RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 WBP1LQ9NX94 342 aa6.31□□□□□ -1.4
PFDN5-219ENST00000553171 TERF2IPQ9NYB0 399 aa6.31□□□□□ -1.4
PFDN5-219ENST00000553171 CEP162Q5TB80 1403 aa6.31□□□□□ -1.4
PFDN5-219ENST00000553171 HSPA8P11142 646 aaKnown RBP6.3□□□□□ -1.4
PFDN5-219ENST00000553171 MYBPC2Q14324 1141 aa6.3□□□□□ -1.4
PFDN5-219ENST00000553171 TXNRD1Q16881 649 aa6.3□□□□□ -1.4
PFDN5-219ENST00000553171 ESCO1Q5FWF5 840 aa6.3□□□□□ -1.4
PFDN5-219ENST00000553171 C10orf71Q711Q0 1435 aa6.3□□□□□ -1.4
PFDN5-219ENST00000553171 RRBP1Q9P2E9 1410 aaKnown RBP6.3□□□□□ -1.4
PFDN5-219ENST00000553171 COL24A1Q17RW2 1714 aa6.3□□□□□ -1.4
PFDN5-219ENST00000553171 TPD52L2O43399 206 aaKnown RBP6.29□□□□□ -1.4
PFDN5-219ENST00000553171 BRD1O95696 1058 aa6.29□□□□□ -1.4
PFDN5-219ENST00000553171 PSEN1P49768 467 aa6.29□□□□□ -1.4
PFDN5-219ENST00000553171 FXR1P51114 621 aaKnown RBP eCLIP6.29□□□□□ -1.4
PFDN5-219ENST00000553171 SETDB1Q15047 1291 aa6.29□□□□□ -1.4
PFDN5-219ENST00000553171 NBPF9Q3BBW0 867 aa6.29□□□□□ -1.4
PFDN5-219ENST00000553171 BARGINQ6ZT62 677 aa6.29□□□□□ -1.4
PFDN5-219ENST00000553171 NALCNQ8IZF0 1738 aa6.29□□□□□ -1.4
PFDN5-219ENST00000553171 PMFBP1Q8TBY8 1022 aa6.29□□□□□ -1.4
PFDN5-219ENST00000553171 POTEFA5A3E0 1075 aa6.28□□□□□ -1.4
PFDN5-219ENST00000553171 TCERG1O14776 1098 aaKnown RBP6.28□□□□□ -1.4
PFDN5-219ENST00000553171 FOXD4L6Q3SYB3 417 aaPredicted RBP6.28□□□□□ -1.4
PFDN5-219ENST00000553171 HSP90AB3PQ58FF7 597 aa6.28□□□□□ -1.4
PFDN5-219ENST00000553171 TAF3Q5VWG9 929 aa6.28□□□□□ -1.4
PFDN5-219ENST00000553171 FOXD4L3Q6VB84 417 aaPredicted RBP6.28□□□□□ -1.4
PFDN5-219ENST00000553171 ZNF830Q96NB3 372 aaPredicted RBP6.28□□□□□ -1.4
PFDN5-219ENST00000553171 SH3BP1Q9Y3L3 701 aa6.28□□□□□ -1.4
PFDN5-219ENST00000553171 GOLIM4O00461 696 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 ANP32CO43423 234 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 RALBP1Q15311 655 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 PTF1AQ7RTS3 328 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 EGFL6Q8IUX8 553 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 SPNS2Q8IVW8 549 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 FAM43AQ8N2R8 423 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 NME8Q8N427 588 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 OTUD6BQ8N6M0 293 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 MS4A3Q96HJ5 214 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 CARD10Q9BWT7 1032 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 RBM19Q9Y4C8 960 aaKnown RBP6.27□□□□□ -1.41
PFDN5-219ENST00000553171 PXDNLA1KZ92 1463 aa6.27□□□□□ -1.41
PFDN5-219ENST00000553171 LRRIQ1Q96JM4 1722 aa6.26□□□□□ -1.41
PFDN5-219ENST00000553171 ABCA3Q99758 1704 aa6.26□□□□□ -1.41
PFDN5-219ENST00000553171 HSP90AA1P07900 732 aaKnown RBP6.26□□□□□ -1.41
PFDN5-219ENST00000553171 CCDC96Q2M329 555 aa6.26□□□□□ -1.41
PFDN5-219ENST00000553171 SDR16C5Q8N3Y7 309 aa6.26□□□□□ -1.41
PFDN5-219ENST00000553171 CCDC82Q8N4S0 544 aa6.26□□□□□ -1.41
PFDN5-219ENST00000553171 SPATA32Q96LK8 384 aa6.26□□□□□ -1.41
PFDN5-219ENST00000553171 CD2APQ9Y5K6 639 aa6.26□□□□□ -1.41
PFDN5-219ENST00000553171 CCNB3Q8WWL7 1395 aa6.26□□□□□ -1.41
PFDN5-219ENST00000553171 EIF2AK4Q9P2K8 1649 aaKnown RBP6.25□□□□□ -1.41
PFDN5-219ENST00000553171 SOX12O15370 315 aa6.25□□□□□ -1.41
PFDN5-219ENST00000553171 SMARCA5O60264 1052 aaPredicted RBP6.25□□□□□ -1.41
PFDN5-219ENST00000553171 MARCH6O60337 910 aa6.25□□□□□ -1.41
PFDN5-219ENST00000553171 MNX1P50219 401 aaPredicted RBP6.25□□□□□ -1.41
PFDN5-219ENST00000553171 HDAC1Q13547 482 aaPredicted RBP6.25□□□□□ -1.41
PFDN5-219ENST00000553171 KRT28Q7Z3Y7 464 aa6.25□□□□□ -1.41
PFDN5-219ENST00000553171 MKL1Q969V6 931 aa6.25□□□□□ -1.41
PFDN5-219ENST00000553171 TMEM51Q9NW97 253 aa6.25□□□□□ -1.41
PFDN5-219ENST00000553171 MKRN1Q9UHC7 482 aaKnown RBP6.25□□□□□ -1.41
PFDN5-219ENST00000553171 FEZ2Q9UHY8 353 aaPredicted RBP6.25□□□□□ -1.41
PFDN5-219ENST00000553171 SUPT16HQ9Y5B9 1047 aaKnown RBP6.25□□□□□ -1.41
PFDN5-219ENST00000553171 METP08581 1390 aa6.25□□□□□ -1.41
PFDN5-219ENST00000553171 KIF15Q9NS87 1388 aa6.25□□□□□ -1.41
PFDN5-219ENST00000553171 CCDC141Q6ZP82 1450 aa6.25□□□□□ -1.41
PFDN5-219ENST00000553171 CCDC18Q5T9S5 1454 aa6.24□□□□□ -1.41
PFDN5-219ENST00000553171 TSPAN18Q96SJ8 248 aa6.24□□□□□ -1.41
PFDN5-219ENST00000553171 MTA3Q9BTC8 594 aa6.24□□□□□ -1.41
PFDN5-219ENST00000553171 UBA5Q9GZZ9 404 aa6.24□□□□□ -1.41
PFDN5-219ENST00000553171 PPME1Q9Y570 386 aa6.24□□□□□ -1.41
PFDN5-219ENST00000553171 NUB1Q9Y5A7 615 aa6.24□□□□□ -1.41
PFDN5-219ENST00000553171 DUOX2Q9NRD8 1548 aa6.24□□□□□ -1.41
PFDN5-219ENST00000553171 CCDC144AA2RUR9 1427 aa6.24□□□□□ -1.41
PFDN5-219ENST00000553171 TNS3Q68CZ2 1445 aa6.24□□□□□ -1.41
PFDN5-219ENST00000553171 COL14A1Q05707 1796 aaKnown RBP6.23□□□□□ -1.41
PFDN5-219ENST00000553171 CNTNAP1P78357 1384 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 TSPY4P0CV99 314 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 TSPY10P0CW01 314 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 ATN1P54259 1190 aaPredicted RBP6.23□□□□□ -1.41
PFDN5-219ENST00000553171 MCCD1P59942 119 aaPredicted RBP6.23□□□□□ -1.41
PFDN5-219ENST00000553171 RBM26Q5T8P6 1007 aaKnown RBP6.23□□□□□ -1.41
PFDN5-219ENST00000553171 PLCD3Q8N3E9 789 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 FBXW7Q969H0 707 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 MCOLN1Q9GZU1 580 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 YY1AP1Q9H869 796 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 RRAGCQ9HB90 399 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 OVOS2A0A0G2JMS6 1433 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 OVOS2A0A0J9YW53 1432 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 OVOS2Q6IE36 1432 aa6.23□□□□□ -1.41
PFDN5-219ENST00000553171 CICQ96RK0 1608 aaPredicted RBP6.22□□□□□ -1.41
PFDN5-219ENST00000553171 PAK3O75914 559 aaPredicted RBP6.22□□□□□ -1.41
PFDN5-219ENST00000553171 SSR1P43307 286 aaKnown RBP6.22□□□□□ -1.41
PFDN5-219ENST00000553171 RGS3P49796 1198 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 ZNF827Q17R98 1081 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 WDR78Q5VTH9 848 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 LMOD2Q6P5Q4 547 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 APBB1IPQ7Z5R6 666 aaPredicted RBP6.22□□□□□ -1.41
PFDN5-219ENST00000553171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.22□□□□□ -1.41
PFDN5-219ENST00000553171 PDCL3Q9H2J4 239 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 BSDC1Q9NW68 430 aaPredicted RBP6.22□□□□□ -1.41
PFDN5-219ENST00000553171 RBM27Q9P2N5 1060 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms