RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 BTAF1O14981 1849 aa19.39■□□□□ 0.69
PSMA6-208ENST00000554843 ACSBG1Q96GR2 724 aa19.38■□□□□ 0.69
PSMA6-208ENST00000554843 IFT57Q9NWB7 429 aa19.38■□□□□ 0.69
PSMA6-208ENST00000554843 TNS1Q9HBL0 1735 aaKnown RBP19.37■□□□□ 0.69
PSMA6-208ENST00000554843 PRIM1P49642 420 aaKnown RBP19.37■□□□□ 0.69
PSMA6-208ENST00000554843 TAF7Q15545 349 aaPredicted RBP19.37■□□□□ 0.69
PSMA6-208ENST00000554843 UBR2Q8IWV8 1755 aa19.37■□□□□ 0.69
PSMA6-208ENST00000554843 ZNF853P0CG23 659 aa19.36■□□□□ 0.69
PSMA6-208ENST00000554843 GNAI1P63096 354 aa19.36■□□□□ 0.69
PSMA6-208ENST00000554843 GOLGA2Q08379 1002 aa19.36■□□□□ 0.69
PSMA6-208ENST00000554843 NFATC2IPQ8NCF5 419 aa19.36■□□□□ 0.69
PSMA6-208ENST00000554843 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
PSMA6-208ENST00000554843 CFAP44Q96MT7 982 aa19.36■□□□□ 0.69
PSMA6-208ENST00000554843 KCNQ2O43526 872 aa19.35■□□□□ 0.69
PSMA6-208ENST00000554843 PIGBQ92521 554 aa19.35■□□□□ 0.69
PSMA6-208ENST00000554843 YTHDC1Q96MU7 727 aaKnown RBP19.35■□□□□ 0.69
PSMA6-208ENST00000554843 BCL11BQ9C0K0 894 aaPredicted RBP19.35■□□□□ 0.69
PSMA6-208ENST00000554843 CHL1O00533 1208 aa19.34■□□□□ 0.69
PSMA6-208ENST00000554843 KCPQ6ZWJ8 1503 aa19.34■□□□□ 0.69
PSMA6-208ENST00000554843 BTBD11A6QL63 1104 aa19.33■□□□□ 0.68
PSMA6-208ENST00000554843 E9PSI1 815 aa19.33■□□□□ 0.68
PSMA6-208ENST00000554843 RGPD3A6NKT7 1758 aaPredicted RBP19.33■□□□□ 0.68
PSMA6-208ENST00000554843 RGPD4Q7Z3J3 1758 aa19.33■□□□□ 0.68
PSMA6-208ENST00000554843 CICQ96RK0 1608 aaPredicted RBP19.33■□□□□ 0.68
PSMA6-208ENST00000554843 TSPYL4Q9UJ04 414 aa19.32■□□□□ 0.68
PSMA6-208ENST00000554843 FANCIQ9NVI1 1328 aa19.31■□□□□ 0.68
PSMA6-208ENST00000554843 TRIM37O94972 964 aa19.31■□□□□ 0.68
PSMA6-208ENST00000554843 SLFN5Q08AF3 891 aa19.31■□□□□ 0.68
PSMA6-208ENST00000554843 ZNF790Q6PG37 636 aa19.31■□□□□ 0.68
PSMA6-208ENST00000554843 MYH16Q9H6N6 1097 aa19.31■□□□□ 0.68
PSMA6-208ENST00000554843 SPINK5Q9NQ38 1064 aaPredicted RBP19.31■□□□□ 0.68
PSMA6-208ENST00000554843 MBIPQ9NS73 344 aa19.31■□□□□ 0.68
PSMA6-208ENST00000554843 LY75O60449 1722 aa19.31■□□□□ 0.68
PSMA6-208ENST00000554843 PTF1AQ7RTS3 328 aa19.3■□□□□ 0.68
PSMA6-208ENST00000554843 TTC5Q8N0Z6 440 aa19.3■□□□□ 0.68
PSMA6-208ENST00000554843 SMARCC1Q92922 1105 aaPredicted RBP19.3■□□□□ 0.68
PSMA6-208ENST00000554843 ATG3Q9NT62 314 aa19.3■□□□□ 0.68
PSMA6-208ENST00000554843 PALLDQ8WX93 1383 aa19.3■□□□□ 0.68
PSMA6-208ENST00000554843 ZNF831Q5JPB2 1677 aa19.3■□□□□ 0.68
PSMA6-208ENST00000554843 LAS1LQ9Y4W2 734 aaKnown RBP19.29■□□□□ 0.68
PSMA6-208ENST00000554843 EP400Q96L91 3159 aa19.29■□□□□ 0.68
PSMA6-208ENST00000554843 SLC39A6Q13433 755 aa19.28■□□□□ 0.68
PSMA6-208ENST00000554843 TRMT2AQ8IZ69 625 aaKnown RBP19.28■□□□□ 0.68
PSMA6-208ENST00000554843 CDCA7LQ96GN5 454 aa19.28■□□□□ 0.68
PSMA6-208ENST00000554843 MIS18AQ9NYP9 233 aa19.28■□□□□ 0.68
PSMA6-208ENST00000554843 ASAP1Q9ULH1 1129 aa19.28■□□□□ 0.68
PSMA6-208ENST00000554843 HEG1Q9ULI3 1381 aa19.27■□□□□ 0.68
PSMA6-208ENST00000554843 LAMB4A4D0S4 1761 aa19.27■□□□□ 0.67
PSMA6-208ENST00000554843 KCNQ3O43525 872 aa19.26■□□□□ 0.67
PSMA6-208ENST00000554843 EIF4A1P60842 406 aaKnown RBP19.26■□□□□ 0.67
PSMA6-208ENST00000554843 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
PSMA6-208ENST00000554843 TSR2Q969E8 191 aaKnown RBP19.26■□□□□ 0.67
PSMA6-208ENST00000554843 ZNF496Q96IT1 587 aaPredicted RBP19.25■□□□□ 0.67
PSMA6-208ENST00000554843 FMNL2Q96PY5 1086 aa19.25■□□□□ 0.67
PSMA6-208ENST00000554843 TJP1Q07157 1748 aa19.25■□□□□ 0.67
PSMA6-208ENST00000554843 C5P01031 1676 aa19.24■□□□□ 0.67
PSMA6-208ENST00000554843 SOS1Q07889 1333 aaPredicted RBP19.24■□□□□ 0.67
PSMA6-208ENST00000554843 PLSCR1O15162 318 aa19.23■□□□□ 0.67
PSMA6-208ENST00000554843 ILDR2Q71H61 639 aa19.23■□□□□ 0.67
PSMA6-208ENST00000554843 CCDC125Q86Z20 511 aa19.23■□□□□ 0.67
PSMA6-208ENST00000554843 VSIG10Q8N0Z9 540 aa19.23■□□□□ 0.67
PSMA6-208ENST00000554843 LOC102724428A0A0B4J2F2 783 aa19.22■□□□□ 0.67
PSMA6-208ENST00000554843 APBA3O96018 575 aa19.22■□□□□ 0.67
PSMA6-208ENST00000554843 HOXB7P09629 217 aa19.22■□□□□ 0.67
PSMA6-208ENST00000554843 SIK1P57059 783 aa19.22■□□□□ 0.67
PSMA6-208ENST00000554843 COL5A3P25940 1745 aaPredicted RBP19.22■□□□□ 0.67
PSMA6-208ENST00000554843 PTCD1O75127 700 aaKnown RBP19.21■□□□□ 0.67
PSMA6-208ENST00000554843 SF3B2Q13435 895 aaKnown RBP19.21■□□□□ 0.67
PSMA6-208ENST00000554843 RREB1Q92766 1687 aa19.2■□□□□ 0.66
PSMA6-208ENST00000554843 GIGYF1O75420 1035 aaPredicted RBP19.2■□□□□ 0.66
PSMA6-208ENST00000554843 EXOSC9Q06265 439 aaKnown RBP19.2■□□□□ 0.66
PSMA6-208ENST00000554843 SLC4A9Q96Q91 983 aa19.2■□□□□ 0.66
PSMA6-208ENST00000554843 TAF1LQ8IZX4 1826 aa19.19■□□□□ 0.66
PSMA6-208ENST00000554843 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
PSMA6-208ENST00000554843 CT47B1P0C2W7 299 aaPredicted RBP19.19■□□□□ 0.66
PSMA6-208ENST00000554843 BAG6P46379 1132 aa19.19■□□□□ 0.66
PSMA6-208ENST00000554843 KRT24Q2M2I5 525 aa19.19■□□□□ 0.66
PSMA6-208ENST00000554843 SLC27A3Q5K4L6 730 aa19.19■□□□□ 0.66
PSMA6-208ENST00000554843 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
PSMA6-208ENST00000554843 C8orf58Q8NAV2 365 aa19.18■□□□□ 0.66
PSMA6-208ENST00000554843 CCNL1Q9UK58 526 aaPredicted RBP19.18■□□□□ 0.66
PSMA6-208ENST00000554843 TXNRD1Q16881 649 aa19.17■□□□□ 0.66
PSMA6-208ENST00000554843 TWISTNBQ3B726 338 aaPredicted RBP19.17■□□□□ 0.66
PSMA6-208ENST00000554843 UPF1Q92900 1129 aaKnown RBP eCLIP19.17■□□□□ 0.66
PSMA6-208ENST00000554843 TEX13AQ9BXU3 409 aaPredicted RBP19.17■□□□□ 0.66
PSMA6-208ENST00000554843 HMGB2P26583 209 aaKnown RBP19.16■□□□□ 0.66
PSMA6-208ENST00000554843 ATP6V1AP38606 617 aa19.16■□□□□ 0.66
PSMA6-208ENST00000554843 DNAJC10Q8IXB1 793 aa19.16■□□□□ 0.66
PSMA6-208ENST00000554843 TSPYL6Q8N831 410 aa19.16■□□□□ 0.66
PSMA6-208ENST00000554843 ITPK1Q13572 414 aa19.15■□□□□ 0.66
PSMA6-208ENST00000554843 ZNF428Q96B54 188 aa19.15■□□□□ 0.66
PSMA6-208ENST00000554843 CAMKK2Q96RR4 588 aa19.15■□□□□ 0.66
PSMA6-208ENST00000554843 CHMP4AQ9BY43 222 aa19.15■□□□□ 0.66
PSMA6-208ENST00000554843 C4BP0C0L5 1744 aa19.14■□□□□ 0.66
PSMA6-208ENST00000554843 NUP188Q5SRE5 1749 aa19.14■□□□□ 0.66
PSMA6-208ENST00000554843 PRAMEF22A3QJZ6 481 aa19.14■□□□□ 0.65
PSMA6-208ENST00000554843 ERBB4Q15303 1308 aa19.14■□□□□ 0.65
PSMA6-208ENST00000554843 VAMP4O75379 141 aa19.13■□□□□ 0.65
PSMA6-208ENST00000554843 HDGFL1Q5TGJ6 251 aa19.13■□□□□ 0.65
PSMA6-208ENST00000554843 PROM2Q8N271 834 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms