RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
CCDC85C-203ENST00000554996 SULT6B1Q6IMI4 303 aa13.95□□□□□ -0.18
CCDC85C-203ENST00000554996 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
CCDC85C-203ENST00000554996 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
CCDC85C-203ENST00000554996 SMIM5Q71RC9 77 aa13.94□□□□□ -0.18
CCDC85C-203ENST00000554996 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
CCDC85C-203ENST00000554996 MTFR1LQ9H019 292 aa13.94□□□□□ -0.18
CCDC85C-203ENST00000554996 ASAP1Q9ULH1 1129 aa13.94□□□□□ -0.18
CCDC85C-203ENST00000554996 MRC1P22897 1456 aa13.93□□□□□ -0.18
CCDC85C-203ENST00000554996 FCHSD2O94868 740 aa13.93□□□□□ -0.18
CCDC85C-203ENST00000554996 HMOX1P09601 288 aa13.93□□□□□ -0.18
CCDC85C-203ENST00000554996 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
CCDC85C-203ENST00000554996 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC85C-203ENST00000554996 UBR2Q8IWV8 1755 aa13.92□□□□□ -0.18
CCDC85C-203ENST00000554996 ITPK1Q13572 414 aa13.92□□□□□ -0.18
CCDC85C-203ENST00000554996 ZNF530Q6P9A1 599 aaPredicted RBP13.92□□□□□ -0.18
CCDC85C-203ENST00000554996 LINC00116Q8NCU8 138 aa13.92□□□□□ -0.18
CCDC85C-203ENST00000554996 SLC4A9Q96Q91 983 aa13.92□□□□□ -0.18
CCDC85C-203ENST00000554996 PLEKHF1Q96S99 279 aa13.92□□□□□ -0.18
CCDC85C-203ENST00000554996 COL23A1Q86Y22 540 aaPredicted RBP13.91□□□□□ -0.18
CCDC85C-203ENST00000554996 ATG3Q9NT62 314 aa13.91□□□□□ -0.18
CCDC85C-203ENST00000554996 TMOD3Q9NYL9 352 aa13.91□□□□□ -0.18
CCDC85C-203ENST00000554996 PPP1R1BQ9UD71 204 aaPredicted RBP13.91□□□□□ -0.18
CCDC85C-203ENST00000554996 ADAMTS8Q9UP79 889 aa13.91□□□□□ -0.18
CCDC85C-203ENST00000554996 PRKAR2BP31323 418 aa13.9□□□□□ -0.18
CCDC85C-203ENST00000554996 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCDC85C-203ENST00000554996 FHDC1Q9C0D6 1143 aaPredicted RBP13.9□□□□□ -0.18
CCDC85C-203ENST00000554996 TFCP2L1Q9NZI6 479 aa13.9□□□□□ -0.18
CCDC85C-203ENST00000554996 LOC102724428A0A0B4J2F2 783 aa13.89□□□□□ -0.19
CCDC85C-203ENST00000554996 SIK1P57059 783 aa13.89□□□□□ -0.19
CCDC85C-203ENST00000554996 PLEKHO1Q53GL0 409 aaPredicted RBP13.89□□□□□ -0.19
CCDC85C-203ENST00000554996 PHACTR3Q96KR7 559 aa13.89□□□□□ -0.19
CCDC85C-203ENST00000554996 KCPQ6ZWJ8 1503 aa13.89□□□□□ -0.19
CCDC85C-203ENST00000554996 KIAA1551Q9HCM1 1747 aa13.88□□□□□ -0.19
CCDC85C-203ENST00000554996 MSL1Q68DK7 614 aa13.88□□□□□ -0.19
CCDC85C-203ENST00000554996 AMOTQ4VCS5 1084 aa13.87□□□□□ -0.19
CCDC85C-203ENST00000554996 SMARCC1Q92922 1105 aaPredicted RBP13.87□□□□□ -0.19
CCDC85C-203ENST00000554996 DCAF5Q96JK2 942 aa13.87□□□□□ -0.19
CCDC85C-203ENST00000554996 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
CCDC85C-203ENST00000554996 MAP3K5Q99683 1374 aa13.86□□□□□ -0.19
CCDC85C-203ENST00000554996 ERVV-2B6SEH9 535 aa13.86□□□□□ -0.19
CCDC85C-203ENST00000554996 MTHFSDQ2M296 383 aaKnown RBP13.86□□□□□ -0.19
CCDC85C-203ENST00000554996 ARXQ96QS3 562 aa13.86□□□□□ -0.19
CCDC85C-203ENST00000554996 SYT17Q9BSW7 474 aa13.86□□□□□ -0.19
CCDC85C-203ENST00000554996 SLC16A10Q8TF71 515 aa13.85□□□□□ -0.19
CCDC85C-203ENST00000554996 RUNDC1Q96C34 613 aa13.85□□□□□ -0.19
CCDC85C-203ENST00000554996 PNNQ9H307 717 aaKnown RBP13.85□□□□□ -0.19
CCDC85C-203ENST00000554996 LGR6Q9HBX8 967 aa13.85□□□□□ -0.19
CCDC85C-203ENST00000554996 CHD4Q14839 1912 aa13.84□□□□□ -0.19
CCDC85C-203ENST00000554996 PHF14O94880 888 aa13.84□□□□□ -0.19
CCDC85C-203ENST00000554996 ATP6V1AP38606 617 aa13.84□□□□□ -0.19
CCDC85C-203ENST00000554996 C1orf141Q5JVX7 400 aa13.84□□□□□ -0.19
CCDC85C-203ENST00000554996 NLGN2Q8NFZ4 835 aa13.84□□□□□ -0.19
CCDC85C-203ENST00000554996 KIF13BQ9NQT8 1826 aa13.83□□□□□ -0.2
CCDC85C-203ENST00000554996 HSP90AB1P08238 724 aaKnown RBP13.83□□□□□ -0.2
CCDC85C-203ENST00000554996 CABP4P57796 275 aa13.83□□□□□ -0.2
CCDC85C-203ENST00000554996 CCDC146Q8IYE0 955 aa13.83□□□□□ -0.2
CCDC85C-203ENST00000554996 FAM9BQ8IZU0 186 aa13.83□□□□□ -0.2
CCDC85C-203ENST00000554996 GAS2L2Q8NHY3 880 aa13.83□□□□□ -0.2
CCDC85C-203ENST00000554996 AK7Q96M32 723 aa13.83□□□□□ -0.2
CCDC85C-203ENST00000554996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
CCDC85C-203ENST00000554996 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
CCDC85C-203ENST00000554996 MSH5O43196 834 aa13.82□□□□□ -0.2
CCDC85C-203ENST00000554996 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
CCDC85C-203ENST00000554996 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
CCDC85C-203ENST00000554996 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
CCDC85C-203ENST00000554996 GNPATO15228 680 aa13.81□□□□□ -0.2
CCDC85C-203ENST00000554996 RNMTO43148 476 aaKnown RBP13.81□□□□□ -0.2
CCDC85C-203ENST00000554996 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
CCDC85C-203ENST00000554996 MAPK8IP3Q9UPT6 1336 aa13.81□□□□□ -0.2
CCDC85C-203ENST00000554996 CEMIPQ8WUJ3 1361 aa13.81□□□□□ -0.2
CCDC85C-203ENST00000554996 N4BP2Q86UW6 1770 aaPredicted RBP13.81□□□□□ -0.2
CCDC85C-203ENST00000554996 PTCD1O75127 700 aaKnown RBP13.8□□□□□ -0.2
CCDC85C-203ENST00000554996 SSFA2P28290 1259 aa13.8□□□□□ -0.2
CCDC85C-203ENST00000554996 TMPOP42166 694 aaKnown RBP13.8□□□□□ -0.2
CCDC85C-203ENST00000554996 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
CCDC85C-203ENST00000554996 SLC52A2Q9HAB3 445 aa13.8□□□□□ -0.2
CCDC85C-203ENST00000554996 BRCA1P38398 1863 aaKnown RBP13.79□□□□□ -0.2
CCDC85C-203ENST00000554996 APAF1O14727 1248 aa13.79□□□□□ -0.2
CCDC85C-203ENST00000554996 YY1P25490 414 aa13.79□□□□□ -0.2
CCDC85C-203ENST00000554996 SLC39A6Q13433 755 aa13.79□□□□□ -0.2
CCDC85C-203ENST00000554996 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
CCDC85C-203ENST00000554996 CNTNAP4Q9C0A0 1308 aa13.79□□□□□ -0.2
CCDC85C-203ENST00000554996 GNAT3A8MTJ3 354 aa13.78□□□□□ -0.2
CCDC85C-203ENST00000554996 HTATSF1O43719 755 aaKnown RBP13.78□□□□□ -0.2
CCDC85C-203ENST00000554996 POLD1P28340 1107 aa13.78□□□□□ -0.2
CCDC85C-203ENST00000554996 NEFMP07197 916 aa13.77□□□□□ -0.21
CCDC85C-203ENST00000554996 AFDNP55196 1824 aaKnown RBP13.77□□□□□ -0.21
CCDC85C-203ENST00000554996 SCN7AQ01118 1682 aa13.77□□□□□ -0.21
CCDC85C-203ENST00000554996 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
CCDC85C-203ENST00000554996 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
CCDC85C-203ENST00000554996 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
CCDC85C-203ENST00000554996 CRKLP46109 303 aaKnown RBP13.76□□□□□ -0.21
CCDC85C-203ENST00000554996 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
CCDC85C-203ENST00000554996 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
CCDC85C-203ENST00000554996 RRP7AQ9Y3A4 280 aaKnown RBP13.76□□□□□ -0.21
CCDC85C-203ENST00000554996 RIPK4P57078 832 aa13.75□□□□□ -0.21
CCDC85C-203ENST00000554996 FLAD1Q8NFF5 587 aa13.75□□□□□ -0.21
CCDC85C-203ENST00000554996 BCORQ6W2J9 1755 aa13.75□□□□□ -0.21
CCDC85C-203ENST00000554996 LAMB4A4D0S4 1761 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms