RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 DDX54Q8TDD1 881 aaKnown RBP11.38□□□□□ -0.59
TRIM9-204ENST00000555170 KDRP35968 1356 aa11.38□□□□□ -0.59
TRIM9-204ENST00000555170 PPP2R1AP30153 589 aa11.37□□□□□ -0.59
TRIM9-204ENST00000555170 PRIM1P49642 420 aaKnown RBP11.37□□□□□ -0.59
TRIM9-204ENST00000555170 ZCRB1Q8TBF4 217 aaKnown RBP11.37□□□□□ -0.59
TRIM9-204ENST00000555170 SYTL4Q96C24 671 aaPredicted RBP11.37□□□□□ -0.59
TRIM9-204ENST00000555170 NMRK2Q9NPI5 230 aa11.37□□□□□ -0.59
TRIM9-204ENST00000555170 LY75O60449 1722 aa11.36□□□□□ -0.59
TRIM9-204ENST00000555170 CCNL1Q9UK58 526 aaPredicted RBP11.36□□□□□ -0.59
TRIM9-204ENST00000555170 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
TRIM9-204ENST00000555170 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
TRIM9-204ENST00000555170 WDR90Q96KV7 1748 aa11.35□□□□□ -0.59
TRIM9-204ENST00000555170 CYP27B1O15528 508 aa11.35□□□□□ -0.59
TRIM9-204ENST00000555170 SCN11AQ9UI33 1791 aa11.34□□□□□ -0.59
TRIM9-204ENST00000555170 PLEKHG2Q9H7P9 1386 aa11.34□□□□□ -0.59
TRIM9-204ENST00000555170 DIAPH1O60610 1272 aaKnown RBP11.34□□□□□ -0.59
TRIM9-204ENST00000555170 SULT6B1Q6IMI4 303 aa11.34□□□□□ -0.59
TRIM9-204ENST00000555170 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
TRIM9-204ENST00000555170 HMOX1P09601 288 aa11.33□□□□□ -0.6
TRIM9-204ENST00000555170 ADAMTS7Q9UKP4 1686 aa11.33□□□□□ -0.6
TRIM9-204ENST00000555170 ZNF316A6NFI3 1004 aaPredicted RBP11.32□□□□□ -0.6
TRIM9-204ENST00000555170 SPG7Q9UQ90 795 aa11.32□□□□□ -0.6
TRIM9-204ENST00000555170 KDM6AO15550 1401 aaPredicted RBP11.32□□□□□ -0.6
TRIM9-204ENST00000555170 HSPA1AP0DMV8 641 aaKnown RBP11.31□□□□□ -0.6
TRIM9-204ENST00000555170 HSPA1BP0DMV9 641 aaKnown RBP11.31□□□□□ -0.6
TRIM9-204ENST00000555170 PHKG2P15735 406 aa11.31□□□□□ -0.6
TRIM9-204ENST00000555170 FSTL1Q12841 308 aa11.31□□□□□ -0.6
TRIM9-204ENST00000555170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRIM9-204ENST00000555170 TAF1LQ8IZX4 1826 aa11.3□□□□□ -0.6
TRIM9-204ENST00000555170 SMIM5Q71RC9 77 aa11.3□□□□□ -0.6
TRIM9-204ENST00000555170 C16orf71Q8IYS4 520 aaPredicted RBP11.3□□□□□ -0.6
TRIM9-204ENST00000555170 C5P01031 1676 aa11.3□□□□□ -0.6
TRIM9-204ENST00000555170 U2SURPO15042 1029 aaKnown RBP11.29□□□□□ -0.6
TRIM9-204ENST00000555170 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
TRIM9-204ENST00000555170 AMIGO3Q86WK7 504 aa11.29□□□□□ -0.6
TRIM9-204ENST00000555170 FLAD1Q8NFF5 587 aa11.29□□□□□ -0.6
TRIM9-204ENST00000555170 CFAP53Q96M91 514 aa11.29□□□□□ -0.6
TRIM9-204ENST00000555170 DLG5Q8TDM6 1919 aa11.29□□□□□ -0.6
TRIM9-204ENST00000555170 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
TRIM9-204ENST00000555170 MRC1P22897 1456 aa11.28□□□□□ -0.6
TRIM9-204ENST00000555170 RALBP1Q15311 655 aa11.28□□□□□ -0.6
TRIM9-204ENST00000555170 PLEKHO1Q53GL0 409 aaPredicted RBP11.28□□□□□ -0.6
TRIM9-204ENST00000555170 ZNF530Q6P9A1 599 aaPredicted RBP11.28□□□□□ -0.6
TRIM9-204ENST00000555170 ARHGAP27Q6ZUM4 889 aa11.28□□□□□ -0.6
TRIM9-204ENST00000555170 IFNL2Q8IZJ0 200 aa11.28□□□□□ -0.6
TRIM9-204ENST00000555170 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
TRIM9-204ENST00000555170 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
TRIM9-204ENST00000555170 AMOTQ4VCS5 1084 aa11.27□□□□□ -0.61
TRIM9-204ENST00000555170 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.61
TRIM9-204ENST00000555170 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
TRIM9-204ENST00000555170 MTHFSDQ2M296 383 aaKnown RBP11.26□□□□□ -0.61
TRIM9-204ENST00000555170 PRKRIP1Q9H875 184 aaPredicted RBP11.26□□□□□ -0.61
TRIM9-204ENST00000555170 RRAGCQ9HB90 399 aa11.26□□□□□ -0.61
TRIM9-204ENST00000555170 CICQ96RK0 1608 aaPredicted RBP11.25□□□□□ -0.61
TRIM9-204ENST00000555170 A0A0G2JLW4 131 aa11.25□□□□□ -0.61
TRIM9-204ENST00000555170 PRKAR2BP31323 418 aa11.25□□□□□ -0.61
TRIM9-204ENST00000555170 MPRIPQ6WCQ1 1025 aa11.25□□□□□ -0.61
TRIM9-204ENST00000555170 PIGBQ92521 554 aa11.25□□□□□ -0.61
TRIM9-204ENST00000555170 COL5A3P25940 1745 aaPredicted RBP11.25□□□□□ -0.61
TRIM9-204ENST00000555170 TJP1Q07157 1748 aa11.25□□□□□ -0.61
TRIM9-204ENST00000555170 PALLDQ8WX93 1383 aa11.25□□□□□ -0.61
TRIM9-204ENST00000555170 ZNF831Q5JPB2 1677 aa11.24□□□□□ -0.61
TRIM9-204ENST00000555170 UBR2Q8IWV8 1755 aa11.24□□□□□ -0.61
TRIM9-204ENST00000555170 PHF14O94880 888 aa11.24□□□□□ -0.61
TRIM9-204ENST00000555170 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
TRIM9-204ENST00000555170 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM9-204ENST00000555170 C1orf141Q5JVX7 400 aa11.24□□□□□ -0.61
TRIM9-204ENST00000555170 C9orf131Q5VYM1 1079 aa11.24□□□□□ -0.61
TRIM9-204ENST00000555170 DCAF5Q96JK2 942 aa11.24□□□□□ -0.61
TRIM9-204ENST00000555170 PHACTR3Q96KR7 559 aa11.24□□□□□ -0.61
TRIM9-204ENST00000555170 NUDCQ9Y266 331 aa11.24□□□□□ -0.61
TRIM9-204ENST00000555170 C4BP0C0L5 1744 aa11.23□□□□□ -0.61
TRIM9-204ENST00000555170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.23□□□□□ -0.61
TRIM9-204ENST00000555170 AKAP4Q5JQC9 854 aa11.23□□□□□ -0.61
TRIM9-204ENST00000555170 TMOD3Q9NYL9 352 aa11.23□□□□□ -0.61
TRIM9-204ENST00000555170 HSP90AB1P08238 724 aaKnown RBP11.22□□□□□ -0.61
TRIM9-204ENST00000555170 UBR3Q6ZT12 1888 aa11.22□□□□□ -0.61
TRIM9-204ENST00000555170 SMC1BQ8NDV3 1235 aa11.22□□□□□ -0.61
TRIM9-204ENST00000555170 AK7Q96M32 723 aa11.22□□□□□ -0.61
TRIM9-204ENST00000555170 LGR6Q9HBX8 967 aa11.22□□□□□ -0.61
TRIM9-204ENST00000555170 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
TRIM9-204ENST00000555170 PXDNLA1KZ92 1463 aa11.21□□□□□ -0.61
TRIM9-204ENST00000555170 KDM2BQ8NHM5 1336 aa11.21□□□□□ -0.61
TRIM9-204ENST00000555170 ERVV-2B6SEH9 535 aa11.21□□□□□ -0.61
TRIM9-204ENST00000555170 FCHSD2O94868 740 aa11.21□□□□□ -0.61
TRIM9-204ENST00000555170 TGFB2P61812 414 aa11.21□□□□□ -0.61
TRIM9-204ENST00000555170 ASAP1Q9ULH1 1129 aa11.21□□□□□ -0.61
TRIM9-204ENST00000555170 RNMTO43148 476 aaKnown RBP11.2□□□□□ -0.62
TRIM9-204ENST00000555170 MMP10P09238 476 aa11.2□□□□□ -0.62
TRIM9-204ENST00000555170 DPEP1P16444 411 aa11.2□□□□□ -0.62
TRIM9-204ENST00000555170 GAS2L2Q8NHY3 880 aa11.2□□□□□ -0.62
TRIM9-204ENST00000555170 PLEKHF1Q96S99 279 aa11.2□□□□□ -0.62
TRIM9-204ENST00000555170 ATG3Q9NT62 314 aa11.2□□□□□ -0.62
TRIM9-204ENST00000555170 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
TRIM9-204ENST00000555170 CABP4P57796 275 aa11.19□□□□□ -0.62
TRIM9-204ENST00000555170 FAM161AQ3B820 660 aa11.19□□□□□ -0.62
TRIM9-204ENST00000555170 CCDC184Q52MB2 194 aa11.19□□□□□ -0.62
TRIM9-204ENST00000555170 KDM3BQ7LBC6 1761 aa11.18□□□□□ -0.62
TRIM9-204ENST00000555170 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
TRIM9-204ENST00000555170 NFATC2IPQ8NCF5 419 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms