RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 DDB1Q16531 1140 aa11.24□□□□□ -0.61
RDH11-205ENST00000553816 NBPF6Q5VWK0 638 aa11.24□□□□□ -0.61
RDH11-205ENST00000553816 USHBP1Q8N6Y0 703 aa11.24□□□□□ -0.61
RDH11-205ENST00000553816 NBPF4Q96M43 638 aa11.24□□□□□ -0.61
RDH11-205ENST00000553816 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
RDH11-205ENST00000553816 CC2D1BQ5T0F9 858 aaKnown RBP11.23□□□□□ -0.61
RDH11-205ENST00000553816 DEFB132Q7Z7B7 95 aa11.23□□□□□ -0.61
RDH11-205ENST00000553816 MORC1Q86VD1 984 aa11.23□□□□□ -0.61
RDH11-205ENST00000553816 MARCH10Q8NA82 808 aaPredicted RBP11.23□□□□□ -0.61
RDH11-205ENST00000553816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.61
RDH11-205ENST00000553816 MEGF6O75095 1541 aa11.23□□□□□ -0.61
RDH11-205ENST00000553816 IL2RBP14784 551 aa11.22□□□□□ -0.61
RDH11-205ENST00000553816 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
RDH11-205ENST00000553816 CNGB1Q14028 1251 aaPredicted RBP11.22□□□□□ -0.61
RDH11-205ENST00000553816 TNS2Q63HR2 1409 aa11.22□□□□□ -0.61
RDH11-205ENST00000553816 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
RDH11-205ENST00000553816 L3MBTL3Q96JM7 780 aaPredicted RBP11.22□□□□□ -0.61
RDH11-205ENST00000553816 TRIM37O94972 964 aa11.21□□□□□ -0.61
RDH11-205ENST00000553816 FAM196AQ6ZSG2 479 aa11.21□□□□□ -0.61
RDH11-205ENST00000553816 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
RDH11-205ENST00000553816 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
RDH11-205ENST00000553816 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
RDH11-205ENST00000553816 FBXO3Q9UK99 471 aa11.21□□□□□ -0.61
RDH11-205ENST00000553816 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.62
RDH11-205ENST00000553816 OVOS2A0A0G2JMS6 1433 aa11.2□□□□□ -0.62
RDH11-205ENST00000553816 NCAPD2Q15021 1401 aa11.2□□□□□ -0.62
RDH11-205ENST00000553816 EXOC5O00471 708 aa11.2□□□□□ -0.62
RDH11-205ENST00000553816 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
RDH11-205ENST00000553816 CCDC125Q86Z20 511 aa11.2□□□□□ -0.62
RDH11-205ENST00000553816 DOT1LQ8TEK3 1739 aa11.2□□□□□ -0.62
RDH11-205ENST00000553816 NHSQ6T4R5 1651 aa11.2□□□□□ -0.62
RDH11-205ENST00000553816 EIF4A2Q14240 407 aaKnown RBP11.19□□□□□ -0.62
RDH11-205ENST00000553816 EYA1Q99502 592 aa11.19□□□□□ -0.62
RDH11-205ENST00000553816 RREB1Q92766 1687 aa11.19□□□□□ -0.62
RDH11-205ENST00000553816 KAT6BQ8WYB5 2073 aa11.19□□□□□ -0.62
RDH11-205ENST00000553816 NPC1L1Q9UHC9 1359 aa11.18□□□□□ -0.62
RDH11-205ENST00000553816 PSEN1P49768 467 aa11.18□□□□□ -0.62
RDH11-205ENST00000553816 EN1Q05925 392 aaPredicted RBP11.18□□□□□ -0.62
RDH11-205ENST00000553816 BTAF1O14981 1849 aa11.18□□□□□ -0.62
RDH11-205ENST00000553816 NUP188Q5SRE5 1749 aa11.18□□□□□ -0.62
RDH11-205ENST00000553816 TOGARAM1Q9Y4F4 1720 aa11.18□□□□□ -0.62
RDH11-205ENST00000553816 BCL9O00512 1426 aa11.17□□□□□ -0.62
RDH11-205ENST00000553816 ITGB4P16144 1822 aa11.16□□□□□ -0.62
RDH11-205ENST00000553816 KCNQ2O43526 872 aa11.16□□□□□ -0.62
RDH11-205ENST00000553816 MTHFSP49914 203 aa11.16□□□□□ -0.62
RDH11-205ENST00000553816 SF3B2Q13435 895 aaKnown RBP11.16□□□□□ -0.62
RDH11-205ENST00000553816 EZH2Q15910 746 aaKnown RBP11.16□□□□□ -0.62
RDH11-205ENST00000553816 DDX54Q8TDD1 881 aaKnown RBP11.16□□□□□ -0.62
RDH11-205ENST00000553816 ACSBG1Q96GR2 724 aa11.16□□□□□ -0.62
RDH11-205ENST00000553816 RGPD3A6NKT7 1758 aaPredicted RBP11.16□□□□□ -0.62
RDH11-205ENST00000553816 RGPD4Q7Z3J3 1758 aa11.16□□□□□ -0.62
RDH11-205ENST00000553816 COL3A1P02461 1466 aaPredicted RBP11.15□□□□□ -0.62
RDH11-205ENST00000553816 VIRMAQ69YN4 1812 aaKnown RBP11.15□□□□□ -0.62
RDH11-205ENST00000553816 APBA3O96018 575 aa11.15□□□□□ -0.62
RDH11-205ENST00000553816 ZEB1P37275 1124 aaPredicted RBP11.15□□□□□ -0.62
RDH11-205ENST00000553816 BAG6P46379 1132 aa11.15□□□□□ -0.62
RDH11-205ENST00000553816 GSE1Q14687 1217 aa11.15□□□□□ -0.62
RDH11-205ENST00000553816 ZCRB1Q8TBF4 217 aaKnown RBP11.15□□□□□ -0.62
RDH11-205ENST00000553816 IGSF1Q8N6C5 1336 aa11.14□□□□□ -0.63
RDH11-205ENST00000553816 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
RDH11-205ENST00000553816 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
RDH11-205ENST00000553816 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
RDH11-205ENST00000553816 CAMKK2Q96RR4 588 aa11.14□□□□□ -0.63
RDH11-205ENST00000553816 HOXB3P14651 431 aaPredicted RBP11.13□□□□□ -0.63
RDH11-205ENST00000553816 IL13P35225 146 aa11.13□□□□□ -0.63
RDH11-205ENST00000553816 DDX10Q13206 875 aaKnown RBP11.13□□□□□ -0.63
RDH11-205ENST00000553816 AEBP1Q8IUX7 1158 aa11.13□□□□□ -0.63
RDH11-205ENST00000553816 BCL11BQ9C0K0 894 aaPredicted RBP11.13□□□□□ -0.63
RDH11-205ENST00000553816 CYP27B1O15528 508 aa11.12□□□□□ -0.63
RDH11-205ENST00000553816 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
RDH11-205ENST00000553816 LY75O60449 1722 aa11.12□□□□□ -0.63
RDH11-205ENST00000553816 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
RDH11-205ENST00000553816 KDRP35968 1356 aa11.1□□□□□ -0.63
RDH11-205ENST00000553816 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
RDH11-205ENST00000553816 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
RDH11-205ENST00000553816 PARD3Q8TEW0 1356 aa11.09□□□□□ -0.63
RDH11-205ENST00000553816 PLSCR1O15162 318 aa11.09□□□□□ -0.63
RDH11-205ENST00000553816 PRIM1P49642 420 aaKnown RBP11.09□□□□□ -0.63
RDH11-205ENST00000553816 VASPP50552 380 aaPredicted RBP11.09□□□□□ -0.63
RDH11-205ENST00000553816 SULT6B1Q6IMI4 303 aa11.09□□□□□ -0.63
RDH11-205ENST00000553816 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
RDH11-205ENST00000553816 DIAPH1O60610 1272 aaKnown RBP11.08□□□□□ -0.64
RDH11-205ENST00000553816 HMOX1P09601 288 aa11.08□□□□□ -0.64
RDH11-205ENST00000553816 PAPPAQ13219 1627 aa11.07□□□□□ -0.64
RDH11-205ENST00000553816 PSDA5PKW4 1024 aaPredicted RBP11.07□□□□□ -0.64
RDH11-205ENST00000553816 PHKG2P15735 406 aa11.07□□□□□ -0.64
RDH11-205ENST00000553816 SYTL4Q96C24 671 aaPredicted RBP11.07□□□□□ -0.64
RDH11-205ENST00000553816 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
RDH11-205ENST00000553816 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
RDH11-205ENST00000553816 TAF1LQ8IZX4 1826 aa11.07□□□□□ -0.64
RDH11-205ENST00000553816 TUBGCP6Q96RT7 1819 aa11.07□□□□□ -0.64
RDH11-205ENST00000553816 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
RDH11-205ENST00000553816 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
RDH11-205ENST00000553816 TXNRD1Q16881 649 aa11.06□□□□□ -0.64
RDH11-205ENST00000553816 U2SURPO15042 1029 aaKnown RBP11.05□□□□□ -0.64
RDH11-205ENST00000553816 KDM6AO15550 1401 aaPredicted RBP11.05□□□□□ -0.64
RDH11-205ENST00000553816 R3HDM1Q15032 1099 aaKnown RBP11.05□□□□□ -0.64
RDH11-205ENST00000553816 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
RDH11-205ENST00000553816 ANO8Q9HCE9 1232 aaPredicted RBP11.05□□□□□ -0.64
RDH11-205ENST00000553816 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms