RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.46□□□□□ -1.06
MTHFD1-206ENST00000554353 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
MTHFD1-206ENST00000554353 WDR4P57081 412 aaKnown RBP8.45□□□□□ -1.06
MTHFD1-206ENST00000554353 FAM69CQ0P6D2 419 aa8.45□□□□□ -1.06
MTHFD1-206ENST00000554353 TOR4AQ9NXH8 423 aa8.45□□□□□ -1.06
MTHFD1-206ENST00000554353 ZIC2O95409 532 aaPredicted RBP8.44□□□□□ -1.06
MTHFD1-206ENST00000554353 SMPD1P17405 629 aa8.44□□□□□ -1.06
MTHFD1-206ENST00000554353 GDF10P55107 478 aa8.44□□□□□ -1.06
MTHFD1-206ENST00000554353 CBLBQ13191 982 aa8.44□□□□□ -1.06
MTHFD1-206ENST00000554353 ITPKCQ96DU7 683 aa8.44□□□□□ -1.06
MTHFD1-206ENST00000554353 WIZO95785 1651 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 SWI5Q1ZZU3 235 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 B4GALNT3Q6L9W6 998 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 TSEN2Q8NCE0 465 aaKnown RBP8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 CLP1Q92989 425 aaKnown RBP8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 ZFAND3Q9H8U3 227 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 RAB6BQ9NRW1 208 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 ZNF358Q9NW07 568 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 SLAIN2Q9P270 581 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 SERTAD1Q9UHV2 236 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 PDS5BQ9NTI5 1447 aa8.43□□□□□ -1.06
MTHFD1-206ENST00000554353 TMEM229AB2RXF0 380 aa8.42□□□□□ -1.06
MTHFD1-206ENST00000554353 PRMT3O60678 531 aa8.42□□□□□ -1.06
MTHFD1-206ENST00000554353 GNRH1P01148 92 aa8.42□□□□□ -1.06
MTHFD1-206ENST00000554353 SCNN1DP51172 638 aa8.42□□□□□ -1.06
MTHFD1-206ENST00000554353 PRIMPOLQ96LW4 560 aa8.42□□□□□ -1.06
MTHFD1-206ENST00000554353 ETNK1Q9HBU6 452 aa8.42□□□□□ -1.06
MTHFD1-206ENST00000554353 ARHGEF10LQ9HCE6 1279 aa8.42□□□□□ -1.06
MTHFD1-206ENST00000554353 TTBK1Q5TCY1 1321 aaPredicted RBP8.42□□□□□ -1.06
MTHFD1-206ENST00000554353 ADH1AP07327 375 aa8.41□□□□□ -1.06
MTHFD1-206ENST00000554353 ATP2B4P23634 1241 aa8.41□□□□□ -1.06
MTHFD1-206ENST00000554353 KCNA1Q09470 495 aa8.41□□□□□ -1.06
MTHFD1-206ENST00000554353 HPS1Q92902 700 aa8.41□□□□□ -1.06
MTHFD1-206ENST00000554353 AGBL1Q96MI9 1066 aa8.41□□□□□ -1.06
MTHFD1-206ENST00000554353 KLF16Q9BXK1 252 aaPredicted RBP8.41□□□□□ -1.06
MTHFD1-206ENST00000554353 STK17AQ9UEE5 414 aa8.41□□□□□ -1.06
MTHFD1-206ENST00000554353 CADPSQ9ULU8 1353 aa8.4□□□□□ -1.06
MTHFD1-206ENST00000554353 BACH1O14867 736 aa8.4□□□□□ -1.06
MTHFD1-206ENST00000554353 INHAP05111 366 aa8.4□□□□□ -1.06
MTHFD1-206ENST00000554353 TIMP2P16035 220 aa8.4□□□□□ -1.06
MTHFD1-206ENST00000554353 ESCO1Q5FWF5 840 aa8.4□□□□□ -1.06
MTHFD1-206ENST00000554353 PATL2C9JE40 543 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-206ENST00000554353 M0R2N6 131 aa8.39□□□□□ -1.07
MTHFD1-206ENST00000554353 SSFA2P28290 1259 aa8.39□□□□□ -1.07
MTHFD1-206ENST00000554353 RELBQ01201 579 aa8.39□□□□□ -1.07
MTHFD1-206ENST00000554353 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-206ENST00000554353 TNS4Q8IZW8 715 aa8.39□□□□□ -1.07
MTHFD1-206ENST00000554353 A0A1W2PRU2 124 aa8.38□□□□□ -1.07
MTHFD1-206ENST00000554353 FAM187AA6NFU0 413 aa8.38□□□□□ -1.07
MTHFD1-206ENST00000554353 PHLDB3Q6NSJ2 640 aa8.38□□□□□ -1.07
MTHFD1-206ENST00000554353 Q6ZVU0 165 aa8.38□□□□□ -1.07
MTHFD1-206ENST00000554353 GAS2L2Q8NHY3 880 aa8.38□□□□□ -1.07
MTHFD1-206ENST00000554353 ZNF395Q9H8N7 513 aaPredicted RBP8.38□□□□□ -1.07
MTHFD1-206ENST00000554353 MEN1O00255 615 aa8.37□□□□□ -1.07
MTHFD1-206ENST00000554353 WASLO00401 505 aaPredicted RBP8.37□□□□□ -1.07
MTHFD1-206ENST00000554353 IL2RAP01589 272 aa8.37□□□□□ -1.07
MTHFD1-206ENST00000554353 SCNN1AP37088 669 aa8.37□□□□□ -1.07
MTHFD1-206ENST00000554353 PTGIRP43119 386 aa8.37□□□□□ -1.07
MTHFD1-206ENST00000554353 KDF1Q8NAX2 398 aaPredicted RBP8.37□□□□□ -1.07
MTHFD1-206ENST00000554353 GZF1Q9H116 711 aaPredicted RBP8.37□□□□□ -1.07
MTHFD1-206ENST00000554353 IVNS1ABPQ9Y6Y0 642 aa8.37□□□□□ -1.07
MTHFD1-206ENST00000554353 CAPN5O15484 640 aaPredicted RBP8.36□□□□□ -1.07
MTHFD1-206ENST00000554353 DGAT1O75907 488 aa8.36□□□□□ -1.07
MTHFD1-206ENST00000554353 OCLNQ16625 522 aa8.36□□□□□ -1.07
MTHFD1-206ENST00000554353 CNKSR1Q969H4 720 aa8.36□□□□□ -1.07
MTHFD1-206ENST00000554353 XAGE2Q96GT9 111 aa8.36□□□□□ -1.07
MTHFD1-206ENST00000554353 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
MTHFD1-206ENST00000554353 SMTNP53814 917 aa8.35□□□□□ -1.07
MTHFD1-206ENST00000554353 TLR1Q15399 786 aa8.35□□□□□ -1.07
MTHFD1-206ENST00000554353 TBCELQ5QJ74 424 aa8.35□□□□□ -1.07
MTHFD1-206ENST00000554353 SCG3Q8WXD2 468 aaKnown RBP8.35□□□□□ -1.07
MTHFD1-206ENST00000554353 NLRP3Q96P20 1036 aa8.35□□□□□ -1.07
MTHFD1-206ENST00000554353 SLC4A9Q96Q91 983 aa8.35□□□□□ -1.07
MTHFD1-206ENST00000554353 ESYT1Q9BSJ8 1104 aa8.35□□□□□ -1.07
MTHFD1-206ENST00000554353 MRC2Q9UBG0 1479 aa8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 A6NJY4 79 aa8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 ARID4AP29374 1257 aaPredicted RBP8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 WEE1P30291 646 aa8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 CLN3Q13286 438 aa8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 MEIOBQ8N635 442 aa8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 CCER1Q8TC90 406 aaPredicted RBP8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 MKNK1Q9BUB5 465 aa8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.07
MTHFD1-206ENST00000554353 WDR62O43379 1518 aa8.34□□□□□ -1.08
MTHFD1-206ENST00000554353 EPHA4P54764 986 aa8.33□□□□□ -1.08
MTHFD1-206ENST00000554353 SLC9A9Q8IVB4 645 aa8.33□□□□□ -1.08
MTHFD1-206ENST00000554353 PURBQ96QR8 312 aaKnown RBP8.33□□□□□ -1.08
MTHFD1-206ENST00000554353 ATAD2Q6PL18 1390 aa8.33□□□□□ -1.08
MTHFD1-206ENST00000554353 POTECB2RU33 542 aa8.32□□□□□ -1.08
MTHFD1-206ENST00000554353 PPP1R12BO60237 982 aaPredicted RBP8.32□□□□□ -1.08
MTHFD1-206ENST00000554353 UPP2O95045 317 aa8.32□□□□□ -1.08
MTHFD1-206ENST00000554353 CENPCQ03188 943 aa8.32□□□□□ -1.08
MTHFD1-206ENST00000554353 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
MTHFD1-206ENST00000554353 SCHIP1Q9P0W5 487 aaPredicted RBP8.32□□□□□ -1.08
MTHFD1-206ENST00000554353 CEP164Q9UPV0 1460 aa8.32□□□□□ -1.08
MTHFD1-206ENST00000554353 RSF1Q96T23 1441 aaPredicted RBP8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 ST8SIA5O15466 376 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms