RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 HSPA1LP34931 641 aa16.05■□□□□ 0.16
SHMT2-205ENST00000553474 FAM208AQ9UK61 1670 aaKnown RBP16.04■□□□□ 0.16
SHMT2-205ENST00000553474 SOX12O15370 315 aa16.04■□□□□ 0.16
SHMT2-205ENST00000553474 HOXC9P31274 260 aa16.04■□□□□ 0.16
SHMT2-205ENST00000553474 CEP85Q6P2H3 762 aa16.04■□□□□ 0.16
SHMT2-205ENST00000553474 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
SHMT2-205ENST00000553474 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
SHMT2-205ENST00000553474 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
SHMT2-205ENST00000553474 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
SHMT2-205ENST00000553474 CIZ1Q9ULV3 898 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-205ENST00000553474 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
SHMT2-205ENST00000553474 TBC1D9Q6ZT07 1266 aa16.03■□□□□ 0.16
SHMT2-205ENST00000553474 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
SHMT2-205ENST00000553474 FBXO41Q8TF61 875 aa16.03■□□□□ 0.16
SHMT2-205ENST00000553474 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
SHMT2-205ENST00000553474 LTN1O94822 1766 aa16.02■□□□□ 0.16
SHMT2-205ENST00000553474 MED1Q15648 1581 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-205ENST00000553474 MAP3K5Q99683 1374 aa16.02■□□□□ 0.15
SHMT2-205ENST00000553474 COL22A1Q8NFW1 1626 aaPredicted RBP16.02■□□□□ 0.15
SHMT2-205ENST00000553474 CCDC30Q5VVM6 783 aa16.01■□□□□ 0.15
SHMT2-205ENST00000553474 KRT24Q2M2I5 525 aa16■□□□□ 0.15
SHMT2-205ENST00000553474 TTC22Q5TAA0 569 aa16■□□□□ 0.15
SHMT2-205ENST00000553474 CABLES1Q8TDN4 633 aa16■□□□□ 0.15
SHMT2-205ENST00000553474 CASC1Q6TDU7 716 aa16■□□□□ 0.15
SHMT2-205ENST00000553474 SLIT3O75094 1523 aa15.99■□□□□ 0.15
SHMT2-205ENST00000553474 ZBTB7CA1YPR0 619 aa15.98■□□□□ 0.15
SHMT2-205ENST00000553474 GNAI3P08754 354 aa15.98■□□□□ 0.15
SHMT2-205ENST00000553474 DDIT3P35638 169 aa15.98■□□□□ 0.15
SHMT2-205ENST00000553474 TAF7Q15545 349 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-205ENST00000553474 KCNH5Q8NCM2 988 aa15.98■□□□□ 0.15
SHMT2-205ENST00000553474 MEIS3Q99687 375 aa15.98■□□□□ 0.15
SHMT2-205ENST00000553474 OSBPL3Q9H4L5 887 aa15.98■□□□□ 0.15
SHMT2-205ENST00000553474 NFAT5O94916 1531 aa15.97■□□□□ 0.15
SHMT2-205ENST00000553474 JCADQ9P266 1359 aa15.97■□□□□ 0.15
SHMT2-205ENST00000553474 GSPT1P15170 499 aaKnown RBP15.97■□□□□ 0.15
SHMT2-205ENST00000553474 PTMSP20962 102 aa15.97■□□□□ 0.15
SHMT2-205ENST00000553474 MCM4P33991 863 aa15.97■□□□□ 0.15
SHMT2-205ENST00000553474 KIF2CQ99661 725 aa15.97■□□□□ 0.15
SHMT2-205ENST00000553474 NUTM2BA6NNL0 878 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-205ENST00000553474 DDX11L8A8MPP1 907 aa15.96■□□□□ 0.15
SHMT2-205ENST00000553474 NUTM2EB1AL46 878 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-205ENST00000553474 GNAI2P04899 355 aa15.96■□□□□ 0.15
SHMT2-205ENST00000553474 NUTM2AQ8IVF1 878 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-205ENST00000553474 IP6K1Q92551 441 aa15.96■□□□□ 0.15
SHMT2-205ENST00000553474 HOXB7P09629 217 aa15.95■□□□□ 0.14
SHMT2-205ENST00000553474 CEMIPQ8WUJ3 1361 aa15.95■□□□□ 0.14
SHMT2-205ENST00000553474 FLIIQ13045 1269 aa15.95■□□□□ 0.14
SHMT2-205ENST00000553474 RABEP1Q15276 862 aa15.95■□□□□ 0.14
SHMT2-205ENST00000553474 K7ELQ4 463 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-205ENST00000553474 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
SHMT2-205ENST00000553474 L1TD1Q5T7N2 865 aaKnown RBP15.94■□□□□ 0.14
SHMT2-205ENST00000553474 MIS18AQ9NYP9 233 aa15.94■□□□□ 0.14
SHMT2-205ENST00000553474 LMO7Q8WWI1 1683 aa15.94■□□□□ 0.14
SHMT2-205ENST00000553474 RGPD5Q99666 1765 aa15.93■□□□□ 0.14
SHMT2-205ENST00000553474 OVOS2A0A0G2JMS6 1433 aa15.93■□□□□ 0.14
SHMT2-205ENST00000553474 KDM3BQ7LBC6 1761 aa15.93■□□□□ 0.14
SHMT2-205ENST00000553474 REC8O95072 547 aa15.92■□□□□ 0.14
SHMT2-205ENST00000553474 GCP02774 474 aa15.92■□□□□ 0.14
SHMT2-205ENST00000553474 ZC3H6P61129 1189 aaKnown RBP15.92■□□□□ 0.14
SHMT2-205ENST00000553474 IL27Q8NEV9 243 aa15.92■□□□□ 0.14
SHMT2-205ENST00000553474 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
SHMT2-205ENST00000553474 NCAPD2Q15021 1401 aa15.92■□□□□ 0.14
SHMT2-205ENST00000553474 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-205ENST00000553474 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
SHMT2-205ENST00000553474 G2E3Q7L622 706 aa15.92■□□□□ 0.14
SHMT2-205ENST00000553474 GBP4Q96PP9 640 aa15.91■□□□□ 0.14
SHMT2-205ENST00000553474 ISY1Q9ULR0 285 aaKnown RBP15.91■□□□□ 0.14
SHMT2-205ENST00000553474 TUBGCP6Q96RT7 1819 aa15.91■□□□□ 0.14
SHMT2-205ENST00000553474 PLCH1Q4KWH8 1693 aa15.91■□□□□ 0.14
SHMT2-205ENST00000553474 ADAMTS2O95450 1211 aa15.9■□□□□ 0.14
SHMT2-205ENST00000553474 USP26Q9BXU7 913 aa15.9■□□□□ 0.14
SHMT2-205ENST00000553474 SRCIN1Q9C0H9 1055 aa15.9■□□□□ 0.14
SHMT2-205ENST00000553474 LRP6O75581 1613 aa15.9■□□□□ 0.14
SHMT2-205ENST00000553474 HSP90AA1P07900 732 aaKnown RBP15.9■□□□□ 0.14
SHMT2-205ENST00000553474 SDSP20132 328 aa15.9■□□□□ 0.14
SHMT2-205ENST00000553474 ATP8B2P98198 1209 aa15.9■□□□□ 0.14
SHMT2-205ENST00000553474 F6X3S4 739 aa15.89■□□□□ 0.13
SHMT2-205ENST00000553474 RAB3GAP1Q15042 981 aa15.89■□□□□ 0.13
SHMT2-205ENST00000553474 AMOTQ4VCS5 1084 aa15.89■□□□□ 0.13
SHMT2-205ENST00000553474 AOX1Q06278 1338 aa15.88■□□□□ 0.13
SHMT2-205ENST00000553474 CAMTA1Q9Y6Y1 1673 aa15.88■□□□□ 0.13
SHMT2-205ENST00000553474 EPB41L2O43491 1005 aaKnown RBP15.88■□□□□ 0.13
SHMT2-205ENST00000553474 CLEC17AQ6ZS10 378 aa15.88■□□□□ 0.13
SHMT2-205ENST00000553474 C16orf71Q8IYS4 520 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-205ENST00000553474 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
SHMT2-205ENST00000553474 LRRCC1Q9C099 1032 aa15.88■□□□□ 0.13
SHMT2-205ENST00000553474 PRDM11Q9NQV5 511 aa15.88■□□□□ 0.13
SHMT2-205ENST00000553474 IBTKQ9P2D0 1353 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-205ENST00000553474 SPATA31A6Q5VVP1 1343 aa15.88■□□□□ 0.13
SHMT2-205ENST00000553474 COL14A1Q05707 1796 aaKnown RBP15.88■□□□□ 0.13
SHMT2-205ENST00000553474 PDE1AP54750 535 aa15.87■□□□□ 0.13
SHMT2-205ENST00000553474 CHRNA2Q15822 529 aa15.87■□□□□ 0.13
SHMT2-205ENST00000553474 SKOR2Q2VWA4 1001 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-205ENST00000553474 SALL3Q9BXA9 1300 aa15.87■□□□□ 0.13
SHMT2-205ENST00000553474 ERC2O15083 957 aa15.87■□□□□ 0.13
SHMT2-205ENST00000553474 AKAP4Q5JQC9 854 aa15.87■□□□□ 0.13
SHMT2-205ENST00000553474 HDGFL1Q5TGJ6 251 aa15.87■□□□□ 0.13
SHMT2-205ENST00000553474 COL18A1P39060 1754 aa15.87■□□□□ 0.13
SHMT2-205ENST00000553474 TRAK2O60296 914 aa15.86■□□□□ 0.13
SHMT2-205ENST00000553474 PLEKHO1Q53GL0 409 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms