RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 IL13P35225 146 aa9.36□□□□□ -0.91
CHD8-209ENST00000555935 C17orf53Q8N3J3 647 aaPredicted RBP9.36□□□□□ -0.91
CHD8-209ENST00000555935 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
CHD8-209ENST00000555935 OGFRQ9NZT2 677 aa9.36□□□□□ -0.91
CHD8-209ENST00000555935 KIAA0232Q92628 1395 aa9.36□□□□□ -0.91
CHD8-209ENST00000555935 ZBTB7CA1YPR0 619 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 FGD1P98174 961 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 GABPB1Q06547 395 aaPredicted RBP9.35□□□□□ -0.91
CHD8-209ENST00000555935 FUCA2Q9BTY2 467 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 SRCIN1Q9C0H9 1055 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 APBB1O00213 710 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 ZSCAN22P10073 491 aaPredicted RBP9.35□□□□□ -0.91
CHD8-209ENST00000555935 MPNDQ8N594 471 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 MEIS3Q99687 375 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 PALD1Q9ULE6 856 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 SALL3Q9BXA9 1300 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 ATP7BP35670 1465 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 CHMLP26374 656 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 KCNF1Q9H3M0 494 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 ANO2Q9NQ90 1003 aa9.35□□□□□ -0.91
CHD8-209ENST00000555935 MINK1Q8N4C8 1332 aaPredicted RBP9.34□□□□□ -0.91
CHD8-209ENST00000555935 AATKQ6ZMQ8 1374 aa9.34□□□□□ -0.91
CHD8-209ENST00000555935 STK26Q9P289 416 aa9.34□□□□□ -0.91
CHD8-209ENST00000555935 SPDYE4A6NLX3 237 aa9.34□□□□□ -0.91
CHD8-209ENST00000555935 FAM177BA6PVY3 158 aa9.34□□□□□ -0.91
CHD8-209ENST00000555935 U2AF2P26368 475 aaKnown RBP eCLIP9.34□□□□□ -0.91
CHD8-209ENST00000555935 PRAM1Q96QH2 718 aa9.34□□□□□ -0.91
CHD8-209ENST00000555935 PYCARDQ9ULZ3 195 aa9.34□□□□□ -0.91
CHD8-209ENST00000555935 CNPY2Q9Y2B0 182 aa9.34□□□□□ -0.91
CHD8-209ENST00000555935 CCT4P50991 539 aaKnown RBP9.33□□□□□ -0.92
CHD8-209ENST00000555935 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
CHD8-209ENST00000555935 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
CHD8-209ENST00000555935 NOL8Q76FK4 1167 aaKnown RBP9.33□□□□□ -0.92
CHD8-209ENST00000555935 CABP1Q9NZU7 370 aa9.33□□□□□ -0.92
CHD8-209ENST00000555935 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.33□□□□□ -0.92
CHD8-209ENST00000555935 AOX1Q06278 1338 aa9.33□□□□□ -0.92
CHD8-209ENST00000555935 SMTNL1A8MU46 457 aa9.33□□□□□ -0.92
CHD8-209ENST00000555935 CCDC192P0DO97 292 aa9.33□□□□□ -0.92
CHD8-209ENST00000555935 HSPA4P34932 840 aa9.33□□□□□ -0.92
CHD8-209ENST00000555935 CDK19Q9BWU1 502 aa9.33□□□□□ -0.92
CHD8-209ENST00000555935 CGNQ9P2M7 1197 aaKnown RBP9.33□□□□□ -0.92
CHD8-209ENST00000555935 STAP2Q9UGK3 403 aa9.33□□□□□ -0.92
CHD8-209ENST00000555935 CHL1O00533 1208 aa9.32□□□□□ -0.92
CHD8-209ENST00000555935 STX6O43752 255 aa9.32□□□□□ -0.92
CHD8-209ENST00000555935 F13A1P00488 732 aa9.32□□□□□ -0.92
CHD8-209ENST00000555935 NUTM2DQ5VT03 806 aaPredicted RBP9.32□□□□□ -0.92
CHD8-209ENST00000555935 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.32□□□□□ -0.92
CHD8-209ENST00000555935 LRRCC1Q9C099 1032 aa9.32□□□□□ -0.92
CHD8-209ENST00000555935 PLCB2Q00722 1185 aa9.32□□□□□ -0.92
CHD8-209ENST00000555935 NCBP1Q09161 790 aaKnown RBP9.32□□□□□ -0.92
CHD8-209ENST00000555935 GGT6Q6P531 493 aa9.32□□□□□ -0.92
CHD8-209ENST00000555935 UPF3BQ9BZI7 483 aaKnown RBP9.32□□□□□ -0.92
CHD8-209ENST00000555935 MLH3Q9UHC1 1453 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 GNAI2P04899 355 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 KRT24Q2M2I5 525 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 ZNF771Q7L3S4 317 aaPredicted RBP9.31□□□□□ -0.92
CHD8-209ENST00000555935 FAM200AQ8TCP9 573 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 CTNNA3Q9UI47 895 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 PAXBP1Q9Y5B6 917 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 EMILIN1Q9Y6C2 1016 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 FAM83GA6ND36 823 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 AP5Z1O43299 807 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 SYT1P21579 422 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 GIMAP6Q6P9H5 292 aa9.31□□□□□ -0.92
CHD8-209ENST00000555935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.31□□□□□ -0.92
CHD8-209ENST00000555935 TUBGCP6Q96RT7 1819 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 EDC4Q6P2E9 1401 aaKnown RBP9.3□□□□□ -0.92
CHD8-209ENST00000555935 POGZQ7Z3K3 1410 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 FIBPO43427 364 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
CHD8-209ENST00000555935 AEBP1Q8IUX7 1158 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 RILPL2Q969X0 211 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 SLC52A1Q9NWF4 448 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 DDX41Q9UJV9 622 aaKnown RBP9.3□□□□□ -0.92
CHD8-209ENST00000555935 LIMCH1Q9UPQ0 1083 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 SMC3Q9UQE7 1217 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 DLG5Q8TDM6 1919 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.3□□□□□ -0.92
CHD8-209ENST00000555935 SPC24Q8NBT2 197 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 TTC14Q96N46 770 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 ARHGEF10O15013 1369 aa9.3□□□□□ -0.92
CHD8-209ENST00000555935 FAM193AP78312 1265 aa9.29□□□□□ -0.92
CHD8-209ENST00000555935 DCTN1Q14203 1278 aa9.29□□□□□ -0.92
CHD8-209ENST00000555935 EXOC6BQ9Y2D4 811 aa9.29□□□□□ -0.92
CHD8-209ENST00000555935 MORC2Q9Y6X9 1032 aaPredicted RBP9.29□□□□□ -0.92
CHD8-209ENST00000555935 RAD50Q92878 1312 aa9.29□□□□□ -0.92
CHD8-209ENST00000555935 SIGLEC1Q9BZZ2 1709 aa9.29□□□□□ -0.92
CHD8-209ENST00000555935 MAP2P11137 1827 aaKnown RBP9.28□□□□□ -0.92
CHD8-209ENST00000555935 CCDC66A2RUB6 948 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 SLC4A2P04920 1241 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 GNAI3P08754 354 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 FBLN1P23142 703 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 PTGS1P23219 599 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 CCDC112Q8NEF3 446 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 BBXQ8WY36 941 aaPredicted RBP9.28□□□□□ -0.92
CHD8-209ENST00000555935 RTF1Q92541 710 aaKnown RBP9.28□□□□□ -0.92
CHD8-209ENST00000555935 DNAJC5Q9H3Z4 198 aa9.28□□□□□ -0.92
CHD8-209ENST00000555935 CFAP65Q6ZU64 1925 aaKnown RBP9.28□□□□□ -0.92
CHD8-209ENST00000555935 AK2P54819 239 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms