RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 MMRN1Q13201 1228 aa9.34□□□□□ -0.91
PSEN1-216ENST00000556066 IP6K1Q92551 441 aa9.34□□□□□ -0.91
PSEN1-216ENST00000556066 PDGFDQ9GZP0 370 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-216ENST00000556066 NHSQ6T4R5 1651 aa9.34□□□□□ -0.91
PSEN1-216ENST00000556066 ANKRD36BQ8N2N9 1353 aa9.34□□□□□ -0.91
PSEN1-216ENST00000556066 MAP3K19Q56UN5 1328 aa9.33□□□□□ -0.92
PSEN1-216ENST00000556066 BTAF1O14981 1849 aa9.33□□□□□ -0.92
PSEN1-216ENST00000556066 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
PSEN1-216ENST00000556066 GGNBP2Q9H3C7 697 aa9.33□□□□□ -0.92
PSEN1-216ENST00000556066 PPP1R1BQ9UD71 204 aaPredicted RBP9.33□□□□□ -0.92
PSEN1-216ENST00000556066 BCL9O00512 1426 aa9.32□□□□□ -0.92
PSEN1-216ENST00000556066 PYGBP11216 843 aa9.32□□□□□ -0.92
PSEN1-216ENST00000556066 RRS1Q15050 365 aaKnown RBP9.32□□□□□ -0.92
PSEN1-216ENST00000556066 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
PSEN1-216ENST00000556066 CDCA8Q53HL2 280 aa9.32□□□□□ -0.92
PSEN1-216ENST00000556066 SPNS2Q8IVW8 549 aa9.32□□□□□ -0.92
PSEN1-216ENST00000556066 ZNF784Q8NCA9 323 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-216ENST00000556066 DDX54Q8TDD1 881 aaKnown RBP9.32□□□□□ -0.92
PSEN1-216ENST00000556066 ANO8Q9HCE9 1232 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-216ENST00000556066 FYB1O15117 783 aa9.31□□□□□ -0.92
PSEN1-216ENST00000556066 HOXC9P31274 260 aa9.31□□□□□ -0.92
PSEN1-216ENST00000556066 PTGER2P43116 358 aa9.31□□□□□ -0.92
PSEN1-216ENST00000556066 C3orf67Q6ZVT6 689 aa9.31□□□□□ -0.92
PSEN1-216ENST00000556066 POLR3GLQ9BT43 218 aa9.31□□□□□ -0.92
PSEN1-216ENST00000556066 MYOM1P52179 1685 aa9.31□□□□□ -0.92
PSEN1-216ENST00000556066 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
PSEN1-216ENST00000556066 STK32BQ9NY57 414 aa9.3□□□□□ -0.92
PSEN1-216ENST00000556066 CASZ1Q86V15 1759 aa9.29□□□□□ -0.92
PSEN1-216ENST00000556066 DOT1LQ8TEK3 1739 aa9.29□□□□□ -0.92
PSEN1-216ENST00000556066 ZBTB7AO95365 584 aa9.29□□□□□ -0.92
PSEN1-216ENST00000556066 BBXQ8WY36 941 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-216ENST00000556066 SYTL4Q96C24 671 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-216ENST00000556066 L3MBTL3Q96JM7 780 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-216ENST00000556066 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
PSEN1-216ENST00000556066 CLSPNQ9HAW4 1339 aa9.29□□□□□ -0.92
PSEN1-216ENST00000556066 MAP2P11137 1827 aaKnown RBP9.28□□□□□ -0.92
PSEN1-216ENST00000556066 SHANK3Q9BYB0 1731 aa9.28□□□□□ -0.92
PSEN1-216ENST00000556066 USHBP1Q8N6Y0 703 aa9.28□□□□□ -0.92
PSEN1-216ENST00000556066 CCER1Q8TC90 406 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-216ENST00000556066 TAOK2Q9UL54 1235 aa9.28□□□□□ -0.92
PSEN1-216ENST00000556066 SMG6Q86US8 1419 aaKnown RBP9.28□□□□□ -0.92
PSEN1-216ENST00000556066 NSD3Q9BZ95 1437 aa9.28□□□□□ -0.92
PSEN1-216ENST00000556066 CEP350Q5VT06 3117 aa9.27□□□□□ -0.92
PSEN1-216ENST00000556066 RTL1A6NKG5 1358 aa9.27□□□□□ -0.93
PSEN1-216ENST00000556066 PPM1GO15355 546 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-216ENST00000556066 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
PSEN1-216ENST00000556066 MKRN3Q13064 507 aaKnown RBP9.27□□□□□ -0.93
PSEN1-216ENST00000556066 SLC15A2Q16348 729 aa9.27□□□□□ -0.93
PSEN1-216ENST00000556066 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.93
PSEN1-216ENST00000556066 ZCRB1Q8TBF4 217 aaKnown RBP9.27□□□□□ -0.93
PSEN1-216ENST00000556066 MARVELD3Q96A59 401 aa9.27□□□□□ -0.93
PSEN1-216ENST00000556066 NBPF4Q96M43 638 aa9.27□□□□□ -0.93
PSEN1-216ENST00000556066 CARD14Q9BXL6 1004 aa9.27□□□□□ -0.93
PSEN1-216ENST00000556066 MEGF6O75095 1541 aa9.26□□□□□ -0.93
PSEN1-216ENST00000556066 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
PSEN1-216ENST00000556066 EMP3P54852 163 aa9.26□□□□□ -0.93
PSEN1-216ENST00000556066 HSP90AB2PQ58FF8 381 aa9.26□□□□□ -0.93
PSEN1-216ENST00000556066 RAPGEF4Q8WZA2 1011 aa9.26□□□□□ -0.93
PSEN1-216ENST00000556066 FLT4P35916 1363 aa9.25□□□□□ -0.93
PSEN1-216ENST00000556066 HS6ST3Q8IZP7 471 aa9.25□□□□□ -0.93
PSEN1-216ENST00000556066 SYT17Q9BSW7 474 aa9.25□□□□□ -0.93
PSEN1-216ENST00000556066 FHDC1Q9C0D6 1143 aaPredicted RBP9.25□□□□□ -0.93
PSEN1-216ENST00000556066 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
PSEN1-216ENST00000556066 INSRP06213 1382 aa9.24□□□□□ -0.93
PSEN1-216ENST00000556066 PAPPAQ13219 1627 aa9.24□□□□□ -0.93
PSEN1-216ENST00000556066 TATP17735 454 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-216ENST00000556066 KCNQ4P56696 695 aa9.24□□□□□ -0.93
PSEN1-216ENST00000556066 C1QTNF8P60827 252 aa9.24□□□□□ -0.93
PSEN1-216ENST00000556066 EIF4G2P78344 907 aaKnown RBP eCLIP9.24□□□□□ -0.93
PSEN1-216ENST00000556066 LRRC4BQ9NT99 713 aa9.24□□□□□ -0.93
PSEN1-216ENST00000556066 LY75O60449 1722 aa9.24□□□□□ -0.93
PSEN1-216ENST00000556066 CGNL1Q0VF96 1302 aa9.24□□□□□ -0.93
PSEN1-216ENST00000556066 ANKRD26Q9UPS8 1709 aa9.23□□□□□ -0.93
PSEN1-216ENST00000556066 SENP3-EIF4A1A0A087X0R7 540 aa9.23□□□□□ -0.93
PSEN1-216ENST00000556066 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-216ENST00000556066 TNNT2P45379 298 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-216ENST00000556066 ZNF827Q17R98 1081 aa9.23□□□□□ -0.93
PSEN1-216ENST00000556066 SLC27A3Q5K4L6 730 aa9.23□□□□□ -0.93
PSEN1-216ENST00000556066 ZNF467Q7Z7K2 595 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-216ENST00000556066 MTFR1LQ9H019 292 aa9.23□□□□□ -0.93
PSEN1-216ENST00000556066 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-216ENST00000556066 TUBGCP6Q96RT7 1819 aa9.23□□□□□ -0.93
PSEN1-216ENST00000556066 KIF24Q5T7B8 1368 aa9.23□□□□□ -0.93
PSEN1-216ENST00000556066 ITGB4P16144 1822 aa9.22□□□□□ -0.93
PSEN1-216ENST00000556066 HSPA5P11021 654 aaKnown RBP9.22□□□□□ -0.93
PSEN1-216ENST00000556066 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
PSEN1-216ENST00000556066 QSER1Q2KHR3 1735 aa9.22□□□□□ -0.93
PSEN1-216ENST00000556066 G3V3G9 751 aa9.21□□□□□ -0.94
PSEN1-216ENST00000556066 IFFO2Q5TF58 517 aa9.21□□□□□ -0.94
PSEN1-216ENST00000556066 TFCP2L1Q9NZI6 479 aa9.21□□□□□ -0.94
PSEN1-216ENST00000556066 CCNL1Q9UK58 526 aaPredicted RBP9.21□□□□□ -0.94
PSEN1-216ENST00000556066 PCDH11XQ9BZA7 1347 aa9.21□□□□□ -0.94
PSEN1-216ENST00000556066 PCDH11YQ9BZA8 1340 aa9.21□□□□□ -0.94
PSEN1-216ENST00000556066 NSD2O96028 1365 aa9.21□□□□□ -0.94
PSEN1-216ENST00000556066 PKD1L3Q7Z443 1732 aa9.2□□□□□ -0.94
PSEN1-216ENST00000556066 MPRIPQ6WCQ1 1025 aa9.2□□□□□ -0.94
PSEN1-216ENST00000556066 PANK3Q9H999 370 aa9.2□□□□□ -0.94
PSEN1-216ENST00000556066 C5P01031 1676 aa9.2□□□□□ -0.94
PSEN1-216ENST00000556066 TOGARAM1Q9Y4F4 1720 aa9.19□□□□□ -0.94
PSEN1-216ENST00000556066 CYP27B1O15528 508 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms