RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ZBTB7AO95365 584 aa20.22■□□□□ 0.83
ACTN1-217ENST00000556203 ATP6V1AP38606 617 aa20.22■□□□□ 0.83
ACTN1-217ENST00000556203 RBM42Q9BTD8 480 aaKnown RBP20.22■□□□□ 0.83
ACTN1-217ENST00000556203 SPON1Q9HCB6 807 aa20.22■□□□□ 0.83
ACTN1-217ENST00000556203 LRP5O75197 1615 aa20.22■□□□□ 0.83
ACTN1-217ENST00000556203 MRC1P22897 1456 aa20.21■□□□□ 0.83
ACTN1-217ENST00000556203 PNPLA7Q6ZV29 1317 aa20.21■□□□□ 0.83
ACTN1-217ENST00000556203 ITPK1Q13572 414 aa20.2■□□□□ 0.82
ACTN1-217ENST00000556203 LINC00116Q8NCU8 138 aa20.2■□□□□ 0.82
ACTN1-217ENST00000556203 IL17REQ8NFR9 667 aa20.2■□□□□ 0.82
ACTN1-217ENST00000556203 CASZ1Q86V15 1759 aa20.2■□□□□ 0.82
ACTN1-217ENST00000556203 SCN11AQ9UI33 1791 aa20.19■□□□□ 0.82
ACTN1-217ENST00000556203 NEFMP07197 916 aa20.19■□□□□ 0.82
ACTN1-217ENST00000556203 AK7Q96M32 723 aa20.19■□□□□ 0.82
ACTN1-217ENST00000556203 SLC4A9Q96Q91 983 aa20.19■□□□□ 0.82
ACTN1-217ENST00000556203 PLEKHF1Q96S99 279 aa20.19■□□□□ 0.82
ACTN1-217ENST00000556203 SRCAPQ6ZRS2 3230 aa20.18■□□□□ 0.82
ACTN1-217ENST00000556203 PTCD1O75127 700 aaKnown RBP20.18■□□□□ 0.82
ACTN1-217ENST00000556203 ATF5Q9Y2D1 282 aaPredicted RBP20.18■□□□□ 0.82
ACTN1-217ENST00000556203 C5P01031 1676 aa20.17■□□□□ 0.82
ACTN1-217ENST00000556203 ADAMTS7Q9UKP4 1686 aa20.17■□□□□ 0.82
ACTN1-217ENST00000556203 SLC39A6Q13433 755 aa20.17■□□□□ 0.82
ACTN1-217ENST00000556203 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
ACTN1-217ENST00000556203 PNNQ9H307 717 aaKnown RBP20.17■□□□□ 0.82
ACTN1-217ENST00000556203 TEFQ10587 303 aa20.16■□□□□ 0.82
ACTN1-217ENST00000556203 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
ACTN1-217ENST00000556203 MSH5O43196 834 aa20.15■□□□□ 0.82
ACTN1-217ENST00000556203 COL23A1Q86Y22 540 aaPredicted RBP20.15■□□□□ 0.82
ACTN1-217ENST00000556203 MAPK8IP3Q9UPT6 1336 aa20.15■□□□□ 0.82
ACTN1-217ENST00000556203 CEMIPQ8WUJ3 1361 aa20.15■□□□□ 0.82
ACTN1-217ENST00000556203 C4BP0C0L5 1744 aa20.15■□□□□ 0.82
ACTN1-217ENST00000556203 MCM10Q7L590 875 aa20.14■□□□□ 0.81
ACTN1-217ENST00000556203 AMIGO3Q86WK7 504 aa20.14■□□□□ 0.81
ACTN1-217ENST00000556203 GNPATO15228 680 aa20.13■□□□□ 0.81
ACTN1-217ENST00000556203 PHF14O94880 888 aa20.13■□□□□ 0.81
ACTN1-217ENST00000556203 WDR43Q15061 677 aaKnown RBP eCLIP20.13■□□□□ 0.81
ACTN1-217ENST00000556203 SLC16A10Q8TF71 515 aa20.13■□□□□ 0.81
ACTN1-217ENST00000556203 PPP1R1BQ9UD71 204 aaPredicted RBP20.13■□□□□ 0.81
ACTN1-217ENST00000556203 TAF1LQ8IZX4 1826 aa20.12■□□□□ 0.81
ACTN1-217ENST00000556203 HTATSF1O43719 755 aaKnown RBP20.12■□□□□ 0.81
ACTN1-217ENST00000556203 PTGER2P43116 358 aa20.12■□□□□ 0.81
ACTN1-217ENST00000556203 DCTN1Q14203 1278 aa20.12■□□□□ 0.81
ACTN1-217ENST00000556203 NFE2L2Q16236 605 aa20.12■□□□□ 0.81
ACTN1-217ENST00000556203 SMIM5Q71RC9 77 aa20.12■□□□□ 0.81
ACTN1-217ENST00000556203 TTC5Q8N0Z6 440 aa20.12■□□□□ 0.81
ACTN1-217ENST00000556203 FLAD1Q8NFF5 587 aa20.12■□□□□ 0.81
ACTN1-217ENST00000556203 QSER1Q2KHR3 1735 aa20.11■□□□□ 0.81
ACTN1-217ENST00000556203 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.11■□□□□ 0.81
ACTN1-217ENST00000556203 TUBGCP6Q96RT7 1819 aa20.11■□□□□ 0.81
ACTN1-217ENST00000556203 CNTNAP4Q9C0A0 1308 aa20.1■□□□□ 0.81
ACTN1-217ENST00000556203 ANP32CO43423 234 aa20.1■□□□□ 0.81
ACTN1-217ENST00000556203 SSFA2P28290 1259 aa20.1■□□□□ 0.81
ACTN1-217ENST00000556203 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
ACTN1-217ENST00000556203 BTBD11A6QL63 1104 aa20.09■□□□□ 0.81
ACTN1-217ENST00000556203 RC3H1Q5TC82 1133 aaKnown RBP20.09■□□□□ 0.81
ACTN1-217ENST00000556203 ZNF790Q6PG37 636 aa20.09■□□□□ 0.81
ACTN1-217ENST00000556203 DNAJC10Q8IXB1 793 aa20.09■□□□□ 0.81
ACTN1-217ENST00000556203 CCDC146Q8IYE0 955 aa20.09■□□□□ 0.81
ACTN1-217ENST00000556203 SGIP1Q9BQI5 828 aa20.09■□□□□ 0.81
ACTN1-217ENST00000556203 ADAMTS8Q9UP79 889 aa20.09■□□□□ 0.81
ACTN1-217ENST00000556203 ZNF831Q5JPB2 1677 aa20.09■□□□□ 0.81
ACTN1-217ENST00000556203 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.81
ACTN1-217ENST00000556203 CRKLP46109 303 aaKnown RBP20.07■□□□□ 0.8
ACTN1-217ENST00000556203 MSL1Q68DK7 614 aa20.07■□□□□ 0.8
ACTN1-217ENST00000556203 VIRMAQ69YN4 1812 aaKnown RBP20.06■□□□□ 0.8
ACTN1-217ENST00000556203 KCNQ3O43525 872 aa20.06■□□□□ 0.8
ACTN1-217ENST00000556203 POLD1P28340 1107 aa20.06■□□□□ 0.8
ACTN1-217ENST00000556203 VSIG10Q8N0Z9 540 aa20.06■□□□□ 0.8
ACTN1-217ENST00000556203 ZNF496Q96IT1 587 aaPredicted RBP20.06■□□□□ 0.8
ACTN1-217ENST00000556203 RPS6KA4O75676 772 aa20.05■□□□□ 0.8
ACTN1-217ENST00000556203 RIPK4P57078 832 aa20.05■□□□□ 0.8
ACTN1-217ENST00000556203 CCDC184Q52MB2 194 aa20.05■□□□□ 0.8
ACTN1-217ENST00000556203 RUNDC1Q96C34 613 aa20.05■□□□□ 0.8
ACTN1-217ENST00000556203 ARXQ96QS3 562 aa20.05■□□□□ 0.8
ACTN1-217ENST00000556203 THUMPD2Q9BTF0 503 aaKnown RBP20.05■□□□□ 0.8
ACTN1-217ENST00000556203 CYP19A1P11511 503 aaPredicted RBP20.04■□□□□ 0.8
ACTN1-217ENST00000556203 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
ACTN1-217ENST00000556203 TRAPPC3LQ5T215 181 aa20.04■□□□□ 0.8
ACTN1-217ENST00000556203 FMNL2Q96PY5 1086 aa20.04■□□□□ 0.8
ACTN1-217ENST00000556203 TJP1Q07157 1748 aa20.04■□□□□ 0.8
ACTN1-217ENST00000556203 UBR3Q6ZT12 1888 aa20.03■□□□□ 0.8
ACTN1-217ENST00000556203 COL5A3P25940 1745 aaPredicted RBP20.03■□□□□ 0.8
ACTN1-217ENST00000556203 ADRA2BP18089 450 aa20.03■□□□□ 0.8
ACTN1-217ENST00000556203 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
ACTN1-217ENST00000556203 INTS5Q6P9B9 1019 aaKnown RBP20.03■□□□□ 0.8
ACTN1-217ENST00000556203 RRP7AQ9Y3A4 280 aaKnown RBP20.03■□□□□ 0.8
ACTN1-217ENST00000556203 HEG1Q9ULI3 1381 aa20.03■□□□□ 0.8
ACTN1-217ENST00000556203 SIPA1L3O60292 1781 aaPredicted RBP20.03■□□□□ 0.8
ACTN1-217ENST00000556203 CICQ96RK0 1608 aaPredicted RBP20.02■□□□□ 0.8
ACTN1-217ENST00000556203 ARHGEF1Q92888 912 aaKnown RBP20.02■□□□□ 0.8
ACTN1-217ENST00000556203 CCDC87Q9NVE4 849 aa20.02■□□□□ 0.8
ACTN1-217ENST00000556203 LMOD3Q0VAK6 560 aa20.01■□□□□ 0.79
ACTN1-217ENST00000556203 NEUROD2Q15784 382 aa20.01■□□□□ 0.79
ACTN1-217ENST00000556203 MIS18AQ9NYP9 233 aa20.01■□□□□ 0.79
ACTN1-217ENST00000556203 UBR2Q8IWV8 1755 aa20■□□□□ 0.79
ACTN1-217ENST00000556203 STARD3NLO95772 234 aa20■□□□□ 0.79
ACTN1-217ENST00000556203 RFC4P35249 363 aa20■□□□□ 0.79
ACTN1-217ENST00000556203 PNISRQ8TF01 805 aaKnown RBP20■□□□□ 0.79
ACTN1-217ENST00000556203 FHDC1Q9C0D6 1143 aaPredicted RBP20■□□□□ 0.79
ACTN1-217ENST00000556203 TEX13AQ9BXU3 409 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms