RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 RUNDC1Q96C34 613 aa22.82■■□□□ 1.24
TUBB3-205ENST00000554336 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
TUBB3-205ENST00000554336 MAP3K5Q99683 1374 aa22.81■■□□□ 1.24
TUBB3-205ENST00000554336 NKX1-1Q15270 411 aaPredicted RBP22.81■■□□□ 1.24
TUBB3-205ENST00000554336 IFNL2Q8IZJ0 200 aa22.81■■□□□ 1.24
TUBB3-205ENST00000554336 FHDC1Q9C0D6 1143 aaPredicted RBP22.81■■□□□ 1.24
TUBB3-205ENST00000554336 SIPA1L3O60292 1781 aaPredicted RBP22.81■■□□□ 1.24
TUBB3-205ENST00000554336 MRC1P22897 1456 aa22.8■■□□□ 1.24
TUBB3-205ENST00000554336 DCAF8L1A6NGE4 600 aa22.8■■□□□ 1.24
TUBB3-205ENST00000554336 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
TUBB3-205ENST00000554336 NFE2L2Q16236 605 aa22.79■■□□□ 1.24
TUBB3-205ENST00000554336 AKAP4Q5JQC9 854 aa22.79■■□□□ 1.24
TUBB3-205ENST00000554336 AKT1S1Q96B36 256 aa22.79■■□□□ 1.24
TUBB3-205ENST00000554336 PNNQ9H307 717 aaKnown RBP22.79■■□□□ 1.24
TUBB3-205ENST00000554336 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
TUBB3-205ENST00000554336 C1orf141Q5JVX7 400 aa22.78■■□□□ 1.24
TUBB3-205ENST00000554336 SYT17Q9BSW7 474 aa22.78■■□□□ 1.24
TUBB3-205ENST00000554336 RRP7AQ9Y3A4 280 aaKnown RBP22.78■■□□□ 1.24
TUBB3-205ENST00000554336 APAF1O14727 1248 aa22.77■■□□□ 1.24
TUBB3-205ENST00000554336 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.24
TUBB3-205ENST00000554336 SLC27A3Q5K4L6 730 aa22.77■■□□□ 1.24
TUBB3-205ENST00000554336 MPRIPQ6WCQ1 1025 aa22.77■■□□□ 1.24
TUBB3-205ENST00000554336 UTRNP46939 3433 aa22.76■■□□□ 1.23
TUBB3-205ENST00000554336 COL24A1Q17RW2 1714 aa22.75■■□□□ 1.23
TUBB3-205ENST00000554336 LGR6Q9HBX8 967 aa22.75■■□□□ 1.23
TUBB3-205ENST00000554336 PNPLA7Q6ZV29 1317 aa22.75■■□□□ 1.23
TUBB3-205ENST00000554336 CEMIPQ8WUJ3 1361 aa22.75■■□□□ 1.23
TUBB3-205ENST00000554336 GNAT3A8MTJ3 354 aa22.74■■□□□ 1.23
TUBB3-205ENST00000554336 NEFMP07197 916 aa22.74■■□□□ 1.23
TUBB3-205ENST00000554336 IL17REQ8NFR9 667 aa22.74■■□□□ 1.23
TUBB3-205ENST00000554336 DCAF5Q96JK2 942 aa22.74■■□□□ 1.23
TUBB3-205ENST00000554336 ARXQ96QS3 562 aa22.74■■□□□ 1.23
TUBB3-205ENST00000554336 RNMTO43148 476 aaKnown RBP22.72■■□□□ 1.23
TUBB3-205ENST00000554336 DCTN1Q14203 1278 aa22.72■■□□□ 1.23
TUBB3-205ENST00000554336 HSP90AB1P08238 724 aaKnown RBP22.71■■□□□ 1.23
TUBB3-205ENST00000554336 RIPK4P57078 832 aa22.71■■□□□ 1.23
TUBB3-205ENST00000554336 NEUROD2Q15784 382 aa22.71■■□□□ 1.23
TUBB3-205ENST00000554336 MCM10Q7L590 875 aa22.71■■□□□ 1.23
TUBB3-205ENST00000554336 TRIM35Q9UPQ4 493 aa22.71■■□□□ 1.23
TUBB3-205ENST00000554336 THUMPD2Q9BTF0 503 aaKnown RBP22.7■■□□□ 1.22
TUBB3-205ENST00000554336 TFCP2L1Q9NZI6 479 aa22.7■■□□□ 1.22
TUBB3-205ENST00000554336 CCNL1Q9UK58 526 aaPredicted RBP22.7■■□□□ 1.22
TUBB3-205ENST00000554336 C5P01031 1676 aa22.7■■□□□ 1.22
TUBB3-205ENST00000554336 CHD4Q14839 1912 aa22.68■■□□□ 1.22
TUBB3-205ENST00000554336 TAF1LQ8IZX4 1826 aa22.68■■□□□ 1.22
TUBB3-205ENST00000554336 KDM3BQ7LBC6 1761 aa22.68■■□□□ 1.22
TUBB3-205ENST00000554336 HTATSF1O43719 755 aaKnown RBP22.67■■□□□ 1.22
TUBB3-205ENST00000554336 SLC16A10Q8TF71 515 aa22.67■■□□□ 1.22
TUBB3-205ENST00000554336 UBR2Q8IWV8 1755 aa22.67■■□□□ 1.22
TUBB3-205ENST00000554336 ERVV-2B6SEH9 535 aa22.66■■□□□ 1.22
TUBB3-205ENST00000554336 SLC52A2Q9HAB3 445 aa22.66■■□□□ 1.22
TUBB3-205ENST00000554336 KLHL34Q8N239 644 aa22.65■■□□□ 1.22
TUBB3-205ENST00000554336 PIGBQ92521 554 aa22.65■■□□□ 1.22
TUBB3-205ENST00000554336 RTF1Q92541 710 aaKnown RBP22.64■■□□□ 1.21
TUBB3-205ENST00000554336 NFATC2IPQ8NCF5 419 aa22.63■■□□□ 1.21
TUBB3-205ENST00000554336 TMOD3Q9NYL9 352 aa22.63■■□□□ 1.21
TUBB3-205ENST00000554336 POLD1P28340 1107 aa22.62■■□□□ 1.21
TUBB3-205ENST00000554336 CABP4P57796 275 aa22.62■■□□□ 1.21
TUBB3-205ENST00000554336 PALLDQ8WX93 1383 aa22.62■■□□□ 1.21
TUBB3-205ENST00000554336 KCPQ6ZWJ8 1503 aa22.62■■□□□ 1.21
TUBB3-205ENST00000554336 LMOD3Q0VAK6 560 aa22.61■■□□□ 1.21
TUBB3-205ENST00000554336 CCDC27Q2M243 656 aa22.61■■□□□ 1.21
TUBB3-205ENST00000554336 COL23A1Q86Y22 540 aaPredicted RBP22.61■■□□□ 1.21
TUBB3-205ENST00000554336 SALL2Q9Y467 1007 aaPredicted RBP22.61■■□□□ 1.21
TUBB3-205ENST00000554336 MSH5O43196 834 aa22.6■■□□□ 1.21
TUBB3-205ENST00000554336 NCBP3Q53F19 620 aaKnown RBP22.6■■□□□ 1.21
TUBB3-205ENST00000554336 WWC1Q8IX03 1113 aa22.6■■□□□ 1.21
TUBB3-205ENST00000554336 ZNF521Q96K83 1311 aa22.59■■□□□ 1.21
TUBB3-205ENST00000554336 TEFQ10587 303 aa22.59■■□□□ 1.21
TUBB3-205ENST00000554336 ZNF784Q8NCA9 323 aaPredicted RBP22.59■■□□□ 1.21
TUBB3-205ENST00000554336 ASAP1Q9ULH1 1129 aa22.59■■□□□ 1.21
TUBB3-205ENST00000554336 C4BP0C0L5 1744 aa22.59■■□□□ 1.21
TUBB3-205ENST00000554336 CICQ96RK0 1608 aaPredicted RBP22.58■■□□□ 1.21
TUBB3-205ENST00000554336 TJP1Q07157 1748 aa22.58■■□□□ 1.21
TUBB3-205ENST00000554336 NLGN2Q8NFZ4 835 aa22.58■■□□□ 1.21
TUBB3-205ENST00000554336 ATG3Q9NT62 314 aa22.58■■□□□ 1.21
TUBB3-205ENST00000554336 GOLGB1Q14789 3259 aaKnown RBP22.57■■□□□ 1.2
TUBB3-205ENST00000554336 SLC39A6Q13433 755 aa22.57■■□□□ 1.2
TUBB3-205ENST00000554336 MSL1Q68DK7 614 aa22.57■■□□□ 1.2
TUBB3-205ENST00000554336 ZNF831Q5JPB2 1677 aa22.56■■□□□ 1.2
TUBB3-205ENST00000554336 GPR162Q16538 588 aa22.56■■□□□ 1.2
TUBB3-205ENST00000554336 KCNQ3O43525 872 aa22.55■■□□□ 1.2
TUBB3-205ENST00000554336 MIS18AQ9NYP9 233 aa22.55■■□□□ 1.2
TUBB3-205ENST00000554336 UBR3Q6ZT12 1888 aa22.55■■□□□ 1.2
TUBB3-205ENST00000554336 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
TUBB3-205ENST00000554336 COL5A3P25940 1745 aaPredicted RBP22.54■■□□□ 1.2
TUBB3-205ENST00000554336 TAF7Q15545 349 aaPredicted RBP22.53■■□□□ 1.2
TUBB3-205ENST00000554336 AMIGO3Q86WK7 504 aa22.53■■□□□ 1.2
TUBB3-205ENST00000554336 NGEFQ8N5V2 710 aa22.53■■□□□ 1.2
TUBB3-205ENST00000554336 BTBD11A6QL63 1104 aa22.52■■□□□ 1.2
TUBB3-205ENST00000554336 ZNF853P0CG23 659 aa22.52■■□□□ 1.2
TUBB3-205ENST00000554336 HNRNPUQ00839 825 aaKnown RBP eCLIP22.52■■□□□ 1.2
TUBB3-205ENST00000554336 SMIM5Q71RC9 77 aa22.52■■□□□ 1.2
TUBB3-205ENST00000554336 SLC4A9Q96Q91 983 aa22.52■■□□□ 1.2
TUBB3-205ENST00000554336 SPINK5Q9NQ38 1064 aaPredicted RBP22.52■■□□□ 1.2
TUBB3-205ENST00000554336 ZNF790Q6PG37 636 aa22.51■■□□□ 1.19
TUBB3-205ENST00000554336 SMARCC1Q92922 1105 aaPredicted RBP22.51■■□□□ 1.19
TUBB3-205ENST00000554336 LAMB4A4D0S4 1761 aa22.49■■□□□ 1.19
TUBB3-205ENST00000554336 CHL1O00533 1208 aa22.49■■□□□ 1.19
TUBB3-205ENST00000554336 ZNF496Q96IT1 587 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms