RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 ZBTB22O15209 634 aa10.61□□□□□ -0.71
SNRPN-206ENST00000553597 EN1Q05925 392 aaPredicted RBP10.61□□□□□ -0.71
SNRPN-206ENST00000553597 AKAP4Q5JQC9 854 aa10.61□□□□□ -0.71
SNRPN-206ENST00000553597 MCM10Q7L590 875 aa10.61□□□□□ -0.71
SNRPN-206ENST00000553597 LGR6Q9HBX8 967 aa10.61□□□□□ -0.71
SNRPN-206ENST00000553597 TMOD3Q9NYL9 352 aa10.61□□□□□ -0.71
SNRPN-206ENST00000553597 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
SNRPN-206ENST00000553597 KDM3BQ7LBC6 1761 aa10.61□□□□□ -0.71
SNRPN-206ENST00000553597 PLEKHG2Q9H7P9 1386 aa10.61□□□□□ -0.71
SNRPN-206ENST00000553597 MRC1P22897 1456 aa10.61□□□□□ -0.71
SNRPN-206ENST00000553597 UBR2Q8IWV8 1755 aa10.6□□□□□ -0.71
SNRPN-206ENST00000553597 GNAT3A8MTJ3 354 aa10.6□□□□□ -0.71
SNRPN-206ENST00000553597 RNMTO43148 476 aaKnown RBP10.6□□□□□ -0.71
SNRPN-206ENST00000553597 BAG6P46379 1132 aa10.6□□□□□ -0.71
SNRPN-206ENST00000553597 CABP4P57796 275 aa10.6□□□□□ -0.71
SNRPN-206ENST00000553597 NFE2L2Q16236 605 aa10.6□□□□□ -0.71
SNRPN-206ENST00000553597 PNISRQ8TF01 805 aaKnown RBP10.6□□□□□ -0.71
SNRPN-206ENST00000553597 RTF1Q92541 710 aaKnown RBP10.6□□□□□ -0.71
SNRPN-206ENST00000553597 RUNDC1Q96C34 613 aa10.6□□□□□ -0.71
SNRPN-206ENST00000553597 DCAF5Q96JK2 942 aa10.6□□□□□ -0.71
SNRPN-206ENST00000553597 THUMPD2Q9BTF0 503 aaKnown RBP10.6□□□□□ -0.71
SNRPN-206ENST00000553597 PNNQ9H307 717 aaKnown RBP10.6□□□□□ -0.71
SNRPN-206ENST00000553597 BCL9O00512 1426 aa10.59□□□□□ -0.71
SNRPN-206ENST00000553597 TJP1Q07157 1748 aa10.59□□□□□ -0.71
SNRPN-206ENST00000553597 APAF1O14727 1248 aa10.59□□□□□ -0.71
SNRPN-206ENST00000553597 HSP90AB1P08238 724 aaKnown RBP10.59□□□□□ -0.71
SNRPN-206ENST00000553597 KCNQ4P56696 695 aa10.59□□□□□ -0.71
SNRPN-206ENST00000553597 EZH2Q15910 746 aaKnown RBP10.59□□□□□ -0.71
SNRPN-206ENST00000553597 BCL11BQ9C0K0 894 aaPredicted RBP10.59□□□□□ -0.71
SNRPN-206ENST00000553597 CCER2I3L3R5 266 aa10.58□□□□□ -0.72
SNRPN-206ENST00000553597 TMPOP42166 694 aaKnown RBP10.58□□□□□ -0.72
SNRPN-206ENST00000553597 RIPK4P57078 832 aa10.58□□□□□ -0.72
SNRPN-206ENST00000553597 TEFQ10587 303 aa10.58□□□□□ -0.72
SNRPN-206ENST00000553597 NKX1-1Q15270 411 aaPredicted RBP10.58□□□□□ -0.72
SNRPN-206ENST00000553597 PIGBQ92521 554 aa10.58□□□□□ -0.72
SNRPN-206ENST00000553597 COL5A3P25940 1745 aaPredicted RBP10.58□□□□□ -0.72
SNRPN-206ENST00000553597 PALLDQ8WX93 1383 aa10.57□□□□□ -0.72
SNRPN-206ENST00000553597 NFATC2IPQ8NCF5 419 aa10.57□□□□□ -0.72
SNRPN-206ENST00000553597 IL17REQ8NFR9 667 aa10.57□□□□□ -0.72
SNRPN-206ENST00000553597 ASAP1Q9ULH1 1129 aa10.57□□□□□ -0.72
SNRPN-206ENST00000553597 LAMB4A4D0S4 1761 aa10.57□□□□□ -0.72
SNRPN-206ENST00000553597 SLC39A6Q13433 755 aa10.56□□□□□ -0.72
SNRPN-206ENST00000553597 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
SNRPN-206ENST00000553597 SLC52A2Q9HAB3 445 aa10.56□□□□□ -0.72
SNRPN-206ENST00000553597 LAS1LQ9Y4W2 734 aaKnown RBP10.56□□□□□ -0.72
SNRPN-206ENST00000553597 KCPQ6ZWJ8 1503 aa10.55□□□□□ -0.72
SNRPN-206ENST00000553597 ERVV-2B6SEH9 535 aa10.55□□□□□ -0.72
SNRPN-206ENST00000553597 PTCD1O75127 700 aaKnown RBP10.55□□□□□ -0.72
SNRPN-206ENST00000553597 MIS18AQ9NYP9 233 aa10.55□□□□□ -0.72
SNRPN-206ENST00000553597 C4BP0C0L5 1744 aa10.55□□□□□ -0.72
SNRPN-206ENST00000553597 CEMIPQ8WUJ3 1361 aa10.54□□□□□ -0.72
SNRPN-206ENST00000553597 CCDC125Q86Z20 511 aa10.54□□□□□ -0.72
SNRPN-206ENST00000553597 UBR3Q6ZT12 1888 aa10.53□□□□□ -0.72
SNRPN-206ENST00000553597 KCNQ3O43525 872 aa10.53□□□□□ -0.72
SNRPN-206ENST00000553597 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
SNRPN-206ENST00000553597 TXNRD1Q16881 649 aa10.53□□□□□ -0.72
SNRPN-206ENST00000553597 CAMKK2Q96RR4 588 aa10.53□□□□□ -0.72
SNRPN-206ENST00000553597 ATG3Q9NT62 314 aa10.53□□□□□ -0.72
SNRPN-206ENST00000553597 CCNL1Q9UK58 526 aaPredicted RBP10.53□□□□□ -0.72
SNRPN-206ENST00000553597 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
SNRPN-206ENST00000553597 MYH14Q7Z406 1995 aaKnown RBP10.52□□□□□ -0.72
SNRPN-206ENST00000553597 BTBD11A6QL63 1104 aa10.52□□□□□ -0.73
SNRPN-206ENST00000553597 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
SNRPN-206ENST00000553597 ZNF831Q5JPB2 1677 aa10.52□□□□□ -0.73
SNRPN-206ENST00000553597 C4AP0C0L4 1744 aa10.52□□□□□ -0.73
SNRPN-206ENST00000553597 CICQ96RK0 1608 aaPredicted RBP10.51□□□□□ -0.73
SNRPN-206ENST00000553597 SMARCC1Q92922 1105 aaPredicted RBP10.51□□□□□ -0.73
SNRPN-206ENST00000553597 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
SNRPN-206ENST00000553597 LRRC4BQ9NT99 713 aa10.51□□□□□ -0.73
SNRPN-206ENST00000553597 QSER1Q2KHR3 1735 aa10.5□□□□□ -0.73
SNRPN-206ENST00000553597 LOC102724428A0A0B4J2F2 783 aa10.5□□□□□ -0.73
SNRPN-206ENST00000553597 PSDA5PKW4 1024 aaPredicted RBP10.5□□□□□ -0.73
SNRPN-206ENST00000553597 PLSCR1O15162 318 aa10.5□□□□□ -0.73
SNRPN-206ENST00000553597 HTATSF1O43719 755 aaKnown RBP10.5□□□□□ -0.73
SNRPN-206ENST00000553597 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
SNRPN-206ENST00000553597 SIK1P57059 783 aa10.5□□□□□ -0.73
SNRPN-206ENST00000553597 PROM2Q8N271 834 aa10.5□□□□□ -0.73
SNRPN-206ENST00000553597 TSPYL4Q9UJ04 414 aa10.5□□□□□ -0.73
SNRPN-206ENST00000553597 ITPK1Q13572 414 aa10.49□□□□□ -0.73
SNRPN-206ENST00000553597 TAF7Q15545 349 aaPredicted RBP10.49□□□□□ -0.73
SNRPN-206ENST00000553597 ZNF790Q6PG37 636 aa10.49□□□□□ -0.73
SNRPN-206ENST00000553597 SMIM5Q71RC9 77 aa10.49□□□□□ -0.73
SNRPN-206ENST00000553597 CASZ1Q86V15 1759 aa10.48□□□□□ -0.73
SNRPN-206ENST00000553597 PRAMEF22A3QJZ6 481 aa10.48□□□□□ -0.73
SNRPN-206ENST00000553597 HNRNPUQ00839 825 aaKnown RBP eCLIP10.48□□□□□ -0.73
SNRPN-206ENST00000553597 R3HDM1Q15032 1099 aaKnown RBP10.48□□□□□ -0.73
SNRPN-206ENST00000553597 ZNF827Q17R98 1081 aa10.48□□□□□ -0.73
SNRPN-206ENST00000553597 KRT24Q2M2I5 525 aa10.48□□□□□ -0.73
SNRPN-206ENST00000553597 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
SNRPN-206ENST00000553597 DNAJC10Q8IXB1 793 aa10.48□□□□□ -0.73
SNRPN-206ENST00000553597 LINC00116Q8NCU8 138 aa10.48□□□□□ -0.73
SNRPN-206ENST00000553597 ZNF496Q96IT1 587 aaPredicted RBP10.48□□□□□ -0.73
SNRPN-206ENST00000553597 SLC4A9Q96Q91 983 aa10.48□□□□□ -0.73
SNRPN-206ENST00000553597 PHF14O94880 888 aa10.47□□□□□ -0.73
SNRPN-206ENST00000553597 TSR2Q969E8 191 aaKnown RBP10.47□□□□□ -0.73
SNRPN-206ENST00000553597 YTHDC1Q96MU7 727 aaKnown RBP10.47□□□□□ -0.73
SNRPN-206ENST00000553597 STK32BQ9NY57 414 aa10.47□□□□□ -0.73
SNRPN-206ENST00000553597 ZNF330Q9Y3S2 320 aaPredicted RBP10.47□□□□□ -0.73
SNRPN-206ENST00000553597 HEG1Q9ULI3 1381 aa10.47□□□□□ -0.73
SNRPN-206ENST00000553597 PIP4K2AP48426 406 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms