RNA–Protein interactions for RNA: ENST00000556251.1

RAD51B-223, Transcript of RAD51 paralog B, human

TSL 4

Gene RAD51B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-223	ENST00000556251	USP47	Q96K76	1375 aa		7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	ABCA3	Q99758	1704 aa		7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	OAT	P04181	439 aa		7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	EVA1C	P58658	441 aa		7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	MDM2	Q00987	491 aa	Predicted RBP	7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	FAM98C	Q17RN3	349 aa	Known RBP	7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	FAM161A	Q3B820	660 aa		7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	FAM182B	Q5T319	152 aa		7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	GJD4	Q96KN9	370 aa	Predicted RBP	7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	RBM27	Q9P2N5	1060 aa	Known RBP	7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	ALS2	Q96Q42	1657 aa		7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	ATRN	O75882	1429 aa		7.59	□□□□□ -1.19
RAD51B-223	ENST00000556251	POLR3A	O14802	1390 aa	Predicted RBP	7.59	□□□□□ -1.2
RAD51B-223	ENST00000556251	KTN1	Q86UP2	1357 aa	Known RBP	7.59	□□□□□ -1.2
RAD51B-223	ENST00000556251	MARF1	Q9Y4F3	1742 aa	Known RBP	7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	TTC21B	Q7Z4L5	1316 aa		7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	PLCH1	Q4KWH8	1693 aa		7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	METTL3	Q86U44	580 aa	Known RBP	7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	NLRP13	Q86W25	1043 aa		7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	NME9	Q86XW9	330 aa		7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	TTC13	Q8NBP0	860 aa		7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	GPCPD1	Q9NPB8	672 aa		7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	ADGRG1	Q9Y653	693 aa		7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	USP6	P35125	1406 aa		7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	ATAD2	Q6PL18	1390 aa		7.58	□□□□□ -1.2
RAD51B-223	ENST00000556251	SLIT2	O94813	1529 aa		7.57	□□□□□ -1.2
RAD51B-223	ENST00000556251	PSD	A5PKW4	1024 aa	Predicted RBP	7.57	□□□□□ -1.2
RAD51B-223	ENST00000556251	PRSS12	P56730	875 aa		7.57	□□□□□ -1.2
RAD51B-223	ENST00000556251	PPP4R3B	Q5MIZ7	849 aa		7.57	□□□□□ -1.2
RAD51B-223	ENST00000556251	SEPT12	Q8IYM1	358 aa		7.57	□□□□□ -1.2
RAD51B-223	ENST00000556251	PXYLP1	Q8TE99	480 aa		7.57	□□□□□ -1.2
RAD51B-223	ENST00000556251	PHRF1	Q9P1Y6	1649 aa	Known RBP	7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	SNPH	O15079	494 aa		7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	GC	P02774	474 aa		7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	CSB-PGBD3	P0DP91	1061 aa		7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	FBLN1	P23142	703 aa		7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	TMF1	P82094	1093 aa		7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	CNGB1	Q14028	1251 aa	Predicted RBP	7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	VPS72	Q15906	364 aa		7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	TESK2	Q96S53	571 aa		7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	GOPC	Q9HD26	462 aa		7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251		A0A1W2PP64	1363 aa		7.56	□□□□□ -1.2
RAD51B-223	ENST00000556251	GLI3	P10071	1580 aa		7.55	□□□□□ -1.2
RAD51B-223	ENST00000556251	HSPA5	P11021	654 aa	Known RBP	7.55	□□□□□ -1.2
RAD51B-223	ENST00000556251	LARP1	Q6PKG0	1096 aa	Known RBP	7.55	□□□□□ -1.2
RAD51B-223	ENST00000556251	LTV1	Q96GA3	475 aa	Predicted RBP	7.55	□□□□□ -1.2
RAD51B-223	ENST00000556251	CDCA7L	Q96GN5	454 aa		7.55	□□□□□ -1.2
RAD51B-223	ENST00000556251	BCL2L12	Q9HB09	334 aa		7.55	□□□□□ -1.2
RAD51B-223	ENST00000556251	NRK	Q7Z2Y5	1582 aa		7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	PIK3C2A	O00443	1686 aa		7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	COL14A1	Q05707	1796 aa	Known RBP	7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	HOXB1	P14653	301 aa	Predicted RBP	7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	COL9A1	P20849	921 aa		7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	SSTR3	P32745	418 aa	Predicted RBP	7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	TOM1L2	Q6ZVM7	507 aa		7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	NLRP7	Q8WX94	980 aa		7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	TERF2IP	Q9NYB0	399 aa		7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	CRYBG1	Q9Y4K1	1723 aa		7.54	□□□□□ -1.2
RAD51B-223	ENST00000556251	USP19	O94966	1318 aa		7.53	□□□□□ -1.2
RAD51B-223	ENST00000556251	CLSPN	Q9HAW4	1339 aa		7.53	□□□□□ -1.2
RAD51B-223	ENST00000556251	NRAP	Q86VF7	1730 aa		7.53	□□□□□ -1.2
RAD51B-223	ENST00000556251	KRT27	Q7Z3Y8	459 aa		7.53	□□□□□ -1.2
RAD51B-223	ENST00000556251	RBM46	Q8TBY0	533 aa	Known RBP	7.53	□□□□□ -1.2
RAD51B-223	ENST00000556251	GGNBP2	Q9H3C7	697 aa		7.53	□□□□□ -1.2
RAD51B-223	ENST00000556251	FAM217B	Q9NTX9	383 aa	Predicted RBP	7.53	□□□□□ -1.2
RAD51B-223	ENST00000556251	CD163L1	Q9NR16	1453 aa		7.53	□□□□□ -1.2
RAD51B-223	ENST00000556251	AKAP12	Q02952	1782 aa		7.53	□□□□□ -1.2
RAD51B-223	ENST00000556251	SPATA31A5	Q5VU36	1347 aa		7.52	□□□□□ -1.2
RAD51B-223	ENST00000556251	SPATA31A7	Q8IWB4	1347 aa		7.52	□□□□□ -1.2
RAD51B-223	ENST00000556251	CDK12	Q9NYV4	1490 aa	Predicted RBP	7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	SBNO2	Q9Y2G9	1366 aa		7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	PTPRE	P23469	700 aa		7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	DEFB132	Q7Z7B7	95 aa		7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	FAM198A	Q9UFP1	575 aa		7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	AXIN2	Q9Y2T1	843 aa		7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	CPSF1	Q10570	1443 aa	Known RBP	7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	SSH2	Q76I76	1423 aa		7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	SPATA31A1	Q5TZJ5	1347 aa		7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	TTC21A	Q8NDW8	1320 aa		7.52	□□□□□ -1.21
RAD51B-223	ENST00000556251	CAMTA1	Q9Y6Y1	1673 aa		7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	BRWD3	Q6RI45	1802 aa		7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	PPP1R3G	B7ZBB8	358 aa		7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	TNNT2	P45379	298 aa	Predicted RBP	7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	SF3B2	Q13435	895 aa	Known RBP	7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	RRS1	Q15050	365 aa	Known RBP	7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	SH3D19	Q5HYK7	790 aa		7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	COG3	Q96JB2	828 aa		7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	BEGAIN	Q9BUH8	593 aa		7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	NWD2	Q9ULI1	1742 aa		7.51	□□□□□ -1.21
RAD51B-223	ENST00000556251	MON2	Q7Z3U7	1717 aa		7.5	□□□□□ -1.21
RAD51B-223	ENST00000556251	PPM1G	O15355	546 aa	Predicted RBP	7.5	□□□□□ -1.21
RAD51B-223	ENST00000556251	PDE3B	Q13370	1112 aa		7.5	□□□□□ -1.21
RAD51B-223	ENST00000556251	KCNH5	Q8NCM2	988 aa		7.5	□□□□□ -1.21
RAD51B-223	ENST00000556251	NLRP2	Q9NX02	1062 aa		7.5	□□□□□ -1.21
RAD51B-223	ENST00000556251	TSKS	Q9UJT2	592 aa		7.5	□□□□□ -1.21
RAD51B-223	ENST00000556251	SLIT3	O75094	1523 aa		7.5	□□□□□ -1.21

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