 TFCP2L1Q9NZI6 479 aa22.65■■□□□ 1.22
PSEN1-217ENST00000556533 ATP6V1AP38606 617 aa22.64■■□□□ 1.21
PSEN1-217ENST00000556533 TEFQ10587 303 aa22.64■■□□□ 1.21
PSEN1-217ENST00000556533 CCDC146Q8IYE0 955 aa22.64■■□□□ 1.21
PSEN1-217ENST00000556533 ITGB4P16144 1822 aa22.64■■□□□ 1.21
PSEN1-217ENST00000556533 MCM10Q7L590 875 aa22.63■■□□□ 1.21
PSEN1-217ENST00000556533 AKT1S1Q96B36 256 aa22.63■■□□□ 1.21
PSEN1-217ENST00000556533 PDGFDQ9GZP0 370 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-217ENST00000556533 ADAMTS8Q9UP79 889 aa22.63■■□□□ 1.21
PSEN1-217ENST00000556533 SLC39A6Q13433 755 aa22.62■■□□□ 1.21
PSEN1-217ENST00000556533 DCTN1Q14203 1278 aa22.61■■□□□ 1.21
PSEN1-217ENST00000556533 NFE2L2Q16236 605 aa22.61■■□□□ 1.21
PSEN1-217ENST00000556533 CCDC184Q52MB2 194 aa22.61■■□□□ 1.21
PSEN1-217ENST00000556533 ITPK1Q13572 414 aa22.6■■□□□ 1.21
PSEN1-217ENST00000556533 MSH5O43196 834 aa22.59■■□□□ 1.21
PSEN1-217ENST00000556533 HMGB2P26583 209 aaKnown RBP22.59■■□□□ 1.21
PSEN1-217ENST00000556533 LINC00116Q8NCU8 138 aa22.59■■□□□ 1.21
PSEN1-217ENST00000556533 ZBTB7AO95365 584 aa22.58■■□□□ 1.21
PSEN1-217ENST00000556533 AK7Q96M32 723 aa22.58■■□□□ 1.21
PSEN1-217ENST00000556533 SLC4A9Q96Q91 983 aa22.58■■□□□ 1.21
PSEN1-217ENST00000556533 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
PSEN1-217ENST00000556533 MRS2Q9HD23 443 aa22.57■■□□□ 1.2
PSEN1-217ENST00000556533 LY75O60449 1722 aa22.57■■□□□ 1.2
PSEN1-217ENST00000556533 RIPK4P57078 832 aa22.56■■□□□ 1.2
PSEN1-217ENST00000556533 NEUROD2Q15784 382 aa22.56■■□□□ 1.2
PSEN1-217ENST00000556533 TTC5Q8N0Z6 440 aa22.56■■□□□ 1.2
PSEN1-217ENST00000556533 RUNDC1Q96C34 613 aa22.56■■□□□ 1.2
PSEN1-217ENST00000556533 RRP7AQ9Y3A4 280 aaKnown RBP22.56■■□□□ 1.2
PSEN1-217ENST00000556533 BTBD11A6QL63 1104 aa22.55■■□□□ 1.2
PSEN1-217ENST00000556533 ATF5Q9Y2D1 282 aaPredicted RBP22.55■■□□□ 1.2
PSEN1-217ENST00000556533 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
PSEN1-217ENST00000556533 PAPPAQ13219 1627 aa22.54■■□□□ 1.2
PSEN1-217ENST00000556533 CEMIPQ8WUJ3 1361 aa22.54■■□□□ 1.2
PSEN1-217ENST00000556533 SMIM5Q71RC9 77 aa22.54■■□□□ 1.2
PSEN1-217ENST00000556533 THUMPD2Q9BTF0 503 aaKnown RBP22.54■■□□□ 1.2
PSEN1-217ENST00000556533 PNPLA7Q6ZV29 1317 aa22.54■■□□□ 1.2
PSEN1-217ENST00000556533 TMPOP42166 694 aaKnown RBP22.53■■□□□ 1.2
PSEN1-217ENST00000556533 SPON1Q9HCB6 807 aa22.53■■□□□ 1.2
PSEN1-217ENST00000556533 MRC1P22897 1456 aa22.53■■□□□ 1.2
PSEN1-217ENST00000556533 GNPATO15228 680 aa22.52■■□□□ 1.2
PSEN1-217ENST00000556533 PHF14O94880 888 aa22.52■■□□□ 1.2
PSEN1-217ENST00000556533 KCNQ3O43525 872 aa22.51■■□□□ 1.19
PSEN1-217ENST00000556533 TAF7Q15545 349 aaPredicted RBP22.51■■□□□ 1.19
PSEN1-217ENST00000556533 ZNF790Q6PG37 636 aa22.51■■□□□ 1.19
PSEN1-217ENST00000556533 COL23A1Q86Y22 540 aaPredicted RBP22.51■■□□□ 1.19
PSEN1-217ENST00000556533 DNAJC10Q8IXB1 793 aa22.51■■□□□ 1.19
PSEN1-217ENST00000556533 MIS18AQ9NYP9 233 aa22.51■■□□□ 1.19
PSEN1-217ENST00000556533 AMIGO3Q86WK7 504 aa22.49■■□□□ 1.19
PSEN1-217ENST00000556533 ZNF496Q96IT1 587 aaPredicted RBP22.49■■□□□ 1.19
PSEN1-217ENST00000556533 ADAMTS7Q9UKP4 1686 aa22.49■■□□□ 1.19
PSEN1-217ENST00000556533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.48■■□□□ 1.19
PSEN1-217ENST00000556533 FLAD1Q8NFF5 587 aa22.48■■□□□ 1.19
PSEN1-217ENST00000556533 PNISRQ8TF01 805 aaKnown RBP22.48■■□□□ 1.19
PSEN1-217ENST00000556533 MTFR1LQ9H019 292 aa22.48■■□□□ 1.19
PSEN1-217ENST00000556533 C5P01031 1676 aa22.47■■□□□ 1.19
PSEN1-217ENST00000556533 LMOD3Q0VAK6 560 aa22.47■■□□□ 1.19
PSEN1-217ENST00000556533 FMNL2Q96PY5 1086 aa22.47■■□□□ 1.19
PSEN1-217ENST00000556533 PPP1R1BQ9UD71 204 aaPredicted RBP22.47■■□□□ 1.19
PSEN1-217ENST00000556533 SENP3-EIF4A1A0A087X0R7 540 aa22.46■■□□□ 1.19
PSEN1-217ENST00000556533 APAF1O14727 1248 aa22.46■■□□□ 1.19
PSEN1-217ENST00000556533 CRKLP46109 303 aaKnown RBP22.46■■□□□ 1.19
PSEN1-217ENST00000556533 RC3H1Q5TC82 1133 aaKnown RBP22.46■■□□□ 1.19
PSEN1-217ENST00000556533 RTCBQ9Y3I0 505 aaKnown RBP22.46■■□□□ 1.19
PSEN1-217ENST00000556533 C4BP0C0L5 1744 aa22.45■■□□□ 1.19
PSEN1-217ENST00000556533 VSIG10Q8N0Z9 540 aa22.45■■□□□ 1.18
PSEN1-217ENST00000556533 SLC16A10Q8TF71 515 aa22.45■■□□□ 1.18
PSEN1-217ENST00000556533 SSFA2P28290 1259 aa22.44■■□□□ 1.18
PSEN1-217ENST00000556533 TRAPPC3LQ5T215 181 aa22.44■■□□□ 1.18
PSEN1-217ENST00000556533 MSL1Q68DK7 614 aa22.44■■□□□ 1.18
PSEN1-217ENST00000556533 CNTNAP4Q9C0A0 1308 aa22.44■■□□□ 1.18
PSEN1-217ENST00000556533 KCPQ6ZWJ8 1503 aa22.43■■□□□ 1.18
PSEN1-217ENST00000556533 RPS6KA4O75676 772 aa22.43■■□□□ 1.18
PSEN1-217ENST00000556533 CYP19A1P11511 503 aaPredicted RBP22.43■■□□□ 1.18
PSEN1-217ENST00000556533 INTS5Q6P9B9 1019 aaKnown RBP22.43■■□□□ 1.18
PSEN1-217ENST00000556533 CCDC87Q9NVE4 849 aa22.43■■□□□ 1.18
PSEN1-217ENST00000556533 HEG1Q9ULI3 1381 aa22.42■■□□□ 1.18
PSEN1-217ENST00000556533 SRCAPQ6ZRS2 3230 aa22.42■■□□□ 1.18
PSEN1-217ENST00000556533 STARD3NLO95772 234 aa22.42■■□□□ 1.18
PSEN1-217ENST00000556533 FAM9BQ8IZU0 186 aa22.42■■□□□ 1.18
PSEN1-217ENST00000556533 TRIM35Q9UPQ4 493 aa22.42■■□□□ 1.18
PSEN1-217ENST00000556533 CASZ1Q86V15 1759 aa22.42■■□□□ 1.18
PSEN1-217ENST00000556533 PTGER2P43116 358 aa22.41■■□□□ 1.18
PSEN1-217ENST00000556533 TEX13AQ9BXU3 409 aaPredicted RBP22.41■■□□□ 1.18
PSEN1-217ENST00000556533 LAS1LQ9Y4W2 734 aaKnown RBP22.41■■□□□ 1.18
PSEN1-217ENST00000556533 TAF1LQ8IZX4 1826 aa22.41■■□□□ 1.18
PSEN1-217ENST00000556533 CANXP27824 592 aaKnown RBP22.4■■□□□ 1.18
PSEN1-217ENST00000556533 ARHGEF1Q92888 912 aaKnown RBP22.4■■□□□ 1.18
PSEN1-217ENST00000556533 TSPYL4Q9UJ04 414 aa22.4■■□□□ 1.18
PSEN1-217ENST00000556533 VIRMAQ69YN4 1812 aaKnown RBP22.4■■□□□ 1.18
PSEN1-217ENST00000556533 POLD1P28340 1107 aa22.39■■□□□ 1.17
PSEN1-217ENST00000556533 RFC4P35249 363 aa22.39■■□□□ 1.17
PSEN1-217ENST00000556533 PRAMEF22A3QJZ6 481 aa22.38■■□□□ 1.17
PSEN1-217ENST00000556533 SNRPA1P09661 255 aaKnown RBP22.38■■□□□ 1.17
PSEN1-217ENST00000556533 ZBTB1Q9Y2K1 713 aa22.37■■□□□ 1.17
PSEN1-217ENST00000556533 USP16Q9Y5T5 823 aa22.37■■□□□ 1.17
PSEN1-217ENST00000556533 ZNF831Q5JPB2 1677 aa22.36■■□□□ 1.17
PSEN1-217ENST00000556533 LRP5O75197 1615 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms