RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 KDM3BQ7LBC6 1761 aa15.59■□□□□ 0.09
APEX1-212ENST00000556054 ITGB4P16144 1822 aa15.59■□□□□ 0.09
APEX1-212ENST00000556054 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
APEX1-212ENST00000556054 TOGARAM1Q9Y4F4 1720 aa15.59■□□□□ 0.09
APEX1-212ENST00000556054 SOS1Q07889 1333 aaPredicted RBP15.58■□□□□ 0.08
APEX1-212ENST00000556054 BRWD3Q6RI45 1802 aa15.57■□□□□ 0.08
APEX1-212ENST00000556054 CABP4P57796 275 aa15.57■□□□□ 0.08
APEX1-212ENST00000556054 MBIPQ9NS73 344 aa15.57■□□□□ 0.08
APEX1-212ENST00000556054 FANCIQ9NVI1 1328 aa15.57■□□□□ 0.08
APEX1-212ENST00000556054 POTEAQ6S8J7 498 aa15.56■□□□□ 0.08
APEX1-212ENST00000556054 NFATC2IPQ8NCF5 419 aa15.56■□□□□ 0.08
APEX1-212ENST00000556054 ZNF428Q96B54 188 aa15.56■□□□□ 0.08
APEX1-212ENST00000556054 KAT6BQ8WYB5 2073 aa15.56■□□□□ 0.08
APEX1-212ENST00000556054 DOT1LQ8TEK3 1739 aa15.55■□□□□ 0.08
APEX1-212ENST00000556054 A0A0G2JS52 829 aa15.55■□□□□ 0.08
APEX1-212ENST00000556054 BTBD11A6QL63 1104 aa15.55■□□□□ 0.08
APEX1-212ENST00000556054 MYT1Q01538 1121 aa15.55■□□□□ 0.08
APEX1-212ENST00000556054 TSPYL4Q9UJ04 414 aa15.55■□□□□ 0.08
APEX1-212ENST00000556054 SBF2Q86WG5 1849 aa15.54■□□□□ 0.08
APEX1-212ENST00000556054 PAPPAQ13219 1627 aa15.54■□□□□ 0.08
APEX1-212ENST00000556054 KRT27Q7Z3Y8 459 aa15.54■□□□□ 0.08
APEX1-212ENST00000556054 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
APEX1-212ENST00000556054 HEG1Q9ULI3 1381 aa15.53■□□□□ 0.08
APEX1-212ENST00000556054 HOXB7P09629 217 aa15.53■□□□□ 0.08
APEX1-212ENST00000556054 TSR2Q969E8 191 aaKnown RBP15.53■□□□□ 0.08
APEX1-212ENST00000556054 CHMP4AQ9BY43 222 aa15.53■□□□□ 0.08
APEX1-212ENST00000556054 TMOD3Q9NYL9 352 aa15.53■□□□□ 0.08
APEX1-212ENST00000556054 UBR2Q8IWV8 1755 aa15.53■□□□□ 0.08
APEX1-212ENST00000556054 NHSQ6T4R5 1651 aa15.52■□□□□ 0.08
APEX1-212ENST00000556054 ZNF790Q6PG37 636 aa15.52■□□□□ 0.08
APEX1-212ENST00000556054 FAM196AQ6ZSG2 479 aa15.52■□□□□ 0.08
APEX1-212ENST00000556054 RGS12O14924 1447 aa15.51■□□□□ 0.07
APEX1-212ENST00000556054 CACNA1FO60840 1977 aa15.51■□□□□ 0.07
APEX1-212ENST00000556054 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
APEX1-212ENST00000556054 EXOSC9Q06265 439 aaKnown RBP15.51■□□□□ 0.07
APEX1-212ENST00000556054 PIGBQ92521 554 aa15.51■□□□□ 0.07
APEX1-212ENST00000556054 PRIM1P49642 420 aaKnown RBP15.5■□□□□ 0.07
APEX1-212ENST00000556054 MIS18AQ9NYP9 233 aa15.5■□□□□ 0.07
APEX1-212ENST00000556054 VAMP4O75379 141 aa15.49■□□□□ 0.07
APEX1-212ENST00000556054 TTC5Q8N0Z6 440 aa15.49■□□□□ 0.07
APEX1-212ENST00000556054 ZNF831Q5JPB2 1677 aa15.48■□□□□ 0.07
APEX1-212ENST00000556054 TWISTNBQ3B726 338 aaPredicted RBP15.48■□□□□ 0.07
APEX1-212ENST00000556054 ALDH1L2Q3SY69 923 aa15.48■□□□□ 0.07
APEX1-212ENST00000556054 VSIG10Q8N0Z9 540 aa15.48■□□□□ 0.07
APEX1-212ENST00000556054 C8orf58Q8NAV2 365 aa15.48■□□□□ 0.07
APEX1-212ENST00000556054 SMARCC1Q92922 1105 aaPredicted RBP15.48■□□□□ 0.07
APEX1-212ENST00000556054 FMNL2Q96PY5 1086 aa15.48■□□□□ 0.07
APEX1-212ENST00000556054 BRPF1P55201 1214 aaPredicted RBP15.47■□□□□ 0.07
APEX1-212ENST00000556054 BCL11BQ9C0K0 894 aaPredicted RBP15.47■□□□□ 0.07
APEX1-212ENST00000556054 ATG3Q9NT62 314 aa15.47■□□□□ 0.07
APEX1-212ENST00000556054 RCAN3Q9UKA8 241 aa15.47■□□□□ 0.07
APEX1-212ENST00000556054 KCPQ6ZWJ8 1503 aa15.47■□□□□ 0.07
APEX1-212ENST00000556054 CICQ96RK0 1608 aaPredicted RBP15.46■□□□□ 0.07
APEX1-212ENST00000556054 BTAF1O14981 1849 aa15.46■□□□□ 0.07
APEX1-212ENST00000556054 KCNQ3O43525 872 aa15.46■□□□□ 0.07
APEX1-212ENST00000556054 GIGYF1O75420 1035 aaPredicted RBP15.46■□□□□ 0.07
APEX1-212ENST00000556054 SNRPA1P09661 255 aaKnown RBP15.45■□□□□ 0.06
APEX1-212ENST00000556054 SLC39A6Q13433 755 aa15.45■□□□□ 0.06
APEX1-212ENST00000556054 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
APEX1-212ENST00000556054 ACSBG1Q96GR2 724 aa15.45■□□□□ 0.06
APEX1-212ENST00000556054 ZNF496Q96IT1 587 aaPredicted RBP15.45■□□□□ 0.06
APEX1-212ENST00000556054 TEX13AQ9BXU3 409 aaPredicted RBP15.45■□□□□ 0.06
APEX1-212ENST00000556054 KCNQ2O43526 872 aa15.44■□□□□ 0.06
APEX1-212ENST00000556054 RARSP54136 660 aaKnown RBP15.44■□□□□ 0.06
APEX1-212ENST00000556054 SYTL4Q96C24 671 aaPredicted RBP15.44■□□□□ 0.06
APEX1-212ENST00000556054 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
APEX1-212ENST00000556054 LAMB4A4D0S4 1761 aa15.44■□□□□ 0.06
APEX1-212ENST00000556054 HMGB2P26583 209 aaKnown RBP15.43■□□□□ 0.06
APEX1-212ENST00000556054 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
APEX1-212ENST00000556054 KRT24Q2M2I5 525 aa15.42■□□□□ 0.06
APEX1-212ENST00000556054 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
APEX1-212ENST00000556054 LY75O60449 1722 aa15.42■□□□□ 0.06
APEX1-212ENST00000556054 ERBB4Q15303 1308 aa15.42■□□□□ 0.06
APEX1-212ENST00000556054 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
APEX1-212ENST00000556054 FAM182BQ5T319 152 aa15.41■□□□□ 0.06
APEX1-212ENST00000556054 C5P01031 1676 aa15.41■□□□□ 0.06
APEX1-212ENST00000556054 PALLDQ8WX93 1383 aa15.4■□□□□ 0.06
APEX1-212ENST00000556054 SSH1Q8WYL5 1049 aa15.4■□□□□ 0.06
APEX1-212ENST00000556054 PTCD1O75127 700 aaKnown RBP15.39■□□□□ 0.05
APEX1-212ENST00000556054 HDGFL1Q5TGJ6 251 aa15.39■□□□□ 0.05
APEX1-212ENST00000556054 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.39■□□□□ 0.05
APEX1-212ENST00000556054 RGPD3A6NKT7 1758 aaPredicted RBP15.39■□□□□ 0.05
APEX1-212ENST00000556054 RGPD4Q7Z3J3 1758 aa15.39■□□□□ 0.05
APEX1-212ENST00000556054 TJP1Q07157 1748 aa15.38■□□□□ 0.05
APEX1-212ENST00000556054 LOC102724428A0A0B4J2F2 783 aa15.38■□□□□ 0.05
APEX1-212ENST00000556054 PLSCR1O15162 318 aa15.38■□□□□ 0.05
APEX1-212ENST00000556054 SIK1P57059 783 aa15.38■□□□□ 0.05
APEX1-212ENST00000556054 MRPL50Q8N5N7 158 aaKnown RBP15.38■□□□□ 0.05
APEX1-212ENST00000556054 ARHGAP45Q92619 1136 aa15.38■□□□□ 0.05
APEX1-212ENST00000556054 STK31Q9BXU1 1019 aa15.38■□□□□ 0.05
APEX1-212ENST00000556054 DBF4Q9UBU7 674 aaPredicted RBP15.38■□□□□ 0.05
APEX1-212ENST00000556054 KIF16BQ96L93 1317 aa15.38■□□□□ 0.05
APEX1-212ENST00000556054 STARD3NLO95772 234 aa15.37■□□□□ 0.05
APEX1-212ENST00000556054 PTF1AQ7RTS3 328 aa15.37■□□□□ 0.05
APEX1-212ENST00000556054 SLC4A9Q96Q91 983 aa15.37■□□□□ 0.05
APEX1-212ENST00000556054 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
APEX1-212ENST00000556054 DDX21Q9NR30 783 aaKnown RBP eCLIP15.37■□□□□ 0.05
APEX1-212ENST00000556054 SMC4Q9NTJ3 1288 aa15.37■□□□□ 0.05
APEX1-212ENST00000556054 USP16Q9Y5T5 823 aa15.37■□□□□ 0.05
APEX1-212ENST00000556054 IPO8O15397 1037 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms