RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 C4BP0C0L5 1744 aa27.27■■□□□ 1.96
XRCC3-205ENST00000553807 PNPLA7Q6ZV29 1317 aa27.27■■□□□ 1.96
XRCC3-205ENST00000553807 LGR6Q9HBX8 967 aa27.27■■□□□ 1.96
XRCC3-205ENST00000553807 MRC1P22897 1456 aa27.26■■□□□ 1.95
XRCC3-205ENST00000553807 MAP3K5Q99683 1374 aa27.26■■□□□ 1.95
XRCC3-205ENST00000553807 RNMTO43148 476 aaKnown RBP27.26■■□□□ 1.95
XRCC3-205ENST00000553807 PHACTR3Q96KR7 559 aa27.26■■□□□ 1.95
XRCC3-205ENST00000553807 ATF5Q9Y2D1 282 aaPredicted RBP27.26■■□□□ 1.95
XRCC3-205ENST00000553807 ADAMTS7Q9UKP4 1686 aa27.25■■□□□ 1.95
XRCC3-205ENST00000553807 RBM42Q9BTD8 480 aaKnown RBP27.25■■□□□ 1.95
XRCC3-205ENST00000553807 MYBBP1AQ9BQG0 1328 aaKnown RBP27.24■■□□□ 1.95
XRCC3-205ENST00000553807 ATP6V1AP38606 617 aa27.24■■□□□ 1.95
XRCC3-205ENST00000553807 SLC52A2Q9HAB3 445 aa27.24■■□□□ 1.95
XRCC3-205ENST00000553807 PPP1R1BQ9UD71 204 aaPredicted RBP27.24■■□□□ 1.95
XRCC3-205ENST00000553807 FCHSD2O94868 740 aa27.23■■□□□ 1.95
XRCC3-205ENST00000553807 HMGB2P26583 209 aaKnown RBP27.23■■□□□ 1.95
XRCC3-205ENST00000553807 ITPK1Q13572 414 aa27.23■■□□□ 1.95
XRCC3-205ENST00000553807 LINC00116Q8NCU8 138 aa27.23■■□□□ 1.95
XRCC3-205ENST00000553807 AK7Q96M32 723 aa27.23■■□□□ 1.95
XRCC3-205ENST00000553807 MTFR1LQ9H019 292 aa27.23■■□□□ 1.95
XRCC3-205ENST00000553807 GNAT3A8MTJ3 354 aa27.22■■□□□ 1.95
XRCC3-205ENST00000553807 MSH5O43196 834 aa27.21■■□□□ 1.95
XRCC3-205ENST00000553807 PTCD1O75127 700 aaKnown RBP27.2■■□□□ 1.94
XRCC3-205ENST00000553807 ZNF316A6NFI3 1004 aaPredicted RBP27.19■■□□□ 1.94
XRCC3-205ENST00000553807 SLC4A9Q96Q91 983 aa27.19■■□□□ 1.94
XRCC3-205ENST00000553807 ZNF831Q5JPB2 1677 aa27.18■■□□□ 1.94
XRCC3-205ENST00000553807 PTGER2P43116 358 aa27.17■■□□□ 1.94
XRCC3-205ENST00000553807 COL23A1Q86Y22 540 aaPredicted RBP27.17■■□□□ 1.94
XRCC3-205ENST00000553807 PHF14O94880 888 aa27.16■■□□□ 1.94
XRCC3-205ENST00000553807 PRKRIP1Q9H875 184 aaPredicted RBP27.16■■□□□ 1.94
XRCC3-205ENST00000553807 UBR3Q6ZT12 1888 aa27.16■■□□□ 1.94
XRCC3-205ENST00000553807 NEFMP07197 916 aa27.15■■□□□ 1.94
XRCC3-205ENST00000553807 TEFQ10587 303 aa27.15■■□□□ 1.94
XRCC3-205ENST00000553807 SLC39A6Q13433 755 aa27.15■■□□□ 1.94
XRCC3-205ENST00000553807 AMIGO3Q86WK7 504 aa27.15■■□□□ 1.94
XRCC3-205ENST00000553807 IL17REQ8NFR9 667 aa27.15■■□□□ 1.94
XRCC3-205ENST00000553807 SLC16A10Q8TF71 515 aa27.15■■□□□ 1.94
XRCC3-205ENST00000553807 COL5A3P25940 1745 aaPredicted RBP27.15■■□□□ 1.94
XRCC3-205ENST00000553807 GNPATO15228 680 aa27.14■■□□□ 1.94
XRCC3-205ENST00000553807 SMIM5Q71RC9 77 aa27.14■■□□□ 1.94
XRCC3-205ENST00000553807 TJP1Q07157 1748 aa27.13■■□□□ 1.93
XRCC3-205ENST00000553807 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.12■■□□□ 1.93
XRCC3-205ENST00000553807 FLAD1Q8NFF5 587 aa27.12■■□□□ 1.93
XRCC3-205ENST00000553807 KCPQ6ZWJ8 1503 aa27.11■■□□□ 1.93
XRCC3-205ENST00000553807 RTF1Q92541 710 aaKnown RBP27.11■■□□□ 1.93
XRCC3-205ENST00000553807 SGIP1Q9BQI5 828 aa27.11■■□□□ 1.93
XRCC3-205ENST00000553807 SIPA1L3O60292 1781 aaPredicted RBP27.11■■□□□ 1.93
XRCC3-205ENST00000553807 MAPK8IP3Q9UPT6 1336 aa27.11■■□□□ 1.93
XRCC3-205ENST00000553807 CEMIPQ8WUJ3 1361 aa27.1■■□□□ 1.93
XRCC3-205ENST00000553807 CICQ96RK0 1608 aaPredicted RBP27.1■■□□□ 1.93
XRCC3-205ENST00000553807 MSL1Q68DK7 614 aa27.1■■□□□ 1.93
XRCC3-205ENST00000553807 SSFA2P28290 1259 aa27.09■■□□□ 1.93
XRCC3-205ENST00000553807 MCM10Q7L590 875 aa27.09■■□□□ 1.93
XRCC3-205ENST00000553807 CNTNAP4Q9C0A0 1308 aa27.09■■□□□ 1.93
XRCC3-205ENST00000553807 UBR2Q8IWV8 1755 aa27.08■■□□□ 1.93
XRCC3-205ENST00000553807 POLD1P28340 1107 aa27.08■■□□□ 1.93
XRCC3-205ENST00000553807 TTC5Q8N0Z6 440 aa27.08■■□□□ 1.93
XRCC3-205ENST00000553807 PLEKHF1Q96S99 279 aa27.08■■□□□ 1.93
XRCC3-205ENST00000553807 PNNQ9H307 717 aaKnown RBP27.07■■□□□ 1.92
XRCC3-205ENST00000553807 COL24A1Q17RW2 1714 aa27.07■■□□□ 1.92
XRCC3-205ENST00000553807 DCTN1Q14203 1278 aa27.06■■□□□ 1.92
XRCC3-205ENST00000553807 DNAJC10Q8IXB1 793 aa27.06■■□□□ 1.92
XRCC3-205ENST00000553807 ARXQ96QS3 562 aa27.06■■□□□ 1.92
XRCC3-205ENST00000553807 WDR43Q15061 677 aaKnown RBP eCLIP27.05■■□□□ 1.92
XRCC3-205ENST00000553807 RTCBQ9Y3I0 505 aaKnown RBP27.05■■□□□ 1.92
XRCC3-205ENST00000553807 DLG5Q8TDM6 1919 aa27.04■■□□□ 1.92
XRCC3-205ENST00000553807 CRKLP46109 303 aaKnown RBP27.04■■□□□ 1.92
XRCC3-205ENST00000553807 NFE2L2Q16236 605 aa27.04■■□□□ 1.92
XRCC3-205ENST00000553807 RC3H1Q5TC82 1133 aaKnown RBP27.04■■□□□ 1.92
XRCC3-205ENST00000553807 MYH14Q7Z406 1995 aaKnown RBP27.03■■□□□ 1.92
XRCC3-205ENST00000553807 FHDC1Q9C0D6 1143 aaPredicted RBP27.03■■□□□ 1.92
XRCC3-205ENST00000553807 BTBD11A6QL63 1104 aa27.02■■□□□ 1.92
XRCC3-205ENST00000553807 HTATSF1O43719 755 aaKnown RBP27.02■■□□□ 1.92
XRCC3-205ENST00000553807 ZNF790Q6PG37 636 aa27.02■■□□□ 1.92
XRCC3-205ENST00000553807 KLHL34Q8N239 644 aa27.02■■□□□ 1.92
XRCC3-205ENST00000553807 RPS6KA4O75676 772 aa27■■□□□ 1.91
XRCC3-205ENST00000553807 TRAPPC3LQ5T215 181 aa27■■□□□ 1.91
XRCC3-205ENST00000553807 CCDC146Q8IYE0 955 aa27■■□□□ 1.91
XRCC3-205ENST00000553807 ZNF496Q96IT1 587 aaPredicted RBP27■■□□□ 1.91
XRCC3-205ENST00000553807 VSIG10Q8N0Z9 540 aa26.99■■□□□ 1.91
XRCC3-205ENST00000553807 KCNQ3O43525 872 aa26.98■■□□□ 1.91
XRCC3-205ENST00000553807 ADRA2BP18089 450 aa26.98■■□□□ 1.91
XRCC3-205ENST00000553807 CCDC87Q9NVE4 849 aa26.98■■□□□ 1.91
XRCC3-205ENST00000553807 C4AP0C0L4 1744 aa26.98■■□□□ 1.91
XRCC3-205ENST00000553807 HEG1Q9ULI3 1381 aa26.97■■□□□ 1.91
XRCC3-205ENST00000553807 CYP19A1P11511 503 aaPredicted RBP26.97■■□□□ 1.91
XRCC3-205ENST00000553807 INTS5Q6P9B9 1019 aaKnown RBP26.97■■□□□ 1.91
XRCC3-205ENST00000553807 FMNL2Q96PY5 1086 aa26.97■■□□□ 1.91
XRCC3-205ENST00000553807 ARHGEF1Q92888 912 aaKnown RBP26.96■■□□□ 1.91
XRCC3-205ENST00000553807 THUMPD2Q9BTF0 503 aaKnown RBP26.96■■□□□ 1.91
XRCC3-205ENST00000553807 RFC4P35249 363 aa26.95■■□□□ 1.9
XRCC3-205ENST00000553807 SYT17Q9BSW7 474 aa26.95■■□□□ 1.9
XRCC3-205ENST00000553807 ADAMTS8Q9UP79 889 aa26.95■■□□□ 1.9
XRCC3-205ENST00000553807 ANP32CO43423 234 aa26.93■■□□□ 1.9
XRCC3-205ENST00000553807 RIPK4P57078 832 aa26.93■■□□□ 1.9
XRCC3-205ENST00000553807 ZBTB1Q9Y2K1 713 aa26.93■■□□□ 1.9
XRCC3-205ENST00000553807 RRP7AQ9Y3A4 280 aaKnown RBP26.93■■□□□ 1.9
XRCC3-205ENST00000553807 STARD3NLO95772 234 aa26.92■■□□□ 1.9
XRCC3-205ENST00000553807 TAF7Q15545 349 aaPredicted RBP26.92■■□□□ 1.9
XRCC3-205ENST00000553807 RUNDC1Q96C34 613 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms