RNA–Protein interactions for RNA: ENST00000555110.1

PRKCH-212, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-212ENST00000555110 COL13A1Q5TAT6 717 aaPredicted RBP5.38□□□□□ -1.55
PRKCH-212ENST00000555110 TNS4Q8IZW8 715 aa5.38□□□□□ -1.55
PRKCH-212ENST00000555110 CCDC82Q8N4S0 544 aa5.38□□□□□ -1.55
PRKCH-212ENST00000555110 DDX54Q8TDD1 881 aaKnown RBP5.38□□□□□ -1.55
PRKCH-212ENST00000555110 IP6K1Q92551 441 aa5.38□□□□□ -1.55
PRKCH-212ENST00000555110 PUS7Q96PZ0 661 aaKnown RBP5.38□□□□□ -1.55
PRKCH-212ENST00000555110 CIZ1Q9ULV3 898 aaPredicted RBP5.38□□□□□ -1.55
PRKCH-212ENST00000555110 RTL1A6NKG5 1358 aa5.38□□□□□ -1.55
PRKCH-212ENST00000555110 FAM208AQ9UK61 1670 aaKnown RBP5.37□□□□□ -1.55
PRKCH-212ENST00000555110 SSFA2P28290 1259 aa5.37□□□□□ -1.55
PRKCH-212ENST00000555110 NME9Q86XW9 330 aa5.37□□□□□ -1.55
PRKCH-212ENST00000555110 ZCRB1Q8TBF4 217 aaKnown RBP5.37□□□□□ -1.55
PRKCH-212ENST00000555110 AK7Q96M32 723 aa5.37□□□□□ -1.55
PRKCH-212ENST00000555110 PALLDQ8WX93 1383 aa5.37□□□□□ -1.55
PRKCH-212ENST00000555110 MEGF6O75095 1541 aa5.37□□□□□ -1.55
PRKCH-212ENST00000555110 MON2Q7Z3U7 1717 aa5.37□□□□□ -1.55
PRKCH-212ENST00000555110 SLC34A2O95436 690 aa5.36□□□□□ -1.55
PRKCH-212ENST00000555110 HDGFL2Q7Z4V5 671 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-212ENST00000555110 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.36□□□□□ -1.55
PRKCH-212ENST00000555110 DHX37Q8IY37 1157 aaKnown RBP5.36□□□□□ -1.55
PRKCH-212ENST00000555110 C16orf71Q8IYS4 520 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-212ENST00000555110 SMARCC1Q92922 1105 aaPredicted RBP5.36□□□□□ -1.55
PRKCH-212ENST00000555110 PCDH11XQ9BZA7 1347 aa5.36□□□□□ -1.55
PRKCH-212ENST00000555110 PCDH11YQ9BZA8 1340 aa5.36□□□□□ -1.55
PRKCH-212ENST00000555110 PXDNLA1KZ92 1463 aa5.36□□□□□ -1.55
PRKCH-212ENST00000555110 CD163L1Q9NR16 1453 aa5.36□□□□□ -1.55
PRKCH-212ENST00000555110 DOT1LQ8TEK3 1739 aa5.36□□□□□ -1.55
PRKCH-212ENST00000555110 RGPD5Q99666 1765 aa5.36□□□□□ -1.55
PRKCH-212ENST00000555110 KAT6BQ8WYB5 2073 aa5.35□□□□□ -1.55
PRKCH-212ENST00000555110 WDR90Q96KV7 1748 aa5.35□□□□□ -1.55
PRKCH-212ENST00000555110 SMG6Q86US8 1419 aaKnown RBP5.35□□□□□ -1.55
PRKCH-212ENST00000555110 ROCK2O75116 1388 aaKnown RBP5.35□□□□□ -1.55
PRKCH-212ENST00000555110 ZC3H4Q9UPT8 1303 aaKnown RBP5.35□□□□□ -1.55
PRKCH-212ENST00000555110 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.35□□□□□ -1.55
PRKCH-212ENST00000555110 CAPN15O75808 1086 aa5.35□□□□□ -1.55
PRKCH-212ENST00000555110 TGFB2P61812 414 aa5.35□□□□□ -1.55
PRKCH-212ENST00000555110 AEBP1Q8IUX7 1158 aa5.35□□□□□ -1.55
PRKCH-212ENST00000555110 NMRK2Q9NPI5 230 aa5.35□□□□□ -1.55
PRKCH-212ENST00000555110 C4BP0C0L5 1744 aa5.34□□□□□ -1.55
PRKCH-212ENST00000555110 C5P01031 1676 aa5.34□□□□□ -1.55
PRKCH-212ENST00000555110 A0A1W2PP64 1363 aa5.34□□□□□ -1.55
PRKCH-212ENST00000555110 MAP3K19Q56UN5 1328 aa5.34□□□□□ -1.55
PRKCH-212ENST00000555110 KDM2BQ8NHM5 1336 aa5.34□□□□□ -1.55
PRKCH-212ENST00000555110 HOXC9P31274 260 aa5.34□□□□□ -1.55
PRKCH-212ENST00000555110 RAPGEF4Q8WZA2 1011 aa5.34□□□□□ -1.55
PRKCH-212ENST00000555110 TERF2IPQ9NYB0 399 aa5.34□□□□□ -1.55
PRKCH-212ENST00000555110 LTN1O94822 1766 aa5.34□□□□□ -1.56
PRKCH-212ENST00000555110 PHF14O94880 888 aa5.33□□□□□ -1.56
PRKCH-212ENST00000555110 MMP10P09238 476 aa5.33□□□□□ -1.56
PRKCH-212ENST00000555110 HMGB1P09429 215 aaKnown RBP5.33□□□□□ -1.56
PRKCH-212ENST00000555110 AMIGO3Q86WK7 504 aa5.33□□□□□ -1.56
PRKCH-212ENST00000555110 SMC1BQ8NDV3 1235 aa5.33□□□□□ -1.56
PRKCH-212ENST00000555110 LTV1Q96GA3 475 aaPredicted RBP5.33□□□□□ -1.56
PRKCH-212ENST00000555110 COG3Q96JB2 828 aa5.33□□□□□ -1.56
PRKCH-212ENST00000555110 TRAIPQ9BWF2 469 aa5.33□□□□□ -1.56
PRKCH-212ENST00000555110 WWC3Q9ULE0 1092 aa5.33□□□□□ -1.56
PRKCH-212ENST00000555110 BCS1LQ9Y276 419 aa5.33□□□□□ -1.56
PRKCH-212ENST00000555110 TOGARAM1Q9Y4F4 1720 aa5.33□□□□□ -1.56
PRKCH-212ENST00000555110 KIF24Q5T7B8 1368 aa5.32□□□□□ -1.56
PRKCH-212ENST00000555110 LOC102724428A0A0B4J2F2 783 aa5.32□□□□□ -1.56
PRKCH-212ENST00000555110 ZMYND10O75800 440 aa5.32□□□□□ -1.56
PRKCH-212ENST00000555110 HSPA1AP0DMV8 641 aaKnown RBP5.32□□□□□ -1.56
PRKCH-212ENST00000555110 HSPA1BP0DMV9 641 aaKnown RBP5.32□□□□□ -1.56
PRKCH-212ENST00000555110 TATP17735 454 aaPredicted RBP5.32□□□□□ -1.56
PRKCH-212ENST00000555110 AMPHP49418 695 aa5.32□□□□□ -1.56
PRKCH-212ENST00000555110 MFAP1P55081 439 aaKnown RBP5.32□□□□□ -1.56
PRKCH-212ENST00000555110 SIK1P57059 783 aa5.32□□□□□ -1.56
PRKCH-212ENST00000555110 C9orf131Q5VYM1 1079 aa5.32□□□□□ -1.56
PRKCH-212ENST00000555110 CCDC87Q9NVE4 849 aa5.32□□□□□ -1.56
PRKCH-212ENST00000555110 A0A0C4DFX4 3053 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 GNPATO15228 680 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 CYP27B1O15528 508 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 HTRA3P83110 453 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 POLA2Q14181 598 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 NBPF6Q5VWK0 638 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 MPRIPQ6WCQ1 1025 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 ARHGAP27Q6ZUM4 889 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 NLGN1Q8N2Q7 840 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 LINC00116Q8NCU8 138 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 TMC1Q8TDI8 760 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 DCAF5Q96JK2 942 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 NBPF4Q96M43 638 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 GZF1Q9H116 711 aaPredicted RBP5.31□□□□□ -1.56
PRKCH-212ENST00000555110 PCDH10Q9P2E7 1040 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 KIF13BQ9NQT8 1826 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 KCPQ6ZWJ8 1503 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 NCAPD2Q15021 1401 aa5.31□□□□□ -1.56
PRKCH-212ENST00000555110 INSRP06213 1382 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 FLT4P35916 1363 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 KDRP35968 1356 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 UBR3Q6ZT12 1888 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 TNRC18O15417 2968 aaPredicted RBP5.3□□□□□ -1.56
PRKCH-212ENST00000555110 FCHSD2O94868 740 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 DPEP1P16444 411 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 TMF1P82094 1093 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 DALRD3Q5D0E6 543 aaKnown RBP5.3□□□□□ -1.56
PRKCH-212ENST00000555110 TMCO4Q5TGY1 634 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 PIGBQ92521 554 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 L3MBTL2Q969R5 705 aa5.3□□□□□ -1.56
PRKCH-212ENST00000555110 CLUAP1Q96AJ1 413 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms