RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 NGDNQ8NEJ9 315 aaKnown RBP9.48□□□□□ -0.89
ATXN3-221ENST00000553498 CCDC136Q96JN2 1154 aa9.48□□□□□ -0.89
ATXN3-221ENST00000553498 TOPAZ1Q8N9V7 1692 aa9.48□□□□□ -0.89
ATXN3-221ENST00000553498 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-221ENST00000553498 NCOA3Q9Y6Q9 1424 aa9.48□□□□□ -0.89
ATXN3-221ENST00000553498 TK2O00142 265 aa9.47□□□□□ -0.89
ATXN3-221ENST00000553498 HRO43593 1189 aa9.47□□□□□ -0.89
ATXN3-221ENST00000553498 IL13P35225 146 aa9.47□□□□□ -0.89
ATXN3-221ENST00000553498 TMPOP42166 694 aaKnown RBP9.47□□□□□ -0.89
ATXN3-221ENST00000553498 PDE3AQ14432 1141 aa9.47□□□□□ -0.89
ATXN3-221ENST00000553498 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
ATXN3-221ENST00000553498 ZNF428Q96B54 188 aa9.47□□□□□ -0.89
ATXN3-221ENST00000553498 MON2Q7Z3U7 1717 aa9.47□□□□□ -0.89
ATXN3-221ENST00000553498 ADGRL3Q9HAR2 1447 aa9.47□□□□□ -0.89
ATXN3-221ENST00000553498 COL9A1P20849 921 aa9.46□□□□□ -0.9
ATXN3-221ENST00000553498 OSBPP22059 807 aa9.46□□□□□ -0.9
ATXN3-221ENST00000553498 SLC4A5Q9BY07 1137 aa9.46□□□□□ -0.9
ATXN3-221ENST00000553498 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
ATXN3-221ENST00000553498 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
ATXN3-221ENST00000553498 MS4A1P11836 297 aa9.45□□□□□ -0.9
ATXN3-221ENST00000553498 EN1Q05925 392 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-221ENST00000553498 C6orf132Q5T0Z8 1188 aa9.45□□□□□ -0.9
ATXN3-221ENST00000553498 ZBED2Q9BTP6 218 aa9.45□□□□□ -0.9
ATXN3-221ENST00000553498 NRKQ7Z2Y5 1582 aa9.45□□□□□ -0.9
ATXN3-221ENST00000553498 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
ATXN3-221ENST00000553498 GRXCR2A6NFK2 248 aa9.44□□□□□ -0.9
ATXN3-221ENST00000553498 MLLT3P42568 568 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-221ENST00000553498 NBR1Q14596 966 aa9.44□□□□□ -0.9
ATXN3-221ENST00000553498 NFE2L2Q16236 605 aa9.44□□□□□ -0.9
ATXN3-221ENST00000553498 VPS9D1Q9Y2B5 631 aa9.44□□□□□ -0.9
ATXN3-221ENST00000553498 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
ATXN3-221ENST00000553498 SBNO1A3KN83 1393 aa9.44□□□□□ -0.9
ATXN3-221ENST00000553498 AKAP12Q02952 1782 aa9.43□□□□□ -0.9
ATXN3-221ENST00000553498 NWD1Q149M9 1564 aa9.43□□□□□ -0.9
ATXN3-221ENST00000553498 FLT4P35916 1363 aa9.43□□□□□ -0.9
ATXN3-221ENST00000553498 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
ATXN3-221ENST00000553498 PPM1GO15355 546 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-221ENST00000553498 PRKAR2BP31323 418 aa9.43□□□□□ -0.9
ATXN3-221ENST00000553498 RIPK4P57078 832 aa9.43□□□□□ -0.9
ATXN3-221ENST00000553498 NEUROD2Q15784 382 aa9.43□□□□□ -0.9
ATXN3-221ENST00000553498 B4GALNT3Q6L9W6 998 aa9.43□□□□□ -0.9
ATXN3-221ENST00000553498 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
ATXN3-221ENST00000553498 RTL1A6NKG5 1358 aa9.42□□□□□ -0.9
ATXN3-221ENST00000553498 ARHGEF10O15013 1369 aa9.42□□□□□ -0.9
ATXN3-221ENST00000553498 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
ATXN3-221ENST00000553498 EXOC6Q8TAG9 804 aa9.42□□□□□ -0.9
ATXN3-221ENST00000553498 RBM33Q96EV2 1170 aaKnown RBP9.42□□□□□ -0.9
ATXN3-221ENST00000553498 RRP7AQ9Y3A4 280 aaKnown RBP9.42□□□□□ -0.9
ATXN3-221ENST00000553498 DCCP43146 1447 aa9.41□□□□□ -0.9
ATXN3-221ENST00000553498 BHMG1C9JSJ3 638 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-221ENST00000553498 RARSP54136 660 aaKnown RBP9.41□□□□□ -0.9
ATXN3-221ENST00000553498 GNAI1P63096 354 aa9.41□□□□□ -0.9
ATXN3-221ENST00000553498 KCNH5Q8NCM2 988 aa9.41□□□□□ -0.9
ATXN3-221ENST00000553498 PMFBP1Q8TBY8 1022 aa9.41□□□□□ -0.9
ATXN3-221ENST00000553498 IFT57Q9NWB7 429 aa9.41□□□□□ -0.9
ATXN3-221ENST00000553498 FMN2Q9NZ56 1722 aa9.4□□□□□ -0.9
ATXN3-221ENST00000553498 FANCIQ9NVI1 1328 aa9.4□□□□□ -0.9
ATXN3-221ENST00000553498 NUTM2FA1L443 756 aa9.4□□□□□ -0.9
ATXN3-221ENST00000553498 SEMA3EO15041 775 aa9.4□□□□□ -0.9
ATXN3-221ENST00000553498 BRPF1P55201 1214 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-221ENST00000553498 EIF4A2Q14240 407 aaKnown RBP9.4□□□□□ -0.9
ATXN3-221ENST00000553498 RRS1Q15050 365 aaKnown RBP9.4□□□□□ -0.9
ATXN3-221ENST00000553498 ALDH1L2Q3SY69 923 aa9.4□□□□□ -0.9
ATXN3-221ENST00000553498 C19orf44Q9H6X5 657 aa9.4□□□□□ -0.9
ATXN3-221ENST00000553498 SETD1BQ9UPS6 1966 aaKnown RBP9.39□□□□□ -0.91
ATXN3-221ENST00000553498 CANXP27824 592 aaKnown RBP9.39□□□□□ -0.91
ATXN3-221ENST00000553498 CENPQQ7L2Z9 268 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-221ENST00000553498 CRBNQ96SW2 442 aa9.39□□□□□ -0.91
ATXN3-221ENST00000553498 MST1RQ04912 1400 aa9.39□□□□□ -0.91
ATXN3-221ENST00000553498 KDRP35968 1356 aa9.38□□□□□ -0.91
ATXN3-221ENST00000553498 MAP3K19Q56UN5 1328 aa9.38□□□□□ -0.91
ATXN3-221ENST00000553498 TCERG1O14776 1098 aaKnown RBP9.38□□□□□ -0.91
ATXN3-221ENST00000553498 IPO8O15397 1037 aaKnown RBP9.38□□□□□ -0.91
ATXN3-221ENST00000553498 HTATSF1O43719 755 aaKnown RBP9.38□□□□□ -0.91
ATXN3-221ENST00000553498 PLIN1O60240 522 aa9.38□□□□□ -0.91
ATXN3-221ENST00000553498 AMPHP49418 695 aa9.38□□□□□ -0.91
ATXN3-221ENST00000553498 C14orf37Q86TY3 774 aa9.38□□□□□ -0.91
ATXN3-221ENST00000553498 PROSER2Q86WR7 435 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-221ENST00000553498 ABTB2Q8N961 1025 aa9.38□□□□□ -0.91
ATXN3-221ENST00000553498 NALCNQ8IZF0 1738 aa9.38□□□□□ -0.91
ATXN3-221ENST00000553498 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
ATXN3-221ENST00000553498 CHD2O14647 1828 aaKnown RBP9.38□□□□□ -0.91
ATXN3-221ENST00000553498 IGSF1Q8N6C5 1336 aa9.37□□□□□ -0.91
ATXN3-221ENST00000553498 KIF16BQ96L93 1317 aa9.37□□□□□ -0.91
ATXN3-221ENST00000553498 MAP3K7O43318 606 aa9.37□□□□□ -0.91
ATXN3-221ENST00000553498 BCAR3O75815 825 aa9.37□□□□□ -0.91
ATXN3-221ENST00000553498 ZNF853P0CG23 659 aa9.37□□□□□ -0.91
ATXN3-221ENST00000553498 PSME1Q06323 249 aa9.37□□□□□ -0.91
ATXN3-221ENST00000553498 PROX2Q3B8N5 592 aa9.37□□□□□ -0.91
ATXN3-221ENST00000553498 ESCO1Q5FWF5 840 aa9.37□□□□□ -0.91
ATXN3-221ENST00000553498 CHMP4BQ9H444 224 aaKnown RBP9.37□□□□□ -0.91
ATXN3-221ENST00000553498 HMOX1P09601 288 aa9.36□□□□□ -0.91
ATXN3-221ENST00000553498 FBLN1P23142 703 aa9.36□□□□□ -0.91
ATXN3-221ENST00000553498 HSP90AB2PQ58FF8 381 aa9.36□□□□□ -0.91
ATXN3-221ENST00000553498 ZKSCAN2Q63HK3 967 aa9.36□□□□□ -0.91
ATXN3-221ENST00000553498 SULT6B1Q6IMI4 303 aa9.36□□□□□ -0.91
ATXN3-221ENST00000553498 GAS2L2Q8NHY3 880 aa9.36□□□□□ -0.91
ATXN3-221ENST00000553498 PHACTR3Q96KR7 559 aa9.36□□□□□ -0.91
ATXN3-221ENST00000553498 CDHR5Q9HBB8 845 aa9.36□□□□□ -0.91
ATXN3-221ENST00000553498 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms