RNA–Protein interactions for RNA: ENST00000555963.1

CCNB1IP1-212, Transcript of cyclin B1 interacting protein 1, humanhuman

TSL 4

Gene CCNB1IP1, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1-212ENST00000555963 U2AF1L5P0DN76 240 aaPredicted RBP13.48□□□□□ -0.25
CCNB1IP1-212ENST00000555963 U2AF1Q01081 240 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCNB1IP1-212ENST00000555963 TUBGCP6Q96RT7 1819 aa13.48□□□□□ -0.25
CCNB1IP1-212ENST00000555963 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
CCNB1IP1-212ENST00000555963 AK7Q96M32 723 aa13.47□□□□□ -0.25
CCNB1IP1-212ENST00000555963 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
CCNB1IP1-212ENST00000555963 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
CCNB1IP1-212ENST00000555963 PPP1R1BQ9UD71 204 aaPredicted RBP13.47□□□□□ -0.25
CCNB1IP1-212ENST00000555963 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.25
CCNB1IP1-212ENST00000555963 ZNF827Q17R98 1081 aa13.46□□□□□ -0.25
CCNB1IP1-212ENST00000555963 MTHFSDQ2M296 383 aaKnown RBP13.46□□□□□ -0.25
CCNB1IP1-212ENST00000555963 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
CCNB1IP1-212ENST00000555963 COL24A1Q17RW2 1714 aa13.46□□□□□ -0.25
CCNB1IP1-212ENST00000555963 UBR3Q6ZT12 1888 aa13.45□□□□□ -0.26
CCNB1IP1-212ENST00000555963 RNMTO43148 476 aaKnown RBP13.45□□□□□ -0.26
CCNB1IP1-212ENST00000555963 HTATSF1O43719 755 aaKnown RBP13.45□□□□□ -0.26
CCNB1IP1-212ENST00000555963 SSFA2P28290 1259 aa13.45□□□□□ -0.26
CCNB1IP1-212ENST00000555963 PRKAR2BP31323 418 aa13.45□□□□□ -0.26
CCNB1IP1-212ENST00000555963 ATP6V1AP38606 617 aa13.45□□□□□ -0.26
CCNB1IP1-212ENST00000555963 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
CCNB1IP1-212ENST00000555963 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
CCNB1IP1-212ENST00000555963 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
CCNB1IP1-212ENST00000555963 ADRA2BP18089 450 aa13.44□□□□□ -0.26
CCNB1IP1-212ENST00000555963 POLD1P28340 1107 aa13.44□□□□□ -0.26
CCNB1IP1-212ENST00000555963 TEFQ10587 303 aa13.44□□□□□ -0.26
CCNB1IP1-212ENST00000555963 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
CCNB1IP1-212ENST00000555963 RTF1Q92541 710 aaKnown RBP13.44□□□□□ -0.26
CCNB1IP1-212ENST00000555963 CNTNAP4Q9C0A0 1308 aa13.43□□□□□ -0.26
CCNB1IP1-212ENST00000555963 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
CCNB1IP1-212ENST00000555963 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
CCNB1IP1-212ENST00000555963 CEMIPQ8WUJ3 1361 aa13.43□□□□□ -0.26
CCNB1IP1-212ENST00000555963 UBR2Q8IWV8 1755 aa13.43□□□□□ -0.26
CCNB1IP1-212ENST00000555963 TTC5Q8N0Z6 440 aa13.42□□□□□ -0.26
CCNB1IP1-212ENST00000555963 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
CCNB1IP1-212ENST00000555963 SIPA1L3O60292 1781 aaPredicted RBP13.42□□□□□ -0.26
CCNB1IP1-212ENST00000555963 MAPK8IP3Q9UPT6 1336 aa13.41□□□□□ -0.26
CCNB1IP1-212ENST00000555963 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
CCNB1IP1-212ENST00000555963 ZBTB7AO95365 584 aa13.41□□□□□ -0.26
CCNB1IP1-212ENST00000555963 ZNF316A6NFI3 1004 aaPredicted RBP13.4□□□□□ -0.26
CCNB1IP1-212ENST00000555963 PTGER2P43116 358 aa13.4□□□□□ -0.26
CCNB1IP1-212ENST00000555963 PRKRIP1Q9H875 184 aaPredicted RBP13.4□□□□□ -0.26
CCNB1IP1-212ENST00000555963 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.26
CCNB1IP1-212ENST00000555963 KCNQ4P56696 695 aa13.39□□□□□ -0.27
CCNB1IP1-212ENST00000555963 LINC00116Q8NCU8 138 aa13.39□□□□□ -0.27
CCNB1IP1-212ENST00000555963 SGIP1Q9BQI5 828 aa13.39□□□□□ -0.27
CCNB1IP1-212ENST00000555963 TEX13AQ9BXU3 409 aaPredicted RBP13.39□□□□□ -0.27
CCNB1IP1-212ENST00000555963 TJP1Q07157 1748 aa13.39□□□□□ -0.27
CCNB1IP1-212ENST00000555963 KCPQ6ZWJ8 1503 aa13.39□□□□□ -0.27
CCNB1IP1-212ENST00000555963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.38□□□□□ -0.27
CCNB1IP1-212ENST00000555963 GNPATO15228 680 aa13.38□□□□□ -0.27
CCNB1IP1-212ENST00000555963 MSH5O43196 834 aa13.38□□□□□ -0.27
CCNB1IP1-212ENST00000555963 LMOD3Q0VAK6 560 aa13.38□□□□□ -0.27
CCNB1IP1-212ENST00000555963 ITPK1Q13572 414 aa13.38□□□□□ -0.27
CCNB1IP1-212ENST00000555963 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCNB1IP1-212ENST00000555963 ARXQ96QS3 562 aa13.38□□□□□ -0.27
CCNB1IP1-212ENST00000555963 LGR6Q9HBX8 967 aa13.38□□□□□ -0.27
CCNB1IP1-212ENST00000555963 PTCD1O75127 700 aaKnown RBP13.37□□□□□ -0.27
CCNB1IP1-212ENST00000555963 COL23A1Q86Y22 540 aaPredicted RBP13.37□□□□□ -0.27
CCNB1IP1-212ENST00000555963 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
CCNB1IP1-212ENST00000555963 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
CCNB1IP1-212ENST00000555963 PDGFDQ9GZP0 370 aaPredicted RBP13.37□□□□□ -0.27
CCNB1IP1-212ENST00000555963 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
CCNB1IP1-212ENST00000555963 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
CCNB1IP1-212ENST00000555963 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
CCNB1IP1-212ENST00000555963 TRAPPC3LQ5T215 181 aa13.36□□□□□ -0.27
CCNB1IP1-212ENST00000555963 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
CCNB1IP1-212ENST00000555963 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
CCNB1IP1-212ENST00000555963 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
CCNB1IP1-212ENST00000555963 PLEKHF1Q96S99 279 aa13.36□□□□□ -0.27
CCNB1IP1-212ENST00000555963 BTBD11A6QL63 1104 aa13.35□□□□□ -0.27
CCNB1IP1-212ENST00000555963 STARD3NLO95772 234 aa13.35□□□□□ -0.27
CCNB1IP1-212ENST00000555963 NFE2L2Q16236 605 aa13.35□□□□□ -0.27
CCNB1IP1-212ENST00000555963 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
CCNB1IP1-212ENST00000555963 HEG1Q9ULI3 1381 aa13.34□□□□□ -0.27
CCNB1IP1-212ENST00000555963 C4AP0C0L4 1744 aa13.34□□□□□ -0.27
CCNB1IP1-212ENST00000555963 PHF14O94880 888 aa13.34□□□□□ -0.27
CCNB1IP1-212ENST00000555963 CRKLP46109 303 aaKnown RBP13.34□□□□□ -0.27
CCNB1IP1-212ENST00000555963 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
CCNB1IP1-212ENST00000555963 SLC4A9Q96Q91 983 aa13.34□□□□□ -0.27
CCNB1IP1-212ENST00000555963 RFC4P35249 363 aa13.33□□□□□ -0.28
CCNB1IP1-212ENST00000555963 CCDC87Q9NVE4 849 aa13.33□□□□□ -0.28
CCNB1IP1-212ENST00000555963 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.28
CCNB1IP1-212ENST00000555963 ANP32CO43423 234 aa13.32□□□□□ -0.28
CCNB1IP1-212ENST00000555963 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
CCNB1IP1-212ENST00000555963 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
CCNB1IP1-212ENST00000555963 NPM2Q86SE8 214 aaKnown RBP13.32□□□□□ -0.28
CCNB1IP1-212ENST00000555963 A0A087WZG4 1122 aa13.31□□□□□ -0.28
CCNB1IP1-212ENST00000555963 CYP19A1P11511 503 aaPredicted RBP13.31□□□□□ -0.28
CCNB1IP1-212ENST00000555963 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
CCNB1IP1-212ENST00000555963 SYT17Q9BSW7 474 aa13.31□□□□□ -0.28
CCNB1IP1-212ENST00000555963 FHDC1Q9C0D6 1143 aaPredicted RBP13.31□□□□□ -0.28
CCNB1IP1-212ENST00000555963 CD2APQ9Y5K6 639 aa13.31□□□□□ -0.28
CCNB1IP1-212ENST00000555963 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
CCNB1IP1-212ENST00000555963 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
CCNB1IP1-212ENST00000555963 MCM10Q7L590 875 aa13.3□□□□□ -0.28
CCNB1IP1-212ENST00000555963 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
CCNB1IP1-212ENST00000555963 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
CCNB1IP1-212ENST00000555963 SOS1Q07889 1333 aaPredicted RBP13.3□□□□□ -0.28
CCNB1IP1-212ENST00000555963 COL15A1P39059 1388 aa13.3□□□□□ -0.28
CCNB1IP1-212ENST00000555963 ZPR1O75312 459 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms