RNA–Protein interactions for RNA: ENST00000553040.5

LMBR1L-229, Transcript of limb development membrane protein 1 like, humanhuman

TSL 5

Gene LMBR1L, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-229ENST00000553040 ITPK1Q13572 414 aa14.47□□□□□ -0.09
LMBR1L-229ENST00000553040 COL23A1Q86Y22 540 aaPredicted RBP14.47□□□□□ -0.09
LMBR1L-229ENST00000553040 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
LMBR1L-229ENST00000553040 SLC4A9Q96Q91 983 aa14.47□□□□□ -0.09
LMBR1L-229ENST00000553040 ATP6V1AP38606 617 aa14.46□□□□□ -0.09
LMBR1L-229ENST00000553040 SMIM5Q71RC9 77 aa14.46□□□□□ -0.09
LMBR1L-229ENST00000553040 AMIGO3Q86WK7 504 aa14.46□□□□□ -0.09
LMBR1L-229ENST00000553040 SLC16A10Q8TF71 515 aa14.46□□□□□ -0.09
LMBR1L-229ENST00000553040 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
LMBR1L-229ENST00000553040 RNMTO43148 476 aaKnown RBP14.45□□□□□ -0.1
LMBR1L-229ENST00000553040 MSH5O43196 834 aa14.45□□□□□ -0.1
LMBR1L-229ENST00000553040 HMGB2P26583 209 aaKnown RBP14.45□□□□□ -0.1
LMBR1L-229ENST00000553040 RSPH6AQ9H0K4 717 aa14.45□□□□□ -0.1
LMBR1L-229ENST00000553040 NUDCQ9Y266 331 aa14.45□□□□□ -0.1
LMBR1L-229ENST00000553040 UBR3Q6ZT12 1888 aa14.44□□□□□ -0.1
LMBR1L-229ENST00000553040 U2AF1L5P0DN76 240 aaPredicted RBP14.44□□□□□ -0.1
LMBR1L-229ENST00000553040 U2AF1Q01081 240 aaKnown RBP eCLIP14.44□□□□□ -0.1
LMBR1L-229ENST00000553040 PHACTR3Q96KR7 559 aa14.44□□□□□ -0.1
LMBR1L-229ENST00000553040 AK7Q96M32 723 aa14.44□□□□□ -0.1
LMBR1L-229ENST00000553040 SLC52A2Q9HAB3 445 aa14.44□□□□□ -0.1
LMBR1L-229ENST00000553040 COL24A1Q17RW2 1714 aa14.44□□□□□ -0.1
LMBR1L-229ENST00000553040 ADAMTS7Q9UKP4 1686 aa14.43□□□□□ -0.1
LMBR1L-229ENST00000553040 PTCD1O75127 700 aaKnown RBP14.43□□□□□ -0.1
LMBR1L-229ENST00000553040 PRKAR2BP31323 418 aa14.43□□□□□ -0.1
LMBR1L-229ENST00000553040 ARXQ96QS3 562 aa14.43□□□□□ -0.1
LMBR1L-229ENST00000553040 ZNF831Q5JPB2 1677 aa14.42□□□□□ -0.1
LMBR1L-229ENST00000553040 PHF14O94880 888 aa14.42□□□□□ -0.1
LMBR1L-229ENST00000553040 ZEB1P37275 1124 aaPredicted RBP14.41□□□□□ -0.1
LMBR1L-229ENST00000553040 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
LMBR1L-229ENST00000553040 FLAD1Q8NFF5 587 aa14.41□□□□□ -0.1
LMBR1L-229ENST00000553040 GAS2L2Q8NHY3 880 aa14.41□□□□□ -0.1
LMBR1L-229ENST00000553040 FHDC1Q9C0D6 1143 aaPredicted RBP14.41□□□□□ -0.1
LMBR1L-229ENST00000553040 MRC1P22897 1456 aa14.41□□□□□ -0.1
LMBR1L-229ENST00000553040 COL5A3P25940 1745 aaPredicted RBP14.41□□□□□ -0.1
LMBR1L-229ENST00000553040 MYH14Q7Z406 1995 aaKnown RBP14.4□□□□□ -0.1
LMBR1L-229ENST00000553040 MAP3K5Q99683 1374 aa14.4□□□□□ -0.1
LMBR1L-229ENST00000553040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.4□□□□□ -0.1
LMBR1L-229ENST00000553040 GNAT3A8MTJ3 354 aa14.4□□□□□ -0.1
LMBR1L-229ENST00000553040 GNPATO15228 680 aa14.4□□□□□ -0.1
LMBR1L-229ENST00000553040 FCHSD2O94868 740 aa14.4□□□□□ -0.1
LMBR1L-229ENST00000553040 POLD1P28340 1107 aa14.4□□□□□ -0.1
LMBR1L-229ENST00000553040 MSL1Q68DK7 614 aa14.4□□□□□ -0.1
LMBR1L-229ENST00000553040 IL17REQ8NFR9 667 aa14.4□□□□□ -0.1
LMBR1L-229ENST00000553040 SSFA2P28290 1259 aa14.39□□□□□ -0.11
LMBR1L-229ENST00000553040 RALBP1Q15311 655 aa14.39□□□□□ -0.11
LMBR1L-229ENST00000553040 SYT17Q9BSW7 474 aa14.39□□□□□ -0.11
LMBR1L-229ENST00000553040 TJP1Q07157 1748 aa14.38□□□□□ -0.11
LMBR1L-229ENST00000553040 RC3H1Q5TC82 1133 aaKnown RBP14.38□□□□□ -0.11
LMBR1L-229ENST00000553040 SIPA1L3O60292 1781 aaPredicted RBP14.37□□□□□ -0.11
LMBR1L-229ENST00000553040 TEFQ10587 303 aa14.36□□□□□ -0.11
LMBR1L-229ENST00000553040 RTCBQ9Y3I0 505 aaKnown RBP14.36□□□□□ -0.11
LMBR1L-229ENST00000553040 CNTNAP4Q9C0A0 1308 aa14.36□□□□□ -0.11
LMBR1L-229ENST00000553040 KCPQ6ZWJ8 1503 aa14.36□□□□□ -0.11
LMBR1L-229ENST00000553040 CICQ96RK0 1608 aaPredicted RBP14.35□□□□□ -0.11
LMBR1L-229ENST00000553040 RPS6KA4O75676 772 aa14.35□□□□□ -0.11
LMBR1L-229ENST00000553040 CRKLP46109 303 aaKnown RBP14.35□□□□□ -0.11
LMBR1L-229ENST00000553040 TRAPPC3LQ5T215 181 aa14.35□□□□□ -0.11
LMBR1L-229ENST00000553040 DNAJC10Q8IXB1 793 aa14.35□□□□□ -0.11
LMBR1L-229ENST00000553040 KLHL34Q8N239 644 aa14.35□□□□□ -0.11
LMBR1L-229ENST00000553040 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
LMBR1L-229ENST00000553040 UBR2Q8IWV8 1755 aa14.34□□□□□ -0.11
LMBR1L-229ENST00000553040 ARHGEF1Q92888 912 aaKnown RBP14.34□□□□□ -0.11
LMBR1L-229ENST00000553040 UTRNP46939 3433 aa14.34□□□□□ -0.11
LMBR1L-229ENST00000553040 GOLGB1Q14789 3259 aaKnown RBP14.33□□□□□ -0.12
LMBR1L-229ENST00000553040 DCTN1Q14203 1278 aa14.33□□□□□ -0.12
LMBR1L-229ENST00000553040 INTS5Q6P9B9 1019 aaKnown RBP14.33□□□□□ -0.12
LMBR1L-229ENST00000553040 MCM10Q7L590 875 aa14.33□□□□□ -0.12
LMBR1L-229ENST00000553040 PLEKHF1Q96S99 279 aa14.33□□□□□ -0.12
LMBR1L-229ENST00000553040 MYBBP1AQ9BQG0 1328 aaKnown RBP14.33□□□□□ -0.12
LMBR1L-229ENST00000553040 DLG5Q8TDM6 1919 aa14.33□□□□□ -0.12
LMBR1L-229ENST00000553040 CYP19A1P11511 503 aaPredicted RBP14.32□□□□□ -0.12
LMBR1L-229ENST00000553040 ADRA2BP18089 450 aa14.32□□□□□ -0.12
LMBR1L-229ENST00000553040 ZNF790Q6PG37 636 aa14.32□□□□□ -0.12
LMBR1L-229ENST00000553040 TTC5Q8N0Z6 440 aa14.32□□□□□ -0.12
LMBR1L-229ENST00000553040 NLGN2Q8NFZ4 835 aa14.32□□□□□ -0.12
LMBR1L-229ENST00000553040 RTF1Q92541 710 aaKnown RBP14.32□□□□□ -0.12
LMBR1L-229ENST00000553040 C4AP0C0L4 1744 aa14.32□□□□□ -0.12
LMBR1L-229ENST00000553040 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
LMBR1L-229ENST00000553040 KCNQ3O43525 872 aa14.31□□□□□ -0.12
LMBR1L-229ENST00000553040 RFC4P35249 363 aa14.31□□□□□ -0.12
LMBR1L-229ENST00000553040 VSIG10Q8N0Z9 540 aa14.31□□□□□ -0.12
LMBR1L-229ENST00000553040 ZNF496Q96IT1 587 aaPredicted RBP14.31□□□□□ -0.12
LMBR1L-229ENST00000553040 PRKRIP1Q9H875 184 aaPredicted RBP14.31□□□□□ -0.12
LMBR1L-229ENST00000553040 CCDC87Q9NVE4 849 aa14.31□□□□□ -0.12
LMBR1L-229ENST00000553040 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
LMBR1L-229ENST00000553040 HTATSF1O43719 755 aaKnown RBP14.3□□□□□ -0.12
LMBR1L-229ENST00000553040 NEFMP07197 916 aa14.3□□□□□ -0.12
LMBR1L-229ENST00000553040 GYS1P13807 737 aa14.29□□□□□ -0.12
LMBR1L-229ENST00000553040 SRP68Q9UHB9 627 aaKnown RBP14.29□□□□□ -0.12
LMBR1L-229ENST00000553040 HEG1Q9ULI3 1381 aa14.29□□□□□ -0.12
LMBR1L-229ENST00000553040 MMP10P09238 476 aa14.28□□□□□ -0.12
LMBR1L-229ENST00000553040 NFE2L2Q16236 605 aa14.28□□□□□ -0.12
LMBR1L-229ENST00000553040 NLGN1Q8N2Q7 840 aa14.28□□□□□ -0.12
LMBR1L-229ENST00000553040 FMNL2Q96PY5 1086 aa14.28□□□□□ -0.12
LMBR1L-229ENST00000553040 PNNQ9H307 717 aaKnown RBP14.28□□□□□ -0.12
LMBR1L-229ENST00000553040 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
LMBR1L-229ENST00000553040 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.12
LMBR1L-229ENST00000553040 MAPK8IP3Q9UPT6 1336 aa14.27□□□□□ -0.12
LMBR1L-229ENST00000553040 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
LMBR1L-229ENST00000553040 STARD3NLO95772 234 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms