RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 VPS37CA5D8V6 355 aaPredicted RBP18.35■□□□□ 0.53
LRP1-211ENST00000556356 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
LRP1-211ENST00000556356 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
LRP1-211ENST00000556356 MAP3K2Q9Y2U5 619 aa18.35■□□□□ 0.53
LRP1-211ENST00000556356 POLR3AO14802 1390 aaPredicted RBP18.34■□□□□ 0.53
LRP1-211ENST00000556356 EDC4Q6P2E9 1401 aaKnown RBP18.34■□□□□ 0.53
LRP1-211ENST00000556356 COL17A1Q9UMD9 1497 aaPredicted RBP18.34■□□□□ 0.53
LRP1-211ENST00000556356 ANO8Q9HCE9 1232 aaPredicted RBP18.34■□□□□ 0.53
LRP1-211ENST00000556356 CWC25Q9NXE8 425 aaPredicted RBP18.34■□□□□ 0.53
LRP1-211ENST00000556356 EFCAB6Q5THR3 1501 aa18.34■□□□□ 0.53
LRP1-211ENST00000556356 CARD14Q9BXL6 1004 aa18.33■□□□□ 0.53
LRP1-211ENST00000556356 EXOC6BQ9Y2D4 811 aa18.33■□□□□ 0.53
LRP1-211ENST00000556356 EYA1Q99502 592 aa18.33■□□□□ 0.52
LRP1-211ENST00000556356 TMOD2Q9NZR1 351 aa18.33■□□□□ 0.52
LRP1-211ENST00000556356 SLC4A3P48751 1232 aa18.33■□□□□ 0.52
LRP1-211ENST00000556356 CCDC47Q96A33 483 aaKnown RBP18.33■□□□□ 0.52
LRP1-211ENST00000556356 PCDH11XQ9BZA7 1347 aa18.32■□□□□ 0.52
LRP1-211ENST00000556356 PCDH11YQ9BZA8 1340 aa18.32■□□□□ 0.52
LRP1-211ENST00000556356 MAP4K4O95819 1239 aaPredicted RBP18.32■□□□□ 0.52
LRP1-211ENST00000556356 MTHFSDQ2M296 383 aaKnown RBP18.32■□□□□ 0.52
LRP1-211ENST00000556356 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
LRP1-211ENST00000556356 TPD52L1Q16890 204 aaPredicted RBP18.32■□□□□ 0.52
LRP1-211ENST00000556356 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
LRP1-211ENST00000556356 PLEKHG1Q9ULL1 1385 aa18.31■□□□□ 0.52
LRP1-211ENST00000556356 IDH1O75874 414 aaKnown RBP18.31■□□□□ 0.52
LRP1-211ENST00000556356 SLC39A6Q13433 755 aa18.31■□□□□ 0.52
LRP1-211ENST00000556356 CCDC43Q96MW1 224 aaKnown RBP18.31■□□□□ 0.52
LRP1-211ENST00000556356 SPINK5Q9NQ38 1064 aaPredicted RBP18.31■□□□□ 0.52
LRP1-211ENST00000556356 ABCF2Q9UG63 623 aa18.31■□□□□ 0.52
LRP1-211ENST00000556356 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
LRP1-211ENST00000556356 MSNP26038 577 aaKnown RBP18.31■□□□□ 0.52
LRP1-211ENST00000556356 ZSCAN29Q8IWY8 852 aaPredicted RBP18.31■□□□□ 0.52
LRP1-211ENST00000556356 CDC5LQ99459 802 aaKnown RBP18.31■□□□□ 0.52
LRP1-211ENST00000556356 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
LRP1-211ENST00000556356 ANKRD13DQ6ZTN6 518 aa18.3■□□□□ 0.52
LRP1-211ENST00000556356 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.3■□□□□ 0.52
LRP1-211ENST00000556356 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
LRP1-211ENST00000556356 SLC5A1P13866 664 aa18.3■□□□□ 0.52
LRP1-211ENST00000556356 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
LRP1-211ENST00000556356 CCAR1Q8IX12 1150 aaKnown RBP18.3■□□□□ 0.52
LRP1-211ENST00000556356 LRRFIP2Q9Y608 721 aaKnown RBP18.3■□□□□ 0.52
LRP1-211ENST00000556356 PI4KAP2A4QPH2 592 aa18.3■□□□□ 0.52
LRP1-211ENST00000556356 FOSBP53539 338 aa18.3■□□□□ 0.52
LRP1-211ENST00000556356 PI4KAP1Q8N8J0 262 aa18.3■□□□□ 0.52
LRP1-211ENST00000556356 UGGT1Q9NYU2 1555 aa18.3■□□□□ 0.52
LRP1-211ENST00000556356 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
LRP1-211ENST00000556356 ATP5J2-PTCD1G3V325 749 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 ST5P78524 1137 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 CTNNA3Q9UI47 895 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 GCC2Q8IWJ2 1684 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 DDX49Q9Y6V7 483 aaKnown RBP18.29■□□□□ 0.52
LRP1-211ENST00000556356 TDO2P48775 406 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 NBPF6Q5VWK0 638 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 NBPF5PQ86XG9 351 aaPredicted RBP18.29■□□□□ 0.52
LRP1-211ENST00000556356 NUTM1Q86Y26 1132 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 NBPF4Q96M43 638 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 SBNO1A3KN83 1393 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 PLEKHG3A1L390 1219 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 NUCB2P80303 420 aa18.29■□□□□ 0.52
LRP1-211ENST00000556356 MAP3K5Q99683 1374 aa18.28■□□□□ 0.52
LRP1-211ENST00000556356 NLRP1Q9C000 1473 aa18.28■□□□□ 0.52
LRP1-211ENST00000556356 MCM2P49736 904 aa18.28■□□□□ 0.52
LRP1-211ENST00000556356 CHMP5Q9NZZ3 219 aa18.28■□□□□ 0.52
LRP1-211ENST00000556356 GLRX3O76003 335 aaKnown RBP18.27■□□□□ 0.52
LRP1-211ENST00000556356 NEK4P51957 841 aa18.27■□□□□ 0.52
LRP1-211ENST00000556356 NFATC2IPQ8NCF5 419 aa18.27■□□□□ 0.52
LRP1-211ENST00000556356 SKOR2Q2VWA4 1001 aaPredicted RBP18.27■□□□□ 0.51
LRP1-211ENST00000556356 AIDAQ96BJ3 306 aa18.27■□□□□ 0.51
LRP1-211ENST00000556356 HOOK1Q9UJC3 728 aaKnown RBP18.27■□□□□ 0.51
LRP1-211ENST00000556356 TMEM94Q12767 1356 aa18.27■□□□□ 0.51
LRP1-211ENST00000556356 ANXA1P04083 346 aa18.27■□□□□ 0.51
LRP1-211ENST00000556356 UBE3BQ7Z3V4 1068 aa18.27■□□□□ 0.51
LRP1-211ENST00000556356 RABEP1Q15276 862 aa18.26■□□□□ 0.51
LRP1-211ENST00000556356 BICD2Q8TD16 824 aa18.26■□□□□ 0.51
LRP1-211ENST00000556356 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
LRP1-211ENST00000556356 TRIM27P14373 513 aa18.26■□□□□ 0.51
LRP1-211ENST00000556356 XAGE3Q8WTP9 111 aa18.26■□□□□ 0.51
LRP1-211ENST00000556356 KDM6BO15054 1643 aa18.26■□□□□ 0.51
LRP1-211ENST00000556356 SETDB2Q96T68 719 aa18.26■□□□□ 0.51
LRP1-211ENST00000556356 GOLGA6L3A6NEY3 463 aa18.26■□□□□ 0.51
LRP1-211ENST00000556356 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
LRP1-211ENST00000556356 CYP46A1Q9Y6A2 500 aa18.26■□□□□ 0.51
LRP1-211ENST00000556356 C6orf229H3BNL8 230 aa18.25■□□□□ 0.51
LRP1-211ENST00000556356 PES1O00541 588 aaKnown RBP18.25■□□□□ 0.51
LRP1-211ENST00000556356 STK11IPQ8N1F8 1099 aa18.25■□□□□ 0.51
LRP1-211ENST00000556356 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
LRP1-211ENST00000556356 MX1P20591 662 aa18.25■□□□□ 0.51
LRP1-211ENST00000556356 NBPF14Q5TI25 921 aa18.25■□□□□ 0.51
LRP1-211ENST00000556356 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
LRP1-211ENST00000556356 COPS6Q7L5N1 327 aa18.24■□□□□ 0.51
LRP1-211ENST00000556356 ZNF622Q969S3 477 aaKnown RBP eCLIP18.24■□□□□ 0.51
LRP1-211ENST00000556356 TPM2P07951 284 aa18.24■□□□□ 0.51
LRP1-211ENST00000556356 LDHAL6AQ6ZMR3 332 aa18.24■□□□□ 0.51
LRP1-211ENST00000556356 ARAP3Q8WWN8 1544 aa18.24■□□□□ 0.51
LRP1-211ENST00000556356 RNMTO43148 476 aaKnown RBP18.23■□□□□ 0.51
LRP1-211ENST00000556356 ANKRD1Q15327 319 aa18.23■□□□□ 0.51
LRP1-211ENST00000556356 CWC27Q6UX04 472 aaKnown RBP18.23■□□□□ 0.51
LRP1-211ENST00000556356 RTCBQ9Y3I0 505 aaKnown RBP18.23■□□□□ 0.51
LRP1-211ENST00000556356 CCDC152Q4G0S7 254 aa18.23■□□□□ 0.51
LRP1-211ENST00000556356 DZIP1Q86YF9 867 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms