RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 CCNL1Q9UK58 526 aaPredicted RBP18.83■□□□□ 0.6
SV2B-204ENST00000553727 TMPOP42166 694 aaKnown RBP18.82■□□□□ 0.6
SV2B-204ENST00000553727 SLC27A3Q5K4L6 730 aa18.82■□□□□ 0.6
SV2B-204ENST00000553727 NBPF14Q5TI25 921 aa18.82■□□□□ 0.6
SV2B-204ENST00000553727 FAM9BQ8IZU0 186 aa18.82■□□□□ 0.6
SV2B-204ENST00000553727 LRRC4BQ9NT99 713 aa18.82■□□□□ 0.6
SV2B-204ENST00000553727 ITGB4P16144 1822 aa18.81■□□□□ 0.6
SV2B-204ENST00000553727 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
SV2B-204ENST00000553727 SLC39A6Q13433 755 aa18.8■□□□□ 0.6
SV2B-204ENST00000553727 LOC102724428A0A0B4J2F2 783 aa18.79■□□□□ 0.6
SV2B-204ENST00000553727 APAF1O14727 1248 aa18.79■□□□□ 0.6
SV2B-204ENST00000553727 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
SV2B-204ENST00000553727 SIK1P57059 783 aa18.79■□□□□ 0.6
SV2B-204ENST00000553727 CEMIPQ8WUJ3 1361 aa18.79■□□□□ 0.6
SV2B-204ENST00000553727 SCN11AQ9UI33 1791 aa18.78■□□□□ 0.6
SV2B-204ENST00000553727 MIER1Q8N108 512 aa18.78■□□□□ 0.6
SV2B-204ENST00000553727 THUMPD2Q9BTF0 503 aaKnown RBP18.78■□□□□ 0.6
SV2B-204ENST00000553727 SENP3-EIF4A1A0A087X0R7 540 aa18.77■□□□□ 0.6
SV2B-204ENST00000553727 PSDA5PKW4 1024 aaPredicted RBP18.77■□□□□ 0.6
SV2B-204ENST00000553727 BTBD11A6QL63 1104 aa18.77■□□□□ 0.6
SV2B-204ENST00000553727 ATP6V1AP38606 617 aa18.77■□□□□ 0.6
SV2B-204ENST00000553727 LMOD3Q0VAK6 560 aa18.77■□□□□ 0.6
SV2B-204ENST00000553727 R3HDM1Q15032 1099 aaKnown RBP18.77■□□□□ 0.6
SV2B-204ENST00000553727 STK32BQ9NY57 414 aa18.77■□□□□ 0.6
SV2B-204ENST00000553727 RGPD3A6NKT7 1758 aaPredicted RBP18.77■□□□□ 0.6
SV2B-204ENST00000553727 RGPD4Q7Z3J3 1758 aa18.77■□□□□ 0.6
SV2B-204ENST00000553727 CCER2I3L3R5 266 aa18.76■□□□□ 0.59
SV2B-204ENST00000553727 TTC5Q8N0Z6 440 aa18.76■□□□□ 0.59
SV2B-204ENST00000553727 ANO8Q9HCE9 1232 aaPredicted RBP18.76■□□□□ 0.59
SV2B-204ENST00000553727 MRC1P22897 1456 aa18.76■□□□□ 0.59
SV2B-204ENST00000553727 RREB1Q92766 1687 aa18.76■□□□□ 0.59
SV2B-204ENST00000553727 ADAMTS7Q9UKP4 1686 aa18.76■□□□□ 0.59
SV2B-204ENST00000553727 TAF7Q15545 349 aaPredicted RBP18.75■□□□□ 0.59
SV2B-204ENST00000553727 NUP188Q5SRE5 1749 aa18.74■□□□□ 0.59
SV2B-204ENST00000553727 ITPK1Q13572 414 aa18.73■□□□□ 0.59
SV2B-204ENST00000553727 SLC15A2Q16348 729 aa18.73■□□□□ 0.59
SV2B-204ENST00000553727 ZNF790Q6PG37 636 aa18.73■□□□□ 0.59
SV2B-204ENST00000553727 SLC4A9Q96Q91 983 aa18.73■□□□□ 0.59
SV2B-204ENST00000553727 MIS18AQ9NYP9 233 aa18.73■□□□□ 0.59
SV2B-204ENST00000553727 TRIM35Q9UPQ4 493 aa18.73■□□□□ 0.59
SV2B-204ENST00000553727 LY75O60449 1722 aa18.72■□□□□ 0.59
SV2B-204ENST00000553727 KCNQ3O43525 872 aa18.72■□□□□ 0.59
SV2B-204ENST00000553727 HMGB2P26583 209 aaKnown RBP18.72■□□□□ 0.59
SV2B-204ENST00000553727 ZNF827Q17R98 1081 aa18.72■□□□□ 0.59
SV2B-204ENST00000553727 LINC00116Q8NCU8 138 aa18.71■□□□□ 0.59
SV2B-204ENST00000553727 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
SV2B-204ENST00000553727 AKT1S1Q96B36 256 aa18.7■□□□□ 0.58
SV2B-204ENST00000553727 ZNF496Q96IT1 587 aaPredicted RBP18.7■□□□□ 0.58
SV2B-204ENST00000553727 SALL2Q9Y467 1007 aaPredicted RBP18.7■□□□□ 0.58
SV2B-204ENST00000553727 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
SV2B-204ENST00000553727 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
SV2B-204ENST00000553727 VIRMAQ69YN4 1812 aaKnown RBP18.7■□□□□ 0.58
SV2B-204ENST00000553727 AK7Q96M32 723 aa18.69■□□□□ 0.58
SV2B-204ENST00000553727 FMNL2Q96PY5 1086 aa18.69■□□□□ 0.58
SV2B-204ENST00000553727 DNAJC10Q8IXB1 793 aa18.68■□□□□ 0.58
SV2B-204ENST00000553727 TSPYL4Q9UJ04 414 aa18.67■□□□□ 0.58
SV2B-204ENST00000553727 VSIG10Q8N0Z9 540 aa18.66■□□□□ 0.58
SV2B-204ENST00000553727 KCPQ6ZWJ8 1503 aa18.65■□□□□ 0.58
SV2B-204ENST00000553727 PAPPAQ13219 1627 aa18.65■□□□□ 0.58
SV2B-204ENST00000553727 GNPATO15228 680 aa18.65■□□□□ 0.58
SV2B-204ENST00000553727 MSH5O43196 834 aa18.65■□□□□ 0.58
SV2B-204ENST00000553727 PDGFDQ9GZP0 370 aaPredicted RBP18.65■□□□□ 0.58
SV2B-204ENST00000553727 HEG1Q9ULI3 1381 aa18.65■□□□□ 0.58
SV2B-204ENST00000553727 SIPA1L3O60292 1781 aaPredicted RBP18.65■□□□□ 0.58
SV2B-204ENST00000553727 PHF14O94880 888 aa18.64■□□□□ 0.57
SV2B-204ENST00000553727 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.57
SV2B-204ENST00000553727 SMIM5Q71RC9 77 aa18.64■□□□□ 0.57
SV2B-204ENST00000553727 C5P01031 1676 aa18.63■□□□□ 0.57
SV2B-204ENST00000553727 STARD3NLO95772 234 aa18.63■□□□□ 0.57
SV2B-204ENST00000553727 CYP19A1P11511 503 aaPredicted RBP18.63■□□□□ 0.57
SV2B-204ENST00000553727 CRKLP46109 303 aaKnown RBP18.63■□□□□ 0.57
SV2B-204ENST00000553727 RC3H1Q5TC82 1133 aaKnown RBP18.63■□□□□ 0.57
SV2B-204ENST00000553727 WWC1Q8IX03 1113 aa18.63■□□□□ 0.57
SV2B-204ENST00000553727 TEX13AQ9BXU3 409 aaPredicted RBP18.63■□□□□ 0.57
SV2B-204ENST00000553727 SNRPA1P09661 255 aaKnown RBP18.62■□□□□ 0.57
SV2B-204ENST00000553727 EIF4A1P60842 406 aaKnown RBP18.62■□□□□ 0.57
SV2B-204ENST00000553727 CCDC27Q2M243 656 aa18.62■□□□□ 0.57
SV2B-204ENST00000553727 BABAM1Q9NWV8 329 aa18.62■□□□□ 0.57
SV2B-204ENST00000553727 RTCBQ9Y3I0 505 aaKnown RBP18.62■□□□□ 0.57
SV2B-204ENST00000553727 PNPLA7Q6ZV29 1317 aa18.62■□□□□ 0.57
SV2B-204ENST00000553727 C4BP0C0L5 1744 aa18.61■□□□□ 0.57
SV2B-204ENST00000553727 CNTNAP4Q9C0A0 1308 aa18.61■□□□□ 0.57
SV2B-204ENST00000553727 PRAMEF22A3QJZ6 481 aa18.61■□□□□ 0.57
SV2B-204ENST00000553727 CHL1O00533 1208 aa18.61■□□□□ 0.57
SV2B-204ENST00000553727 AMIGO3Q86WK7 504 aa18.61■□□□□ 0.57
SV2B-204ENST00000553727 COL23A1Q86Y22 540 aaPredicted RBP18.61■□□□□ 0.57
SV2B-204ENST00000553727 CFAP44Q96MT7 982 aa18.61■□□□□ 0.57
SV2B-204ENST00000553727 CCDC87Q9NVE4 849 aa18.61■□□□□ 0.57
SV2B-204ENST00000553727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.6■□□□□ 0.57
SV2B-204ENST00000553727 RPS6KA4O75676 772 aa18.6■□□□□ 0.57
SV2B-204ENST00000553727 ZBTB7AO95365 584 aa18.6■□□□□ 0.57
SV2B-204ENST00000553727 INTS5Q6P9B9 1019 aaKnown RBP18.6■□□□□ 0.57
SV2B-204ENST00000553727 FLAD1Q8NFF5 587 aa18.6■□□□□ 0.57
SV2B-204ENST00000553727 USP16Q9Y5T5 823 aa18.6■□□□□ 0.57
SV2B-204ENST00000553727 TAF1LQ8IZX4 1826 aa18.59■□□□□ 0.57
SV2B-204ENST00000553727 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
SV2B-204ENST00000553727 GNAI1P63096 354 aa18.59■□□□□ 0.57
SV2B-204ENST00000553727 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
SV2B-204ENST00000553727 IFT57Q9NWB7 429 aa18.59■□□□□ 0.57
SV2B-204ENST00000553727 ZNF831Q5JPB2 1677 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms