RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	PBXIP1	Q96AQ6	731 aa		7.93	□□□□□ -1.14
KTN1-222	ENST00000555506	POLM	Q9NP87	494 aa	Predicted RBP	7.93	□□□□□ -1.14
KTN1-222	ENST00000555506	ARHGEF15	O94989	841 aa		7.92	□□□□□ -1.14
KTN1-222	ENST00000555506	OXLD1	Q5BKU9	147 aa		7.92	□□□□□ -1.14
KTN1-222	ENST00000555506	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.92	□□□□□ -1.14
KTN1-222	ENST00000555506	PLPP7	Q8NBV4	271 aa		7.92	□□□□□ -1.14
KTN1-222	ENST00000555506	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.92	□□□□□ -1.14
KTN1-222	ENST00000555506	PALM3	A6NDB9	673 aa	Predicted RBP	7.91	□□□□□ -1.14
KTN1-222	ENST00000555506	RNF217	Q8TC41	542 aa		7.91	□□□□□ -1.14
KTN1-222	ENST00000555506	UCN2	Q96RP3	112 aa		7.91	□□□□□ -1.14
KTN1-222	ENST00000555506	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	7.9	□□□□□ -1.14
KTN1-222	ENST00000555506		A0A1W2PRU2	124 aa		7.9	□□□□□ -1.14
KTN1-222	ENST00000555506	PHF20L1	A8MW92	1017 aa		7.9	□□□□□ -1.14
KTN1-222	ENST00000555506	RFX1	P22670	979 aa		7.9	□□□□□ -1.14
KTN1-222	ENST00000555506	SRPK2	P78362	688 aa	Known RBP	7.9	□□□□□ -1.14
KTN1-222	ENST00000555506	CYP2U1	Q7Z449	544 aa		7.9	□□□□□ -1.14
KTN1-222	ENST00000555506	MYC	P01106	439 aa	Predicted RBP	7.89	□□□□□ -1.15
KTN1-222	ENST00000555506	MAP3K10	Q02779	954 aa		7.89	□□□□□ -1.15
KTN1-222	ENST00000555506	PDE4C	Q08493	712 aa		7.89	□□□□□ -1.15
KTN1-222	ENST00000555506	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.89	□□□□□ -1.15	2e-10	■□□□□ 9.5
KTN1-222	ENST00000555506	ESF1	Q9H501	851 aa	Known RBP	7.89	□□□□□ -1.15
KTN1-222	ENST00000555506	ARHGEF10L	Q9HCE6	1279 aa		7.89	□□□□□ -1.15
KTN1-222	ENST00000555506	RAB6B	Q9NRW1	208 aa		7.89	□□□□□ -1.15
KTN1-222	ENST00000555506	TFIP11	Q9UBB9	837 aa	Known RBP	7.89	□□□□□ -1.15
KTN1-222	ENST00000555506	MEN1	O00255	615 aa		7.88	□□□□□ -1.15
KTN1-222	ENST00000555506	SLURP2	P0DP57	97 aa		7.88	□□□□□ -1.15
KTN1-222	ENST00000555506	USP4	Q13107	963 aa		7.88	□□□□□ -1.15
KTN1-222	ENST00000555506	MAP7D1	Q3KQU3	841 aa		7.88	□□□□□ -1.15
KTN1-222	ENST00000555506	GPR161	Q8N6U8	529 aa	Known RBP	7.88	□□□□□ -1.15
KTN1-222	ENST00000555506	STAU1	O95793	577 aa	Known RBP	7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	SKI	P12755	728 aa		7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	LMOD1	P29536	600 aa	Predicted RBP	7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	KRTAP19-1	Q8IUB9	90 aa		7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	ENAM	Q9NRM1	1142 aa		7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	GNRH1	P01148	92 aa		7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	RNF144A	P50876	292 aa	Predicted RBP	7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	PTS	Q03393	145 aa		7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	CLN3	Q13286	438 aa		7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	MAFB	Q9Y5Q3	323 aa	Predicted RBP	7.87	□□□□□ -1.15
KTN1-222	ENST00000555506	IL2RA	P01589	272 aa		7.86	□□□□□ -1.15
KTN1-222	ENST00000555506	TBC1D9	Q6ZT07	1266 aa		7.86	□□□□□ -1.15
KTN1-222	ENST00000555506	ATP9B	O43861	1147 aa		7.85	□□□□□ -1.15
KTN1-222	ENST00000555506	PRICKLE2	Q7Z3G6	844 aa		7.85	□□□□□ -1.15
KTN1-222	ENST00000555506	DEPDC4	Q8N2C3	294 aa		7.85	□□□□□ -1.15
KTN1-222	ENST00000555506	NFATC2IP	Q8NCF5	419 aa		7.85	□□□□□ -1.15
KTN1-222	ENST00000555506	WHAMM	Q8TF30	809 aa		7.85	□□□□□ -1.15
KTN1-222	ENST00000555506	NANOS1	Q8WY41	292 aa	Known RBP	7.85	□□□□□ -1.15
KTN1-222	ENST00000555506	SIRT1	Q96EB6	747 aa		7.85	□□□□□ -1.15
KTN1-222	ENST00000555506	DCAF5	Q96JK2	942 aa		7.85	□□□□□ -1.15
KTN1-222	ENST00000555506	CSB-PGBD3	P0DP91	1061 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	GPC1	P35052	558 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	NCOA4	Q13772	614 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	LCE1D	Q5T752	114 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	LYSMD3	Q7Z3D4	306 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	AEBP1	Q8IUX7	1158 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	CNKSR1	Q969H4	720 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	NLRP3	Q96P20	1036 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	ESYT1	Q9BSJ8	1104 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	UST	Q9Y2C2	406 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	HRH3	Q9Y5N1	445 aa		7.84	□□□□□ -1.15
KTN1-222	ENST00000555506	SENP3-EIF4A1	A0A087X0R7	540 aa		7.83	□□□□□ -1.16
KTN1-222	ENST00000555506	USP17L5	A8MUK1	530 aa		7.83	□□□□□ -1.16
KTN1-222	ENST00000555506	RHOQ	P17081	205 aa		7.83	□□□□□ -1.16
KTN1-222	ENST00000555506	EML3	Q32P44	896 aa		7.83	□□□□□ -1.16
KTN1-222	ENST00000555506	GRIP2	Q9C0E4	1043 aa		7.83	□□□□□ -1.16
KTN1-222	ENST00000555506	ETNK1	Q9HBU6	452 aa		7.83	□□□□□ -1.16
KTN1-222	ENST00000555506	SLC35F4	A4IF30	521 aa		7.82	□□□□□ -1.16
KTN1-222	ENST00000555506	PROC	P04070	461 aa		7.82	□□□□□ -1.16
KTN1-222	ENST00000555506	SCNN1D	P51172	638 aa		7.82	□□□□□ -1.16
KTN1-222	ENST00000555506	CCDC155	Q8N6L0	562 aa		7.82	□□□□□ -1.16
KTN1-222	ENST00000555506	XAGE2	Q96GT9	111 aa		7.82	□□□□□ -1.16
KTN1-222	ENST00000555506	PCDHGA11	Q9Y5H2	935 aa		7.82	□□□□□ -1.16
KTN1-222	ENST00000555506	ATG7	O95352	703 aa		7.81	□□□□□ -1.16
KTN1-222	ENST00000555506	CENPC	Q03188	943 aa		7.81	□□□□□ -1.16
KTN1-222	ENST00000555506	SLC27A3	Q5K4L6	730 aa		7.81	□□□□□ -1.16
KTN1-222	ENST00000555506	PODN	Q7Z5L7	613 aa		7.81	□□□□□ -1.16
KTN1-222	ENST00000555506	LZTS3	O60299	673 aa	Predicted RBP	7.81	□□□□□ -1.16
KTN1-222	ENST00000555506	GDF10	P55107	478 aa		7.81	□□□□□ -1.16
KTN1-222	ENST00000555506	POU4F2	Q12837	409 aa		7.81	□□□□□ -1.16
KTN1-222	ENST00000555506	BEND7	Q8N7W2	519 aa	Predicted RBP	7.81	□□□□□ -1.16
KTN1-222	ENST00000555506	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.81	□□□□□ -1.16
KTN1-222	ENST00000555506	USP17L3	A6NCW0	530 aa		7.8	□□□□□ -1.16
KTN1-222	ENST00000555506	USP17L4	A6NCW7	530 aa		7.8	□□□□□ -1.16
KTN1-222	ENST00000555506	INHA	P05111	366 aa		7.8	□□□□□ -1.16
KTN1-222	ENST00000555506	ESCO1	Q5FWF5	840 aa		7.8	□□□□□ -1.16
KTN1-222	ENST00000555506	USP17L2	Q6R6M4	530 aa		7.8	□□□□□ -1.16
KTN1-222	ENST00000555506	USP17L1	Q7RTZ2	530 aa		7.8	□□□□□ -1.16
KTN1-222	ENST00000555506	NOD1	Q9Y239	953 aa		7.8	□□□□□ -1.16
KTN1-222	ENST00000555506	TMEM229A	B2RXF0	380 aa		7.79	□□□□□ -1.16
KTN1-222	ENST00000555506	ITGB2	P05107	769 aa		7.79	□□□□□ -1.16
KTN1-222	ENST00000555506	GTF2I	P78347	998 aa		7.79	□□□□□ -1.16
KTN1-222	ENST00000555506	CDCA8	Q53HL2	280 aa		7.79	□□□□□ -1.16
KTN1-222	ENST00000555506	RNFT1	Q5M7Z0	435 aa		7.79	□□□□□ -1.16
KTN1-222	ENST00000555506	KANK4	Q5T7N3	995 aa	Predicted RBP	7.79	□□□□□ -1.16
KTN1-222	ENST00000555506	PLEKHM2	Q8IWE5	1019 aa		7.79	□□□□□ -1.16
KTN1-222	ENST00000555506	VRTN	Q9H8Y1	702 aa		7.79	□□□□□ -1.16
KTN1-222	ENST00000555506	SPATA31C2	B4DYI2	1134 aa		7.78	□□□□□ -1.16
KTN1-222	ENST00000555506	BRD1	O95696	1058 aa		7.78	□□□□□ -1.16
KTN1-222	ENST00000555506	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.78	□□□□□ -1.16
KTN1-222	ENST00000555506	CCDC9	Q9Y3X0	531 aa	Known RBP	7.78	□□□□□ -1.16

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