RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 SCTRP47872 440 aa9.12□□□□□ -0.95
ATXN3-233ENST00000555816 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
ATXN3-233ENST00000555816 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATXN3-233ENST00000555816 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
ATXN3-233ENST00000555816 KANK3Q6NY19 840 aa9.12□□□□□ -0.95
ATXN3-233ENST00000555816 TRERF1Q96PN7 1200 aa9.12□□□□□ -0.95
ATXN3-233ENST00000555816 LRRC4BQ9NT99 713 aa9.12□□□□□ -0.95
ATXN3-233ENST00000555816 CUEDC1Q9NWM3 386 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-233ENST00000555816 POU4F2Q12837 409 aa9.11□□□□□ -0.95
ATXN3-233ENST00000555816 DBN1Q16643 649 aa9.11□□□□□ -0.95
ATXN3-233ENST00000555816 RIPOR1Q6ZS17 1223 aa9.11□□□□□ -0.95
ATXN3-233ENST00000555816 TAS1R3Q7RTX0 852 aa9.11□□□□□ -0.95
ATXN3-233ENST00000555816 ESYT1Q9BSJ8 1104 aa9.11□□□□□ -0.95
ATXN3-233ENST00000555816 NSFL1CQ9UNZ2 370 aaKnown RBP9.11□□□□□ -0.95
ATXN3-233ENST00000555816 F11P03951 625 aa9.1□□□□□ -0.95
ATXN3-233ENST00000555816 USP4Q13107 963 aa9.1□□□□□ -0.95
ATXN3-233ENST00000555816 GAS6Q14393 721 aa9.1□□□□□ -0.95
ATXN3-233ENST00000555816 WHAMMQ8TF30 809 aa9.1□□□□□ -0.95
ATXN3-233ENST00000555816 TIMMDC1Q9NPL8 285 aa9.1□□□□□ -0.95
ATXN3-233ENST00000555816 WASLO00401 505 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-233ENST00000555816 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
ATXN3-233ENST00000555816 CNKSR1Q969H4 720 aa9.09□□□□□ -0.95
ATXN3-233ENST00000555816 SIRT1Q96EB6 747 aa9.09□□□□□ -0.95
ATXN3-233ENST00000555816 XAGE2Q96GT9 111 aa9.09□□□□□ -0.95
ATXN3-233ENST00000555816 ARHGEF10LQ9HCE6 1279 aa9.09□□□□□ -0.95
ATXN3-233ENST00000555816 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-233ENST00000555816 GTF2E1P29083 439 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-233ENST00000555816 LYPD4Q6UWN0 246 aa9.08□□□□□ -0.96
ATXN3-233ENST00000555816 GAS2L1Q99501 681 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-233ENST00000555816 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.96
ATXN3-233ENST00000555816 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
ATXN3-233ENST00000555816 TOP2AP11388 1531 aaKnown RBP9.07□□□□□ -0.96
ATXN3-233ENST00000555816 FOXK2Q01167 660 aa9.07□□□□□ -0.96
ATXN3-233ENST00000555816 CENPCQ03188 943 aa9.07□□□□□ -0.96
ATXN3-233ENST00000555816 LBRQ14739 615 aaKnown RBP9.07□□□□□ -0.96
ATXN3-233ENST00000555816 KCTD17Q8N5Z5 321 aa9.07□□□□□ -0.96
ATXN3-233ENST00000555816 CFHR5Q9BXR6 569 aa9.07□□□□□ -0.96
ATXN3-233ENST00000555816 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
ATXN3-233ENST00000555816 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
ATXN3-233ENST00000555816 IGHA1P01876 353 aa9.06□□□□□ -0.96
ATXN3-233ENST00000555816 PHTF2Q8N3S3 785 aa9.06□□□□□ -0.96
ATXN3-233ENST00000555816 HRH3Q9Y5N1 445 aa9.06□□□□□ -0.96
ATXN3-233ENST00000555816 DNMT3AQ9Y6K1 912 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-233ENST00000555816 IGF1RP08069 1367 aa9.06□□□□□ -0.96
ATXN3-233ENST00000555816 A0A1B0GTH6 734 aa9.05□□□□□ -0.96
ATXN3-233ENST00000555816 BCRP11274 1271 aa9.05□□□□□ -0.96
ATXN3-233ENST00000555816 GTPBP3Q969Y2 492 aaKnown RBP9.05□□□□□ -0.96
ATXN3-233ENST00000555816 CCDC85AQ96PX6 553 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-233ENST00000555816 ZSCAN10Q96SZ4 725 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-233ENST00000555816 NUCKS1Q9H1E3 243 aaKnown RBP9.05□□□□□ -0.96
ATXN3-233ENST00000555816 CHIC2Q9UKJ5 165 aa9.05□□□□□ -0.96
ATXN3-233ENST00000555816 PHF24Q9UPV7 400 aa9.05□□□□□ -0.96
ATXN3-233ENST00000555816 IL2RAP01589 272 aa9.04□□□□□ -0.96
ATXN3-233ENST00000555816 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
ATXN3-233ENST00000555816 SLFNL1Q499Z3 407 aa9.04□□□□□ -0.96
ATXN3-233ENST00000555816 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-233ENST00000555816 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
ATXN3-233ENST00000555816 PHF20L1A8MW92 1017 aa9.03□□□□□ -0.96
ATXN3-233ENST00000555816 MX2P20592 715 aa9.03□□□□□ -0.96
ATXN3-233ENST00000555816 IRS1P35568 1242 aa9.03□□□□□ -0.96
ATXN3-233ENST00000555816 GNASQ5JWF2 1037 aa9.03□□□□□ -0.96
ATXN3-233ENST00000555816 BEND7Q8N7W2 519 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-233ENST00000555816 CDCA7Q9BWT1 371 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-233ENST00000555816 TBC1D2BQ9UPU7 963 aa9.03□□□□□ -0.96
ATXN3-233ENST00000555816 SOX11P35716 441 aa9.02□□□□□ -0.97
ATXN3-233ENST00000555816 MAP2K3P46734 347 aa9.02□□□□□ -0.97
ATXN3-233ENST00000555816 MAP7D1Q3KQU3 841 aa9.02□□□□□ -0.97
ATXN3-233ENST00000555816 TMEM214Q6NUQ4 689 aaKnown RBP9.02□□□□□ -0.97
ATXN3-233ENST00000555816 DOLKQ9UPQ8 538 aa9.02□□□□□ -0.97
ATXN3-233ENST00000555816 GPR25O00155 361 aa9.01□□□□□ -0.97
ATXN3-233ENST00000555816 FHDC1Q9C0D6 1143 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-233ENST00000555816 CSB-PGBD3P0DP91 1061 aa9□□□□□ -0.97
ATXN3-233ENST00000555816 IRF5Q13568 498 aa9□□□□□ -0.97
ATXN3-233ENST00000555816 PODNQ7Z5L7 613 aa9□□□□□ -0.97
ATXN3-233ENST00000555816 PPARGC1BQ86YN6 1023 aaKnown RBP9□□□□□ -0.97
ATXN3-233ENST00000555816 RNF135Q8IUD6 432 aa9□□□□□ -0.97
ATXN3-233ENST00000555816 PGBD3Q8N328 593 aa9□□□□□ -0.97
ATXN3-233ENST00000555816 RAB6BQ9NRW1 208 aa9□□□□□ -0.97
ATXN3-233ENST00000555816 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
ATXN3-233ENST00000555816 RHBDD1Q8TEB9 315 aa8.99□□□□□ -0.97
ATXN3-233ENST00000555816 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
ATXN3-233ENST00000555816 SOGA1O94964 1423 aa8.98□□□□□ -0.97
ATXN3-233ENST00000555816 EFHC2Q5JST6 749 aa8.98□□□□□ -0.97
ATXN3-233ENST00000555816 NEDD1Q8NHV4 660 aa8.98□□□□□ -0.97
ATXN3-233ENST00000555816 ACDQ96AP0 544 aa8.98□□□□□ -0.97
ATXN3-233ENST00000555816 OIP5O43482 229 aa8.97□□□□□ -0.97
ATXN3-233ENST00000555816 C1orf216Q8TAB5 229 aa8.97□□□□□ -0.97
ATXN3-233ENST00000555816 GDF2Q9UK05 429 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-233ENST00000555816 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
ATXN3-233ENST00000555816 SUZ12Q15022 739 aaKnown RBP8.96□□□□□ -0.98
ATXN3-233ENST00000555816 C4orf17Q53FE4 359 aa8.96□□□□□ -0.98
ATXN3-233ENST00000555816 OXCT2Q9BYC2 517 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-233ENST00000555816 ETNK1Q9HBU6 452 aa8.96□□□□□ -0.98
ATXN3-233ENST00000555816 ATXN7L1Q9ULK2 861 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-233ENST00000555816 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-233ENST00000555816 PHKA2P46019 1235 aa8.95□□□□□ -0.98
ATXN3-233ENST00000555816 SEMA3FQ13275 785 aa8.95□□□□□ -0.98
ATXN3-233ENST00000555816 TSGA10IPQ3SY00 556 aa8.95□□□□□ -0.98
ATXN3-233ENST00000555816 CRISPLD1Q9H336 500 aa8.95□□□□□ -0.98
ATXN3-233ENST00000555816 RAD54L2Q9Y4B4 1467 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms