RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 STK32BQ9NY57 414 aa15.53■□□□□ 0.08
SLIRP-205ENST00000556310 PALLDQ8WX93 1383 aa15.52■□□□□ 0.08
SLIRP-205ENST00000556310 HMOX1P09601 288 aa15.52■□□□□ 0.08
SLIRP-205ENST00000556310 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.08
SLIRP-205ENST00000556310 LRRC4BQ9NT99 713 aa15.52■□□□□ 0.08
SLIRP-205ENST00000556310 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.08
SLIRP-205ENST00000556310 ADAMTS7Q9UKP4 1686 aa15.51■□□□□ 0.07
SLIRP-205ENST00000556310 SLC15A2Q16348 729 aa15.51■□□□□ 0.07
SLIRP-205ENST00000556310 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
SLIRP-205ENST00000556310 C1orf141Q5JVX7 400 aa15.5■□□□□ 0.07
SLIRP-205ENST00000556310 PIGBQ92521 554 aa15.5■□□□□ 0.07
SLIRP-205ENST00000556310 SMARCC1Q92922 1105 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-205ENST00000556310 TMOD3Q9NYL9 352 aa15.5■□□□□ 0.07
SLIRP-205ENST00000556310 CCNL1Q9UK58 526 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-205ENST00000556310 ZNF831Q5JPB2 1677 aa15.49■□□□□ 0.07
SLIRP-205ENST00000556310 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
SLIRP-205ENST00000556310 DDX10Q13206 875 aaKnown RBP15.49■□□□□ 0.07
SLIRP-205ENST00000556310 MRC1P22897 1456 aa15.48■□□□□ 0.07
SLIRP-205ENST00000556310 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
SLIRP-205ENST00000556310 ZNF827Q17R98 1081 aa15.48■□□□□ 0.07
SLIRP-205ENST00000556310 FBXO3Q9UK99 471 aa15.48■□□□□ 0.07
SLIRP-205ENST00000556310 C4BP0C0L5 1744 aa15.47■□□□□ 0.07
SLIRP-205ENST00000556310 AKAP4Q5JQC9 854 aa15.47■□□□□ 0.07
SLIRP-205ENST00000556310 AKT1S1Q96B36 256 aa15.47■□□□□ 0.07
SLIRP-205ENST00000556310 NUDCQ9Y266 331 aa15.47■□□□□ 0.07
SLIRP-205ENST00000556310 HMGB2P26583 209 aaKnown RBP15.46■□□□□ 0.07
SLIRP-205ENST00000556310 KCNQ4P56696 695 aa15.46■□□□□ 0.07
SLIRP-205ENST00000556310 RALBP1Q15311 655 aa15.45■□□□□ 0.06
SLIRP-205ENST00000556310 CICQ96RK0 1608 aaPredicted RBP15.45■□□□□ 0.06
SLIRP-205ENST00000556310 COL5A3P25940 1745 aaPredicted RBP15.45■□□□□ 0.06
SLIRP-205ENST00000556310 UBR3Q6ZT12 1888 aa15.44■□□□□ 0.06
SLIRP-205ENST00000556310 CABP4P57796 275 aa15.44■□□□□ 0.06
SLIRP-205ENST00000556310 MTHFSDQ2M296 383 aaKnown RBP15.44■□□□□ 0.06
SLIRP-205ENST00000556310 PDGFDQ9GZP0 370 aaPredicted RBP15.44■□□□□ 0.06
SLIRP-205ENST00000556310 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
SLIRP-205ENST00000556310 SPON1Q9HCB6 807 aa15.44■□□□□ 0.06
SLIRP-205ENST00000556310 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
SLIRP-205ENST00000556310 COL24A1Q17RW2 1714 aa15.43■□□□□ 0.06
SLIRP-205ENST00000556310 LOC102724428A0A0B4J2F2 783 aa15.43■□□□□ 0.06
SLIRP-205ENST00000556310 SIK1P57059 783 aa15.43■□□□□ 0.06
SLIRP-205ENST00000556310 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
SLIRP-205ENST00000556310 ATG3Q9NT62 314 aa15.43■□□□□ 0.06
SLIRP-205ENST00000556310 SIPA1L3O60292 1781 aaPredicted RBP15.43■□□□□ 0.06
SLIRP-205ENST00000556310 MAP3K5Q99683 1374 aa15.42■□□□□ 0.06
SLIRP-205ENST00000556310 U2AF1L5P0DN76 240 aaPredicted RBP15.42■□□□□ 0.06
SLIRP-205ENST00000556310 PRKAR2BP31323 418 aa15.42■□□□□ 0.06
SLIRP-205ENST00000556310 U2AF1Q01081 240 aaKnown RBP eCLIP15.42■□□□□ 0.06
SLIRP-205ENST00000556310 GAS2L2Q8NHY3 880 aa15.42■□□□□ 0.06
SLIRP-205ENST00000556310 PNPLA7Q6ZV29 1317 aa15.42■□□□□ 0.06
SLIRP-205ENST00000556310 TFCP2L1Q9NZI6 479 aa15.41■□□□□ 0.06
SLIRP-205ENST00000556310 UBR2Q8IWV8 1755 aa15.41■□□□□ 0.06
SLIRP-205ENST00000556310 MYBBP1AQ9BQG0 1328 aaKnown RBP15.41■□□□□ 0.06
SLIRP-205ENST00000556310 TJP1Q07157 1748 aa15.4■□□□□ 0.06
SLIRP-205ENST00000556310 RNMTO43148 476 aaKnown RBP15.4■□□□□ 0.06
SLIRP-205ENST00000556310 FCHSD2O94868 740 aa15.4■□□□□ 0.06
SLIRP-205ENST00000556310 ZBTB7AO95365 584 aa15.4■□□□□ 0.06
SLIRP-205ENST00000556310 MTFR1LQ9H019 292 aa15.4■□□□□ 0.06
SLIRP-205ENST00000556310 SLC52A2Q9HAB3 445 aa15.4■□□□□ 0.06
SLIRP-205ENST00000556310 NFATC2IPQ8NCF5 419 aa15.39■□□□□ 0.05
SLIRP-205ENST00000556310 LGR6Q9HBX8 967 aa15.39■□□□□ 0.05
SLIRP-205ENST00000556310 ATP6V1AP38606 617 aa15.38■□□□□ 0.05
SLIRP-205ENST00000556310 ITPK1Q13572 414 aa15.38■□□□□ 0.05
SLIRP-205ENST00000556310 SLC16A10Q8TF71 515 aa15.38■□□□□ 0.05
SLIRP-205ENST00000556310 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
SLIRP-205ENST00000556310 DLG5Q8TDM6 1919 aa15.38■□□□□ 0.05
SLIRP-205ENST00000556310 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
SLIRP-205ENST00000556310 GNAT3A8MTJ3 354 aa15.37■□□□□ 0.05
SLIRP-205ENST00000556310 LINC00116Q8NCU8 138 aa15.37■□□□□ 0.05
SLIRP-205ENST00000556310 AK7Q96M32 723 aa15.37■□□□□ 0.05
SLIRP-205ENST00000556310 CEMIPQ8WUJ3 1361 aa15.36■□□□□ 0.05
SLIRP-205ENST00000556310 PTGER2P43116 358 aa15.36■□□□□ 0.05
SLIRP-205ENST00000556310 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
SLIRP-205ENST00000556310 PPP1R1BQ9UD71 204 aaPredicted RBP15.36■□□□□ 0.05
SLIRP-205ENST00000556310 MYH14Q7Z406 1995 aaKnown RBP15.35■□□□□ 0.05
SLIRP-205ENST00000556310 FLAD1Q8NFF5 587 aa15.35■□□□□ 0.05
SLIRP-205ENST00000556310 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
SLIRP-205ENST00000556310 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
SLIRP-205ENST00000556310 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
SLIRP-205ENST00000556310 PTCD1O75127 700 aaKnown RBP15.34■□□□□ 0.05
SLIRP-205ENST00000556310 COL23A1Q86Y22 540 aaPredicted RBP15.34■□□□□ 0.05
SLIRP-205ENST00000556310 IL17REQ8NFR9 667 aa15.34■□□□□ 0.05
SLIRP-205ENST00000556310 CNTNAP4Q9C0A0 1308 aa15.34■□□□□ 0.05
SLIRP-205ENST00000556310 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
SLIRP-205ENST00000556310 NEFMP07197 916 aa15.33■□□□□ 0.04
SLIRP-205ENST00000556310 SSFA2P28290 1259 aa15.33■□□□□ 0.04
SLIRP-205ENST00000556310 TEFQ10587 303 aa15.33■□□□□ 0.04
SLIRP-205ENST00000556310 GNPATO15228 680 aa15.32■□□□□ 0.04
SLIRP-205ENST00000556310 AMIGO3Q86WK7 504 aa15.32■□□□□ 0.04
SLIRP-205ENST00000556310 PLEKHF1Q96S99 279 aa15.32■□□□□ 0.04
SLIRP-205ENST00000556310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.31■□□□□ 0.04
SLIRP-205ENST00000556310 SLC39A6Q13433 755 aa15.31■□□□□ 0.04
SLIRP-205ENST00000556310 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
SLIRP-205ENST00000556310 PNNQ9H307 717 aaKnown RBP15.31■□□□□ 0.04
SLIRP-205ENST00000556310 HTATSF1O43719 755 aaKnown RBP15.3■□□□□ 0.04
SLIRP-205ENST00000556310 PHF14O94880 888 aa15.3■□□□□ 0.04
SLIRP-205ENST00000556310 POLD1P28340 1107 aa15.3■□□□□ 0.04
SLIRP-205ENST00000556310 RTF1Q92541 710 aaKnown RBP15.3■□□□□ 0.04
SLIRP-205ENST00000556310 MAPK8IP3Q9UPT6 1336 aa15.3■□□□□ 0.04
SLIRP-205ENST00000556310 TTC5Q8N0Z6 440 aa15.29■□□□□ 0.04
SLIRP-205ENST00000556310 ARXQ96QS3 562 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms