RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-209	ENST00000553889	GNAI2	P04899	355 aa		11.47	□□□□□ -0.57
PRKCH-209	ENST00000553889	DDIT3	P35638	169 aa		11.47	□□□□□ -0.57
PRKCH-209	ENST00000553889	EIF4A1	P60842	406 aa	Known RBP	11.47	□□□□□ -0.57
PRKCH-209	ENST00000553889	ATP8B2	P98198	1209 aa		11.47	□□□□□ -0.57
PRKCH-209	ENST00000553889	TBC1D9	Q6ZT07	1266 aa		11.47	□□□□□ -0.57
PRKCH-209	ENST00000553889	G2E3	Q7L622	706 aa		11.47	□□□□□ -0.57
PRKCH-209	ENST00000553889	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.47	□□□□□ -0.57
PRKCH-209	ENST00000553889	SALL3	Q9BXA9	1300 aa		11.46	□□□□□ -0.57
PRKCH-209	ENST00000553889	EPB41L2	O43491	1005 aa	Known RBP	11.46	□□□□□ -0.57
PRKCH-209	ENST00000553889	MFAP1	P55081	439 aa	Known RBP	11.46	□□□□□ -0.57
PRKCH-209	ENST00000553889	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
PRKCH-209	ENST00000553889	MIS18A	Q9NYP9	233 aa		11.46	□□□□□ -0.57
PRKCH-209	ENST00000553889	AOX1	Q06278	1338 aa		11.45	□□□□□ -0.58
PRKCH-209	ENST00000553889	GSPT1	P15170	499 aa	Known RBP	11.45	□□□□□ -0.58
PRKCH-209	ENST00000553889	NUTM2G	Q5VZR2	741 aa		11.45	□□□□□ -0.58
PRKCH-209	ENST00000553889	KIF2C	Q99661	725 aa		11.45	□□□□□ -0.58
PRKCH-209	ENST00000553889	CHMP5	Q9NZZ3	219 aa		11.45	□□□□□ -0.58
PRKCH-209	ENST00000553889	STAP2	Q9UGK3	403 aa		11.45	□□□□□ -0.58
PRKCH-209	ENST00000553889	KRT28	Q7Z3Y7	464 aa		11.44	□□□□□ -0.58
PRKCH-209	ENST00000553889	PROSER2	Q86WR7	435 aa	Predicted RBP	11.44	□□□□□ -0.58
PRKCH-209	ENST00000553889	IL17RA	Q96F46	866 aa		11.44	□□□□□ -0.58
PRKCH-209	ENST00000553889	ORAI2	Q96SN7	254 aa		11.44	□□□□□ -0.58
PRKCH-209	ENST00000553889	SIPA1L3	O60292	1781 aa	Predicted RBP	11.44	□□□□□ -0.58
PRKCH-209	ENST00000553889	RNMT	O43148	476 aa	Known RBP	11.43	□□□□□ -0.58
PRKCH-209	ENST00000553889	POLA2	Q14181	598 aa		11.43	□□□□□ -0.58
PRKCH-209	ENST00000553889	GSE1	Q14687	1217 aa		11.43	□□□□□ -0.58
PRKCH-209	ENST00000553889	HDGFL1	Q5TGJ6	251 aa		11.43	□□□□□ -0.58
PRKCH-209	ENST00000553889	SSH3	Q8TE77	659 aa		11.43	□□□□□ -0.58
PRKCH-209	ENST00000553889	SRCIN1	Q9C0H9	1055 aa		11.43	□□□□□ -0.58
PRKCH-209	ENST00000553889	USP44	Q9H0E7	712 aa		11.43	□□□□□ -0.58
PRKCH-209	ENST00000553889	FRAT2	O75474	233 aa	Predicted RBP	11.42	□□□□□ -0.58
PRKCH-209	ENST00000553889	FKBP5	Q13451	457 aa	Predicted RBP	11.42	□□□□□ -0.58
PRKCH-209	ENST00000553889	MTX1	Q13505	466 aa		11.42	□□□□□ -0.58
PRKCH-209	ENST00000553889	HSCB	Q8IWL3	235 aa		11.42	□□□□□ -0.58
PRKCH-209	ENST00000553889	HDAC5	Q9UQL6	1122 aa		11.42	□□□□□ -0.58
PRKCH-209	ENST00000553889	CPD	O75976	1380 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	COL18A1	P39060	1754 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	ERBB3	P21860	1342 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889		F6X3S4	739 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	RAB11FIP3	O75154	756 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	ALDH1L1	O75891	902 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	PDE1A	P54750	535 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	TEF	Q10587	303 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	RABEP1	Q15276	862 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	CLEC17A	Q6ZS10	378 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	ANKRD24	Q8TF21	1146 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	USP26	Q9BXU7	913 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	RGPD2	P0DJD1	1756 aa		11.41	□□□□□ -0.58
PRKCH-209	ENST00000553889	TUBGCP6	Q96RT7	1819 aa		11.4	□□□□□ -0.58
PRKCH-209	ENST00000553889	SDS	P20132	328 aa		11.4	□□□□□ -0.58
PRKCH-209	ENST00000553889	BEND3	Q5T5X7	828 aa		11.4	□□□□□ -0.58
PRKCH-209	ENST00000553889	CASC1	Q6TDU7	716 aa		11.4	□□□□□ -0.58
PRKCH-209	ENST00000553889	C14orf37	Q86TY3	774 aa		11.4	□□□□□ -0.58
PRKCH-209	ENST00000553889	LTV1	Q96GA3	475 aa	Predicted RBP	11.4	□□□□□ -0.58
PRKCH-209	ENST00000553889	LRRCC1	Q9C099	1032 aa		11.4	□□□□□ -0.58
PRKCH-209	ENST00000553889	LGR6	Q9HBX8	967 aa		11.4	□□□□□ -0.58
PRKCH-209	ENST00000553889	DBF4	Q9UBU7	674 aa	Predicted RBP	11.4	□□□□□ -0.58
PRKCH-209	ENST00000553889	MRC1	P22897	1456 aa		11.39	□□□□□ -0.59
PRKCH-209	ENST00000553889	REC8	O95072	547 aa		11.39	□□□□□ -0.59
PRKCH-209	ENST00000553889	C1orf141	Q5JVX7	400 aa		11.39	□□□□□ -0.59
PRKCH-209	ENST00000553889	CADPS2	Q86UW7	1296 aa		11.39	□□□□□ -0.59
PRKCH-209	ENST00000553889	USHBP1	Q8N6Y0	703 aa		11.39	□□□□□ -0.59
PRKCH-209	ENST00000553889	CRYBG1	Q9Y4K1	1723 aa		11.39	□□□□□ -0.59
PRKCH-209	ENST00000553889	TMEM94	Q12767	1356 aa		11.39	□□□□□ -0.59
PRKCH-209	ENST00000553889	PXDN	Q92626	1479 aa		11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	UTY	O14607	1347 aa		11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	NPHP3	Q7Z494	1330 aa		11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	USP42	Q9H9J4	1324 aa	Known RBP	11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	BTBD11	A6QL63	1104 aa		11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	GIGYF1	O75420	1035 aa	Predicted RBP	11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	UBTFL1	P0CB47	393 aa	Predicted RBP	11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	HSP90AB4P	Q58FF6	505 aa		11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	SLC4A10	Q6U841	1118 aa		11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	DNAAF4	Q8WXU2	420 aa		11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	LRRC59	Q96AG4	307 aa	Known RBP	11.38	□□□□□ -0.59
PRKCH-209	ENST00000553889	TNS3	Q68CZ2	1445 aa		11.37	□□□□□ -0.59
PRKCH-209	ENST00000553889		K7ELQ4	463 aa	Predicted RBP	11.37	□□□□□ -0.59
PRKCH-209	ENST00000553889	ATF3	P18847	181 aa		11.37	□□□□□ -0.59
PRKCH-209	ENST00000553889	PTMS	P20962	102 aa		11.37	□□□□□ -0.59
PRKCH-209	ENST00000553889	MCM4	P33991	863 aa		11.37	□□□□□ -0.59
PRKCH-209	ENST00000553889	DNAJC5	Q9H3Z4	198 aa		11.37	□□□□□ -0.59
PRKCH-209	ENST00000553889	HYPK	Q9NX55	129 aa		11.37	□□□□□ -0.59
PRKCH-209	ENST00000553889	AXIN2	Q9Y2T1	843 aa		11.37	□□□□□ -0.59
PRKCH-209	ENST00000553889	STRCP1	A6NGW2	1772 aa		11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	SCN11A	Q9UI33	1791 aa		11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	PNMA6E	A0A0J9YXQ4	647 aa		11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	ERC2	O15083	957 aa		11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	ANAPC15	P60006	121 aa		11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	KSR2	Q6VAB6	950 aa		11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	SLK	Q9H2G2	1235 aa	Predicted RBP	11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	PHAX	Q9H814	394 aa	Known RBP	11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	LRRFIP2	Q9Y608	721 aa	Known RBP	11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	ADCY9	O60503	1353 aa		11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	COL15A1	P39059	1388 aa		11.36	□□□□□ -0.59
PRKCH-209	ENST00000553889	SPATA31A3	Q5VYP0	1347 aa		11.35	□□□□□ -0.59
PRKCH-209	ENST00000553889	PKD1L3	Q7Z443	1732 aa		11.35	□□□□□ -0.59
PRKCH-209	ENST00000553889	MX1	P20591	662 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms