RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 TTC22Q5TAA0 569 aa13.35□□□□□ -0.27
TTC8-208ENST00000553718 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
TTC8-208ENST00000553718 KRT28Q7Z3Y7 464 aa13.35□□□□□ -0.27
TTC8-208ENST00000553718 ANTXR1Q9H6X2 564 aa13.35□□□□□ -0.27
TTC8-208ENST00000553718 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
TTC8-208ENST00000553718 LMO7Q8WWI1 1683 aa13.34□□□□□ -0.27
TTC8-208ENST00000553718 TRPM3Q9HCF6 1732 aaPredicted RBP13.34□□□□□ -0.27
TTC8-208ENST00000553718 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
TTC8-208ENST00000553718 MEIS3Q99687 375 aa13.34□□□□□ -0.27
TTC8-208ENST00000553718 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
TTC8-208ENST00000553718 N4BP2Q86UW6 1770 aaPredicted RBP13.34□□□□□ -0.27
TTC8-208ENST00000553718 EPB41L2O43491 1005 aaKnown RBP13.33□□□□□ -0.28
TTC8-208ENST00000553718 CASC1Q6TDU7 716 aa13.33□□□□□ -0.28
TTC8-208ENST00000553718 G2E3Q7L622 706 aa13.33□□□□□ -0.28
TTC8-208ENST00000553718 ORAI2Q96SN7 254 aa13.33□□□□□ -0.28
TTC8-208ENST00000553718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.33□□□□□ -0.28
TTC8-208ENST00000553718 FAM208AQ9UK61 1670 aaKnown RBP13.32□□□□□ -0.28
TTC8-208ENST00000553718 HSPA2P54652 639 aa13.32□□□□□ -0.28
TTC8-208ENST00000553718 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
TTC8-208ENST00000553718 HSCBQ8IWL3 235 aa13.32□□□□□ -0.28
TTC8-208ENST00000553718 LTV1Q96GA3 475 aaPredicted RBP13.32□□□□□ -0.28
TTC8-208ENST00000553718 CHMP5Q9NZZ3 219 aa13.32□□□□□ -0.28
TTC8-208ENST00000553718 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
TTC8-208ENST00000553718 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
TTC8-208ENST00000553718 KDM3BQ7LBC6 1761 aa13.31□□□□□ -0.28
TTC8-208ENST00000553718 RNMTO43148 476 aaKnown RBP13.31□□□□□ -0.28
TTC8-208ENST00000553718 RAB11FIP3O75154 756 aa13.31□□□□□ -0.28
TTC8-208ENST00000553718 C1orf141Q5JVX7 400 aa13.31□□□□□ -0.28
TTC8-208ENST00000553718 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
TTC8-208ENST00000553718 TBC1D9Q6ZT07 1266 aa13.31□□□□□ -0.28
TTC8-208ENST00000553718 SRCIN1Q9C0H9 1055 aa13.31□□□□□ -0.28
TTC8-208ENST00000553718 TEFQ10587 303 aa13.3□□□□□ -0.28
TTC8-208ENST00000553718 ANKRD24Q8TF21 1146 aa13.3□□□□□ -0.28
TTC8-208ENST00000553718 AOX1Q06278 1338 aa13.3□□□□□ -0.28
TTC8-208ENST00000553718 ADAMTS7Q9UKP4 1686 aa13.3□□□□□ -0.28
TTC8-208ENST00000553718 ALS2Q96Q42 1657 aa13.29□□□□□ -0.28
TTC8-208ENST00000553718 GSPT1P15170 499 aaKnown RBP13.29□□□□□ -0.28
TTC8-208ENST00000553718 ATF3P18847 181 aa13.29□□□□□ -0.28
TTC8-208ENST00000553718 GSE1Q14687 1217 aa13.29□□□□□ -0.28
TTC8-208ENST00000553718 ZNF530Q6P9A1 599 aaPredicted RBP13.29□□□□□ -0.28
TTC8-208ENST00000553718 SLC4A10Q6U841 1118 aa13.29□□□□□ -0.28
TTC8-208ENST00000553718 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
TTC8-208ENST00000553718 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
TTC8-208ENST00000553718 F6X3S4 739 aa13.28□□□□□ -0.28
TTC8-208ENST00000553718 ALDH1L1O75891 902 aa13.28□□□□□ -0.28
TTC8-208ENST00000553718 HSP90AB4PQ58FF6 505 aa13.28□□□□□ -0.28
TTC8-208ENST00000553718 SSH3Q8TE77 659 aa13.28□□□□□ -0.28
TTC8-208ENST00000553718 DBF4Q9UBU7 674 aaPredicted RBP13.28□□□□□ -0.28
TTC8-208ENST00000553718 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
TTC8-208ENST00000553718 NPHP3Q7Z494 1330 aa13.28□□□□□ -0.28
TTC8-208ENST00000553718 REC8O95072 547 aa13.27□□□□□ -0.29
TTC8-208ENST00000553718 UBTFL1P0CB47 393 aaPredicted RBP13.27□□□□□ -0.29
TTC8-208ENST00000553718 RABEP1Q15276 862 aa13.27□□□□□ -0.29
TTC8-208ENST00000553718 LRRCC1Q9C099 1032 aa13.27□□□□□ -0.29
TTC8-208ENST00000553718 USP44Q9H0E7 712 aa13.27□□□□□ -0.29
TTC8-208ENST00000553718 LGR6Q9HBX8 967 aa13.27□□□□□ -0.29
TTC8-208ENST00000553718 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
TTC8-208ENST00000553718 PTMSP20962 102 aa13.26□□□□□ -0.29
TTC8-208ENST00000553718 ERBB3P21860 1342 aa13.26□□□□□ -0.29
TTC8-208ENST00000553718 DDIT3P35638 169 aa13.26□□□□□ -0.29
TTC8-208ENST00000553718 PDE1AP54750 535 aa13.26□□□□□ -0.29
TTC8-208ENST00000553718 POLA2Q14181 598 aa13.26□□□□□ -0.29
TTC8-208ENST00000553718 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
TTC8-208ENST00000553718 DNAAF4Q8WXU2 420 aa13.26□□□□□ -0.29
TTC8-208ENST00000553718 KIF2CQ99661 725 aa13.26□□□□□ -0.29
TTC8-208ENST00000553718 TMEM94Q12767 1356 aa13.25□□□□□ -0.29
TTC8-208ENST00000553718 SDSP20132 328 aa13.25□□□□□ -0.29
TTC8-208ENST00000553718 MTX1Q13505 466 aa13.25□□□□□ -0.29
TTC8-208ENST00000553718 BEND3Q5T5X7 828 aa13.25□□□□□ -0.29
TTC8-208ENST00000553718 USP26Q9BXU7 913 aa13.25□□□□□ -0.29
TTC8-208ENST00000553718 HYPKQ9NX55 129 aa13.25□□□□□ -0.29
TTC8-208ENST00000553718 CPDO75976 1380 aa13.24□□□□□ -0.29
TTC8-208ENST00000553718 GIGYF1O75420 1035 aaPredicted RBP13.24□□□□□ -0.29
TTC8-208ENST00000553718 FRAT2O75474 233 aaPredicted RBP13.24□□□□□ -0.29
TTC8-208ENST00000553718 HSP90AB1P08238 724 aaKnown RBP13.24□□□□□ -0.29
TTC8-208ENST00000553718 C16orf71Q8IYS4 520 aaPredicted RBP13.24□□□□□ -0.29
TTC8-208ENST00000553718 LRRC59Q96AG4 307 aaKnown RBP13.24□□□□□ -0.29
TTC8-208ENST00000553718 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
TTC8-208ENST00000553718 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
TTC8-208ENST00000553718 K7ELQ4 463 aaPredicted RBP13.23□□□□□ -0.29
TTC8-208ENST00000553718 TATP17735 454 aaPredicted RBP13.23□□□□□ -0.29
TTC8-208ENST00000553718 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
TTC8-208ENST00000553718 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
TTC8-208ENST00000553718 IL17RAQ96F46 866 aa13.23□□□□□ -0.29
TTC8-208ENST00000553718 ERC2O15083 957 aa13.22□□□□□ -0.29
TTC8-208ENST00000553718 DDX58O95786 925 aaKnown RBP13.22□□□□□ -0.29
TTC8-208ENST00000553718 KIF1BPQ96EK5 621 aa13.22□□□□□ -0.29
TTC8-208ENST00000553718 SLKQ9H2G2 1235 aaPredicted RBP13.22□□□□□ -0.29
TTC8-208ENST00000553718 PHAXQ9H814 394 aaKnown RBP13.22□□□□□ -0.29
TTC8-208ENST00000553718 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
TTC8-208ENST00000553718 TNS3Q68CZ2 1445 aa13.22□□□□□ -0.29
TTC8-208ENST00000553718 UTYO14607 1347 aa13.21□□□□□ -0.29
TTC8-208ENST00000553718 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.29
TTC8-208ENST00000553718 MX1P20591 662 aa13.21□□□□□ -0.29
TTC8-208ENST00000553718 MPRIPQ6WCQ1 1025 aa13.21□□□□□ -0.29
TTC8-208ENST00000553718 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
TTC8-208ENST00000553718 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.29
TTC8-208ENST00000553718 LRRFIP2Q9Y608 721 aaKnown RBP13.21□□□□□ -0.29
TTC8-208ENST00000553718 SIPA1L3O60292 1781 aaPredicted RBP13.21□□□□□ -0.29
TTC8-208ENST00000553718 RGPD2P0DJD1 1756 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms