RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 TOGARAM1Q9Y4F4 1720 aa18.69■□□□□ 0.58
CHD8-208ENST00000555301 EP400Q96L91 3159 aa18.67■□□□□ 0.58
CHD8-208ENST00000555301 BTBD11A6QL63 1104 aa18.67■□□□□ 0.58
CHD8-208ENST00000555301 PLSCR1O15162 318 aa18.67■□□□□ 0.58
CHD8-208ENST00000555301 BAG6P46379 1132 aa18.67■□□□□ 0.58
CHD8-208ENST00000555301 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
CHD8-208ENST00000555301 SCN11AQ9UI33 1791 aa18.66■□□□□ 0.58
CHD8-208ENST00000555301 WDR63Q8IWG1 891 aa18.66■□□□□ 0.58
CHD8-208ENST00000555301 ATG3Q9NT62 314 aa18.66■□□□□ 0.58
CHD8-208ENST00000555301 HNRNPUQ00839 825 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHD8-208ENST00000555301 TTC5Q8N0Z6 440 aa18.65■□□□□ 0.58
CHD8-208ENST00000555301 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
CHD8-208ENST00000555301 ZNF790Q6PG37 636 aa18.64■□□□□ 0.57
CHD8-208ENST00000555301 CFAP44Q96MT7 982 aa18.64■□□□□ 0.57
CHD8-208ENST00000555301 IFT57Q9NWB7 429 aa18.64■□□□□ 0.57
CHD8-208ENST00000555301 IL16Q14005 1332 aa18.64■□□□□ 0.57
CHD8-208ENST00000555301 PALLDQ8WX93 1383 aa18.64■□□□□ 0.57
CHD8-208ENST00000555301 SBF2Q86WG5 1849 aa18.63■□□□□ 0.57
CHD8-208ENST00000555301 GNAI1P63096 354 aa18.63■□□□□ 0.57
CHD8-208ENST00000555301 TSPYL4Q9UJ04 414 aa18.63■□□□□ 0.57
CHD8-208ENST00000555301 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
CHD8-208ENST00000555301 CHL1O00533 1208 aa18.62■□□□□ 0.57
CHD8-208ENST00000555301 SLC39A6Q13433 755 aa18.62■□□□□ 0.57
CHD8-208ENST00000555301 LAS1LQ9Y4W2 734 aaKnown RBP18.62■□□□□ 0.57
CHD8-208ENST00000555301 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
CHD8-208ENST00000555301 ZNF853P0CG23 659 aa18.61■□□□□ 0.57
CHD8-208ENST00000555301 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
CHD8-208ENST00000555301 HMGB2P26583 209 aaKnown RBP18.6■□□□□ 0.57
CHD8-208ENST00000555301 EN1Q05925 392 aaPredicted RBP18.6■□□□□ 0.57
CHD8-208ENST00000555301 SLC27A3Q5K4L6 730 aa18.6■□□□□ 0.57
CHD8-208ENST00000555301 CAMKK2Q96RR4 588 aa18.6■□□□□ 0.57
CHD8-208ENST00000555301 TNS1Q9HBL0 1735 aaKnown RBP18.6■□□□□ 0.57
CHD8-208ENST00000555301 BTAF1O14981 1849 aa18.59■□□□□ 0.57
CHD8-208ENST00000555301 ITGB4P16144 1822 aa18.59■□□□□ 0.57
CHD8-208ENST00000555301 LOC102724428A0A0B4J2F2 783 aa18.59■□□□□ 0.57
CHD8-208ENST00000555301 PTCD1O75127 700 aaKnown RBP18.59■□□□□ 0.57
CHD8-208ENST00000555301 SIK1P57059 783 aa18.59■□□□□ 0.57
CHD8-208ENST00000555301 GOLGA2Q08379 1002 aa18.59■□□□□ 0.57
CHD8-208ENST00000555301 DEFB132Q7Z7B7 95 aa18.59■□□□□ 0.57
CHD8-208ENST00000555301 FMNL2Q96PY5 1086 aa18.59■□□□□ 0.57
CHD8-208ENST00000555301 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
CHD8-208ENST00000555301 SOCS7O14512 581 aa18.58■□□□□ 0.56
CHD8-208ENST00000555301 TXNRD1Q16881 649 aa18.58■□□□□ 0.56
CHD8-208ENST00000555301 VSIG10Q8N0Z9 540 aa18.58■□□□□ 0.56
CHD8-208ENST00000555301 CCNL1Q9UK58 526 aaPredicted RBP18.58■□□□□ 0.56
CHD8-208ENST00000555301 KCNQ3O43525 872 aa18.57■□□□□ 0.56
CHD8-208ENST00000555301 EZH2Q15910 746 aaKnown RBP18.57■□□□□ 0.56
CHD8-208ENST00000555301 ZNF496Q96IT1 587 aaPredicted RBP18.57■□□□□ 0.56
CHD8-208ENST00000555301 MYH16Q9H6N6 1097 aa18.57■□□□□ 0.56
CHD8-208ENST00000555301 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
CHD8-208ENST00000555301 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
CHD8-208ENST00000555301 SIPA1L3O60292 1781 aaPredicted RBP18.56■□□□□ 0.56
CHD8-208ENST00000555301 E9PSI1 815 aa18.56■□□□□ 0.56
CHD8-208ENST00000555301 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
CHD8-208ENST00000555301 EIF4A1P60842 406 aaKnown RBP18.56■□□□□ 0.56
CHD8-208ENST00000555301 PROM2Q8N271 834 aa18.56■□□□□ 0.56
CHD8-208ENST00000555301 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
CHD8-208ENST00000555301 KCPQ6ZWJ8 1503 aa18.55■□□□□ 0.56
CHD8-208ENST00000555301 PAPPAQ13219 1627 aa18.55■□□□□ 0.56
CHD8-208ENST00000555301 SNRPA1P09661 255 aaKnown RBP18.54■□□□□ 0.56
CHD8-208ENST00000555301 TEX13AQ9BXU3 409 aaPredicted RBP18.54■□□□□ 0.56
CHD8-208ENST00000555301 RGPD3A6NKT7 1758 aaPredicted RBP18.53■□□□□ 0.56
CHD8-208ENST00000555301 RGPD4Q7Z3J3 1758 aa18.53■□□□□ 0.56
CHD8-208ENST00000555301 KAT6BQ8WYB5 2073 aa18.53■□□□□ 0.56
CHD8-208ENST00000555301 SLC4A9Q96Q91 983 aa18.53■□□□□ 0.56
CHD8-208ENST00000555301 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
CHD8-208ENST00000555301 LRRC4BQ9NT99 713 aa18.53■□□□□ 0.56
CHD8-208ENST00000555301 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
CHD8-208ENST00000555301 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
CHD8-208ENST00000555301 SLFN5Q08AF3 891 aa18.52■□□□□ 0.56
CHD8-208ENST00000555301 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
CHD8-208ENST00000555301 GIGYF1O75420 1035 aaPredicted RBP18.51■□□□□ 0.55
CHD8-208ENST00000555301 ITPK1Q13572 414 aa18.51■□□□□ 0.55
CHD8-208ENST00000555301 KDM3BQ7LBC6 1761 aa18.5■□□□□ 0.55
CHD8-208ENST00000555301 LY75O60449 1722 aa18.5■□□□□ 0.55
CHD8-208ENST00000555301 STARD3NLO95772 234 aa18.5■□□□□ 0.55
CHD8-208ENST00000555301 HOXB7P09629 217 aa18.5■□□□□ 0.55
CHD8-208ENST00000555301 KCNQ4P56696 695 aa18.5■□□□□ 0.55
CHD8-208ENST00000555301 DNAJC10Q8IXB1 793 aa18.5■□□□□ 0.55
CHD8-208ENST00000555301 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
CHD8-208ENST00000555301 CDCA7LQ96GN5 454 aa18.49■□□□□ 0.55
CHD8-208ENST00000555301 YTHDC1Q96MU7 727 aaKnown RBP18.49■□□□□ 0.55
CHD8-208ENST00000555301 UBR2Q8IWV8 1755 aa18.49■□□□□ 0.55
CHD8-208ENST00000555301 ZNF831Q5JPB2 1677 aa18.48■□□□□ 0.55
CHD8-208ENST00000555301 NBPF14Q5TI25 921 aa18.48■□□□□ 0.55
CHD8-208ENST00000555301 TRMT2AQ8IZ69 625 aaKnown RBP18.48■□□□□ 0.55
CHD8-208ENST00000555301 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
CHD8-208ENST00000555301 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
CHD8-208ENST00000555301 CYP19A1P11511 503 aaPredicted RBP18.47■□□□□ 0.55
CHD8-208ENST00000555301 KRT24Q2M2I5 525 aa18.47■□□□□ 0.55
CHD8-208ENST00000555301 RC3H1Q5TC82 1133 aaKnown RBP18.47■□□□□ 0.55
CHD8-208ENST00000555301 DUSP27Q5VZP5 1158 aa18.47■□□□□ 0.55
CHD8-208ENST00000555301 USP16Q9Y5T5 823 aa18.47■□□□□ 0.55
CHD8-208ENST00000555301 CNTNAP4Q9C0A0 1308 aa18.47■□□□□ 0.55
CHD8-208ENST00000555301 PRAMEF22A3QJZ6 481 aa18.46■□□□□ 0.55
CHD8-208ENST00000555301 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
CHD8-208ENST00000555301 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
CHD8-208ENST00000555301 CICQ96RK0 1608 aaPredicted RBP18.45■□□□□ 0.54
CHD8-208ENST00000555301 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
CHD8-208ENST00000555301 AK7Q96M32 723 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms