RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.52□□□□□ -0.88
ATXN3-226ENST00000554350 ARID5BQ14865 1188 aa9.52□□□□□ -0.89
ATXN3-226ENST00000554350 SRCAPQ6ZRS2 3230 aa9.52□□□□□ -0.89
ATXN3-226ENST00000554350 ITPKCQ96DU7 683 aa9.52□□□□□ -0.89
ATXN3-226ENST00000554350 CTDSPL2Q05D32 466 aa9.51□□□□□ -0.89
ATXN3-226ENST00000554350 HELBQ8NG08 1087 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-226ENST00000554350 PURBQ96QR8 312 aaKnown RBP9.51□□□□□ -0.89
ATXN3-226ENST00000554350 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
ATXN3-226ENST00000554350 GPBP1L1Q9HC44 474 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-226ENST00000554350 SYNMO15061 1565 aa9.5□□□□□ -0.89
ATXN3-226ENST00000554350 ZIC2O95409 532 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-226ENST00000554350 NR5A1Q13285 461 aa9.5□□□□□ -0.89
ATXN3-226ENST00000554350 AGERQ15109 404 aa9.5□□□□□ -0.89
ATXN3-226ENST00000554350 ZNF772Q68DY9 489 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-226ENST00000554350 PRXQ9BXM0 1461 aa9.49□□□□□ -0.89
ATXN3-226ENST00000554350 H3BM21 787 aa9.49□□□□□ -0.89
ATXN3-226ENST00000554350 RXRBP28702 533 aa9.49□□□□□ -0.89
ATXN3-226ENST00000554350 VEGFBP49765 207 aa9.49□□□□□ -0.89
ATXN3-226ENST00000554350 TRMT44Q8IYL2 757 aaKnown RBP9.49□□□□□ -0.89
ATXN3-226ENST00000554350 ARMC2Q8NEN0 867 aa9.49□□□□□ -0.89
ATXN3-226ENST00000554350 STRCP1A6NGW2 1772 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 KIDINS220Q9ULH0 1771 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 SOBPA7XYQ1 873 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-226ENST00000554350 NBPF14Q5TI25 921 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 NPAS3Q8IXF0 933 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 THEMISQ8N1K5 641 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-226ENST00000554350 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
ATXN3-226ENST00000554350 FAM117AQ9C073 453 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 KDM4CQ9H3R0 1056 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 CDK11AQ9UQ88 783 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-226ENST00000554350 MAP4K5Q9Y4K4 846 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 ITSN2Q9NZM3 1697 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 TNRQ92752 1358 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
ATXN3-226ENST00000554350 ABCC1P33527 1531 aa9.47□□□□□ -0.89
ATXN3-226ENST00000554350 KIF14Q15058 1648 aa9.47□□□□□ -0.89
ATXN3-226ENST00000554350 SKIV2LQ15477 1246 aaKnown RBP9.47□□□□□ -0.89
ATXN3-226ENST00000554350 SH3D19Q5HYK7 790 aa9.47□□□□□ -0.89
ATXN3-226ENST00000554350 PROCA1Q8NCQ7 364 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-226ENST00000554350 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
ATXN3-226ENST00000554350 IQGAP1P46940 1657 aa9.47□□□□□ -0.89
ATXN3-226ENST00000554350 GMPRP36959 345 aa9.46□□□□□ -0.9
ATXN3-226ENST00000554350 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-226ENST00000554350 STK17AQ9UEE5 414 aa9.46□□□□□ -0.9
ATXN3-226ENST00000554350 FSHRP23945 695 aa9.45□□□□□ -0.9
ATXN3-226ENST00000554350 SCARF1Q14162 830 aa9.45□□□□□ -0.9
ATXN3-226ENST00000554350 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
ATXN3-226ENST00000554350 PPP2R2DQ66LE6 453 aa9.45□□□□□ -0.9
ATXN3-226ENST00000554350 MEIOBQ8N635 442 aa9.45□□□□□ -0.9
ATXN3-226ENST00000554350 SLC16A10Q8TF71 515 aa9.45□□□□□ -0.9
ATXN3-226ENST00000554350 SPAG9O60271 1321 aaKnown RBP9.45□□□□□ -0.9
ATXN3-226ENST00000554350 JCADQ9P266 1359 aa9.45□□□□□ -0.9
ATXN3-226ENST00000554350 FAM135AQ9P2D6 1515 aa9.45□□□□□ -0.9
ATXN3-226ENST00000554350 MAGEB6P1A0A0J9YX57 407 aa9.44□□□□□ -0.9
ATXN3-226ENST00000554350 GPKOWQ92917 476 aaPredicted RBP eCLIP9.44□□□□□ -0.9
ATXN3-226ENST00000554350 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
ATXN3-226ENST00000554350 ZNF777Q9ULD5 760 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-226ENST00000554350 CLIP1P30622 1438 aa9.44□□□□□ -0.9
ATXN3-226ENST00000554350 MED14O60244 1454 aa9.44□□□□□ -0.9
ATXN3-226ENST00000554350 ROBO1Q9Y6N7 1651 aa9.44□□□□□ -0.9
ATXN3-226ENST00000554350 DEPDC5O75140 1603 aa9.43□□□□□ -0.9
ATXN3-226ENST00000554350 SETBP1Q9Y6X0 1596 aa9.43□□□□□ -0.9
ATXN3-226ENST00000554350 CARD14Q9BXL6 1004 aa9.43□□□□□ -0.9
ATXN3-226ENST00000554350 UGGT1Q9NYU2 1555 aa9.42□□□□□ -0.9
ATXN3-226ENST00000554350 C6orf118Q5T5N4 469 aa9.42□□□□□ -0.9
ATXN3-226ENST00000554350 VASH1Q7L8A9 365 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-226ENST00000554350 IRF7Q92985 503 aa9.42□□□□□ -0.9
ATXN3-226ENST00000554350 PHLPP1O60346 1717 aa9.42□□□□□ -0.9
ATXN3-226ENST00000554350 CDC42BPBQ9Y5S2 1711 aa9.42□□□□□ -0.9
ATXN3-226ENST00000554350 A2MP01023 1474 aa9.41□□□□□ -0.9
ATXN3-226ENST00000554350 NR6A1Q15406 480 aa9.41□□□□□ -0.9
ATXN3-226ENST00000554350 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
ATXN3-226ENST00000554350 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
ATXN3-226ENST00000554350 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
ATXN3-226ENST00000554350 SAMD9LQ8IVG5 1584 aa9.41□□□□□ -0.9
ATXN3-226ENST00000554350 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
ATXN3-226ENST00000554350 LRP6O75581 1613 aa9.4□□□□□ -0.9
ATXN3-226ENST00000554350 TROQ12816 1431 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-226ENST00000554350 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-226ENST00000554350 VSIG8P0DPA2 414 aa9.39□□□□□ -0.91
ATXN3-226ENST00000554350 CCDC116Q8IYX3 515 aa9.39□□□□□ -0.91
ATXN3-226ENST00000554350 EPS8L1Q8TE68 723 aa9.39□□□□□ -0.91
ATXN3-226ENST00000554350 XIRP1Q702N8 1843 aaKnown RBP9.39□□□□□ -0.91
ATXN3-226ENST00000554350 CDK12Q9NYV4 1490 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-226ENST00000554350 SPATA31A6Q5VVP1 1343 aa9.38□□□□□ -0.91
ATXN3-226ENST00000554350 ATP7AQ04656 1500 aa9.38□□□□□ -0.91
ATXN3-226ENST00000554350 HNRNPMP52272 730 aaKnown RBP eCLIP9.38□□□□□ -0.91
ATXN3-226ENST00000554350 DNMT3LQ9UJW3 386 aa9.38□□□□□ -0.91
ATXN3-226ENST00000554350 EMILIN1Q9Y6C2 1016 aa9.38□□□□□ -0.91
ATXN3-226ENST00000554350 NLRP1Q9C000 1473 aa9.38□□□□□ -0.91
ATXN3-226ENST00000554350 PREX2Q70Z35 1606 aa9.38□□□□□ -0.91
ATXN3-226ENST00000554350 TMEM94Q12767 1356 aa9.37□□□□□ -0.91
ATXN3-226ENST00000554350 LRRC9Q6ZRR7 1453 aa9.37□□□□□ -0.91
ATXN3-226ENST00000554350 BMP2P12643 396 aa9.37□□□□□ -0.91
ATXN3-226ENST00000554350 PPP1R26Q5T8A7 1209 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-226ENST00000554350 ARHGAP9Q9BRR9 750 aa9.37□□□□□ -0.91
ATXN3-226ENST00000554350 HMX1Q9NP08 348 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-226ENST00000554350 MIA2Q96PC5 1412 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms