RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 SLC10A4Q96EP9 437 aa10.05□□□□□ -0.8
KTN1-213ENST00000554306 EMILIN1Q9Y6C2 1016 aa10.05□□□□□ -0.8
KTN1-213ENST00000554306 AKNAQ7Z591 1439 aa10.05□□□□□ -0.8
KTN1-213ENST00000554306 PPRC1Q5VV67 1664 aaKnown RBP10.05□□□□□ -0.8
KTN1-213ENST00000554306 ZNF644Q9H582 1327 aaPredicted RBP10.05□□□□□ -0.8
KTN1-213ENST00000554306 ITGAEP38570 1179 aa10.04□□□□□ -0.8
KTN1-213ENST00000554306 CCDC116Q8IYX3 515 aa10.04□□□□□ -0.8
KTN1-213ENST00000554306 PURBQ96QR8 312 aaKnown RBP10.04□□□□□ -0.8
KTN1-213ENST00000554306 ZFAND3Q9H8U3 227 aa10.04□□□□□ -0.8
KTN1-213ENST00000554306 UPP2O95045 317 aa10.03□□□□□ -0.8
KTN1-213ENST00000554306 HNRNPMP52272 730 aaKnown RBP eCLIP10.03□□□□□ -0.8
KTN1-213ENST00000554306 KIAA1107Q9UPP5 1409 aa10.03□□□□□ -0.8
KTN1-213ENST00000554306 ADGRL1O94910 1474 aa10.03□□□□□ -0.8
KTN1-213ENST00000554306 ABCC1P33527 1531 aa10.02□□□□□ -0.8
KTN1-213ENST00000554306 ARHGEF5Q12774 1597 aa10.02□□□□□ -0.81
KTN1-213ENST00000554306 TSPY4P0CV99 314 aa10.02□□□□□ -0.81
KTN1-213ENST00000554306 TSPY10P0CW01 314 aa10.02□□□□□ -0.81
KTN1-213ENST00000554306 NPAS3Q8IXF0 933 aa10.02□□□□□ -0.81
KTN1-213ENST00000554306 EPS8L1Q8TE68 723 aa10.02□□□□□ -0.81
KTN1-213ENST00000554306 HMX1Q9NP08 348 aaPredicted RBP10.02□□□□□ -0.81
KTN1-213ENST00000554306 NXF1Q9UBU9 619 aaKnown RBP10.02□□□□□ -0.81
KTN1-213ENST00000554306 DNMT1P26358 1616 aaKnown RBP10.02□□□□□ -0.81
KTN1-213ENST00000554306 SYCP2Q9BX26 1530 aa10.02□□□□□ -0.81
KTN1-213ENST00000554306 SCAPERQ9BY12 1400 aa10.01□□□□□ -0.81
KTN1-213ENST00000554306 SLC16A10Q8TF71 515 aa10.01□□□□□ -0.81
KTN1-213ENST00000554306 CROCC2H7BZ55 1655 aa10.01□□□□□ -0.81
KTN1-213ENST00000554306 DHX9Q08211 1270 aaKnown RBP10□□□□□ -0.81
KTN1-213ENST00000554306 MEIOBQ8N635 442 aa10□□□□□ -0.81
KTN1-213ENST00000554306 KCTD15Q96SI1 283 aaPredicted RBP10□□□□□ -0.81
KTN1-213ENST00000554306 PCGF6Q9BYE7 350 aa10□□□□□ -0.81
KTN1-213ENST00000554306 PGPEP1Q9NXJ5 209 aa10□□□□□ -0.81
KTN1-213ENST00000554306 ADGBQ8N7X0 1667 aa9.99□□□□□ -0.81
KTN1-213ENST00000554306 DAPK1P53355 1430 aa9.99□□□□□ -0.81
KTN1-213ENST00000554306 DENND4BO75064 1496 aaPredicted RBP9.99□□□□□ -0.81
KTN1-213ENST00000554306 CCDC141Q6ZP82 1450 aa9.99□□□□□ -0.81
KTN1-213ENST00000554306 LINC00528Q8N1L1 170 aa9.99□□□□□ -0.81
KTN1-213ENST00000554306 ADAM32Q8TC27 787 aa9.99□□□□□ -0.81
KTN1-213ENST00000554306 OCSTAMPQ9BR26 566 aa9.99□□□□□ -0.81
KTN1-213ENST00000554306 ABCC5O15440 1437 aa9.99□□□□□ -0.81
KTN1-213ENST00000554306 MBD5Q9P267 1494 aa9.98□□□□□ -0.81
KTN1-213ENST00000554306 ARHGEF12Q9NZN5 1544 aa9.98□□□□□ -0.81
KTN1-213ENST00000554306 BMP2P12643 396 aa9.98□□□□□ -0.81
KTN1-213ENST00000554306 NBPF20Q3BBV1 942 aa9.98□□□□□ -0.81
KTN1-213ENST00000554306 PPP1R26Q5T8A7 1209 aaPredicted RBP9.98□□□□□ -0.81
KTN1-213ENST00000554306 RICTORQ6R327 1708 aa9.97□□□□□ -0.81
KTN1-213ENST00000554306 WIPF1O43516 503 aa9.97□□□□□ -0.81
KTN1-213ENST00000554306 C6orf118Q5T5N4 469 aa9.97□□□□□ -0.81
KTN1-213ENST00000554306 AFAP1Q8N556 730 aa9.97□□□□□ -0.81
KTN1-213ENST00000554306 TSEN34Q9BSV6 310 aaKnown RBP9.97□□□□□ -0.81
KTN1-213ENST00000554306 CHIC2Q9UKJ5 165 aa9.97□□□□□ -0.81
KTN1-213ENST00000554306 TRAPPC8Q9Y2L5 1435 aa9.97□□□□□ -0.81
KTN1-213ENST00000554306 ZNF518AQ6AHZ1 1483 aa9.97□□□□□ -0.81
KTN1-213ENST00000554306 SPAG9O60271 1321 aaKnown RBP9.96□□□□□ -0.82
KTN1-213ENST00000554306 POGZQ7Z3K3 1410 aa9.96□□□□□ -0.82
KTN1-213ENST00000554306 SHANK2Q9UPX8 1470 aa9.96□□□□□ -0.82
KTN1-213ENST00000554306 MAST1Q9Y2H9 1570 aa9.96□□□□□ -0.82
KTN1-213ENST00000554306 RAPGEF3O95398 923 aa9.95□□□□□ -0.82
KTN1-213ENST00000554306 DZIP3Q86Y13 1208 aaKnown RBP9.95□□□□□ -0.82
KTN1-213ENST00000554306 TRIM34Q9BYJ4 488 aa9.95□□□□□ -0.82
KTN1-213ENST00000554306 ANKRD30AQ9BXX3 1397 aa9.95□□□□□ -0.82
KTN1-213ENST00000554306 C9orf84Q5VXU9 1444 aa9.95□□□□□ -0.82
KTN1-213ENST00000554306 KDM6BO15054 1643 aa9.95□□□□□ -0.82
KTN1-213ENST00000554306 MAN1A2O60476 641 aa9.94□□□□□ -0.82
KTN1-213ENST00000554306 INSM1Q01101 510 aaPredicted RBP9.94□□□□□ -0.82
KTN1-213ENST00000554306 INTS6LQ5JSJ4 861 aaKnown RBP9.94□□□□□ -0.82
KTN1-213ENST00000554306 Q6ZVU0 165 aa9.94□□□□□ -0.82
KTN1-213ENST00000554306 IRF7Q92985 503 aa9.94□□□□□ -0.82
KTN1-213ENST00000554306 KDM5CP41229 1560 aa9.93□□□□□ -0.82
KTN1-213ENST00000554306 HECW2Q9P2P5 1572 aa9.93□□□□□ -0.82
KTN1-213ENST00000554306 RTEL1-TNFRSF6BF6WH68 1400 aa9.93□□□□□ -0.82
KTN1-213ENST00000554306 PTPRKQ15262 1439 aa9.93□□□□□ -0.82
KTN1-213ENST00000554306 ROCK1Q13464 1354 aa9.93□□□□□ -0.82
KTN1-213ENST00000554306 BANK1Q8NDB2 785 aa9.93□□□□□ -0.82
KTN1-213ENST00000554306 RRP7BPQ9NSQ0 103 aa9.93□□□□□ -0.82
KTN1-213ENST00000554306 INO80Q9ULG1 1556 aaPredicted RBP9.92□□□□□ -0.82
KTN1-213ENST00000554306 ATP7AQ04656 1500 aa9.92□□□□□ -0.82
KTN1-213ENST00000554306 H3BM21 787 aa9.92□□□□□ -0.82
KTN1-213ENST00000554306 SOCS7O14512 581 aa9.92□□□□□ -0.82
KTN1-213ENST00000554306 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
KTN1-213ENST00000554306 KIDINS220Q9ULH0 1771 aa9.92□□□□□ -0.82
KTN1-213ENST00000554306 GCC2Q8IWJ2 1684 aa9.92□□□□□ -0.82
KTN1-213ENST00000554306 PLXNC1O60486 1568 aa9.92□□□□□ -0.82
KTN1-213ENST00000554306 FRMPD1Q5SYB0 1578 aa9.92□□□□□ -0.82
KTN1-213ENST00000554306 ADGRL2O95490 1459 aa9.91□□□□□ -0.82
KTN1-213ENST00000554306 MLH3Q9UHC1 1453 aa9.91□□□□□ -0.82
KTN1-213ENST00000554306 SOS2Q07890 1332 aaPredicted RBP9.91□□□□□ -0.82
KTN1-213ENST00000554306 SOBPA7XYQ1 873 aa9.91□□□□□ -0.82
KTN1-213ENST00000554306 LCE2CQ5TA81 110 aa9.91□□□□□ -0.82
KTN1-213ENST00000554306 GJD4Q96KN9 370 aaPredicted RBP9.91□□□□□ -0.82
KTN1-213ENST00000554306 ZMYM4Q5VZL5 1548 aa9.91□□□□□ -0.82
KTN1-213ENST00000554306 ZFYVE16Q7Z3T8 1539 aa9.91□□□□□ -0.82
KTN1-213ENST00000554306 MAGI2Q86UL8 1455 aa9.91□□□□□ -0.82
KTN1-213ENST00000554306 NCOA1Q15788 1441 aa9.9□□□□□ -0.82
KTN1-213ENST00000554306 ZBBXA8MT70 800 aa9.9□□□□□ -0.82
KTN1-213ENST00000554306 COL17A1Q9UMD9 1497 aaPredicted RBP9.9□□□□□ -0.83
KTN1-213ENST00000554306 SETD5Q9C0A6 1442 aa9.9□□□□□ -0.83
KTN1-213ENST00000554306 KIF15Q9NS87 1388 aa9.89□□□□□ -0.83
KTN1-213ENST00000554306 DUOX2Q9NRD8 1548 aa9.89□□□□□ -0.83
KTN1-213ENST00000554306 APBB1O00213 710 aa9.89□□□□□ -0.83
KTN1-213ENST00000554306 VEGFBP49765 207 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms