RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 NUDCQ9Y266 331 aa10.27□□□□□ -0.77
NPAS3-213ENST00000552874 A0A0G2JS52 829 aa10.26□□□□□ -0.77
NPAS3-213ENST00000552874 CCER2I3L3R5 266 aa10.26□□□□□ -0.77
NPAS3-213ENST00000552874 MYT1Q01538 1121 aa10.26□□□□□ -0.77
NPAS3-213ENST00000552874 PDE3BQ13370 1112 aa10.26□□□□□ -0.77
NPAS3-213ENST00000552874 AMOTQ4VCS5 1084 aa10.26□□□□□ -0.77
NPAS3-213ENST00000552874 ZNF530Q6P9A1 599 aaPredicted RBP10.26□□□□□ -0.77
NPAS3-213ENST00000552874 FAM196AQ6ZSG2 479 aa10.26□□□□□ -0.77
NPAS3-213ENST00000552874 ADAMTS8Q9UP79 889 aa10.26□□□□□ -0.77
NPAS3-213ENST00000552874 SPG7Q9UQ90 795 aa10.26□□□□□ -0.77
NPAS3-213ENST00000552874 KCNQ2O43526 872 aa10.25□□□□□ -0.77
NPAS3-213ENST00000552874 AKAP4Q5JQC9 854 aa10.25□□□□□ -0.77
NPAS3-213ENST00000552874 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
NPAS3-213ENST00000552874 IFNL2Q8IZJ0 200 aa10.25□□□□□ -0.77
NPAS3-213ENST00000552874 MRS2Q9HD23 443 aa10.25□□□□□ -0.77
NPAS3-213ENST00000552874 PLEKHO1Q53GL0 409 aaPredicted RBP10.24□□□□□ -0.77
NPAS3-213ENST00000552874 MIER1Q8N108 512 aa10.24□□□□□ -0.77
NPAS3-213ENST00000552874 DDX54Q8TDD1 881 aaKnown RBP10.24□□□□□ -0.77
NPAS3-213ENST00000552874 SOCS7O14512 581 aa10.23□□□□□ -0.77
NPAS3-213ENST00000552874 GAS2L2Q8NHY3 880 aa10.23□□□□□ -0.77
NPAS3-213ENST00000552874 BCL11BQ9C0K0 894 aaPredicted RBP10.23□□□□□ -0.77
NPAS3-213ENST00000552874 BCORQ6W2J9 1755 aa10.23□□□□□ -0.77
NPAS3-213ENST00000552874 CACNA1FO60840 1977 aa10.23□□□□□ -0.77
NPAS3-213ENST00000552874 TRIM37O94972 964 aa10.22□□□□□ -0.77
NPAS3-213ENST00000552874 NFE2L2Q16236 605 aa10.22□□□□□ -0.77
NPAS3-213ENST00000552874 IL17REQ8NFR9 667 aa10.22□□□□□ -0.77
NPAS3-213ENST00000552874 ACSBG1Q96GR2 724 aa10.22□□□□□ -0.77
NPAS3-213ENST00000552874 DCAF5Q96JK2 942 aa10.22□□□□□ -0.77
NPAS3-213ENST00000552874 RNMTO43148 476 aaKnown RBP10.21□□□□□ -0.77
NPAS3-213ENST00000552874 WDR43Q15061 677 aaKnown RBP eCLIP10.21□□□□□ -0.77
NPAS3-213ENST00000552874 MPRIPQ6WCQ1 1025 aa10.21□□□□□ -0.77
NPAS3-213ENST00000552874 CCDC146Q8IYE0 955 aa10.21□□□□□ -0.77
NPAS3-213ENST00000552874 RUNDC1Q96C34 613 aa10.21□□□□□ -0.77
NPAS3-213ENST00000552874 LGR6Q9HBX8 967 aa10.21□□□□□ -0.77
NPAS3-213ENST00000552874 SCN7AQ01118 1682 aa10.21□□□□□ -0.78
NPAS3-213ENST00000552874 GNAT3A8MTJ3 354 aa10.2□□□□□ -0.78
NPAS3-213ENST00000552874 ERVV-2B6SEH9 535 aa10.2□□□□□ -0.78
NPAS3-213ENST00000552874 HSP90AB1P08238 724 aaKnown RBP10.2□□□□□ -0.78
NPAS3-213ENST00000552874 TMPOP42166 694 aaKnown RBP10.2□□□□□ -0.78
NPAS3-213ENST00000552874 PRIM1P49642 420 aaKnown RBP10.2□□□□□ -0.78
NPAS3-213ENST00000552874 PIGBQ92521 554 aa10.2□□□□□ -0.78
NPAS3-213ENST00000552874 CAMKK2Q96RR4 588 aa10.2□□□□□ -0.78
NPAS3-213ENST00000552874 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
NPAS3-213ENST00000552874 PALLDQ8WX93 1383 aa10.19□□□□□ -0.78
NPAS3-213ENST00000552874 HTATSF1O43719 755 aaKnown RBP10.19□□□□□ -0.78
NPAS3-213ENST00000552874 C1orf141Q5JVX7 400 aa10.19□□□□□ -0.78
NPAS3-213ENST00000552874 CCDC125Q86Z20 511 aa10.19□□□□□ -0.78
NPAS3-213ENST00000552874 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
NPAS3-213ENST00000552874 PROM2Q8N271 834 aa10.19□□□□□ -0.78
NPAS3-213ENST00000552874 SLC52A2Q9HAB3 445 aa10.19□□□□□ -0.78
NPAS3-213ENST00000552874 HEG1Q9ULI3 1381 aa10.18□□□□□ -0.78
NPAS3-213ENST00000552874 ZNF521Q96K83 1311 aa10.18□□□□□ -0.78
NPAS3-213ENST00000552874 MAPK8IP3Q9UPT6 1336 aa10.18□□□□□ -0.78
NPAS3-213ENST00000552874 PLSCR1O15162 318 aa10.18□□□□□ -0.78
NPAS3-213ENST00000552874 DEFB132Q7Z7B7 95 aa10.18□□□□□ -0.78
NPAS3-213ENST00000552874 ANKRD36CQ5JPF3 1778 aa10.17□□□□□ -0.78
NPAS3-213ENST00000552874 APAF1O14727 1248 aa10.17□□□□□ -0.78
NPAS3-213ENST00000552874 MKRN4PQ13434 485 aaPredicted RBP10.17□□□□□ -0.78
NPAS3-213ENST00000552874 DCTN1Q14203 1278 aa10.17□□□□□ -0.78
NPAS3-213ENST00000552874 MCM10Q7L590 875 aa10.17□□□□□ -0.78
NPAS3-213ENST00000552874 SLC4A9Q96Q91 983 aa10.17□□□□□ -0.78
NPAS3-213ENST00000552874 RRP7AQ9Y3A4 280 aaKnown RBP10.17□□□□□ -0.78
NPAS3-213ENST00000552874 N4BP2Q86UW6 1770 aaPredicted RBP10.16□□□□□ -0.78
NPAS3-213ENST00000552874 THUMPD2Q9BTF0 503 aaKnown RBP10.16□□□□□ -0.78
NPAS3-213ENST00000552874 PNNQ9H307 717 aaKnown RBP10.16□□□□□ -0.78
NPAS3-213ENST00000552874 ATG3Q9NT62 314 aa10.16□□□□□ -0.78
NPAS3-213ENST00000552874 LRRC4BQ9NT99 713 aa10.16□□□□□ -0.78
NPAS3-213ENST00000552874 ASAP1Q9ULH1 1129 aa10.16□□□□□ -0.78
NPAS3-213ENST00000552874 LRP5O75197 1615 aa10.15□□□□□ -0.78
NPAS3-213ENST00000552874 NUP98P52948 1817 aa10.15□□□□□ -0.78
NPAS3-213ENST00000552874 EN1Q05925 392 aaPredicted RBP10.15□□□□□ -0.78
NPAS3-213ENST00000552874 EZH2Q15910 746 aaKnown RBP10.15□□□□□ -0.78
NPAS3-213ENST00000552874 CCDC27Q2M243 656 aa10.15□□□□□ -0.78
NPAS3-213ENST00000552874 NFATC2IPQ8NCF5 419 aa10.15□□□□□ -0.78
NPAS3-213ENST00000552874 ANO8Q9HCE9 1232 aaPredicted RBP10.15□□□□□ -0.78
NPAS3-213ENST00000552874 TMOD3Q9NYL9 352 aa10.15□□□□□ -0.78
NPAS3-213ENST00000552874 ARFGEF2Q9Y6D5 1785 aa10.14□□□□□ -0.79
NPAS3-213ENST00000552874 GOLGB1Q14789 3259 aaKnown RBP10.14□□□□□ -0.79
NPAS3-213ENST00000552874 APBA3O96018 575 aa10.14□□□□□ -0.79
NPAS3-213ENST00000552874 ZNF853P0CG23 659 aa10.14□□□□□ -0.79
NPAS3-213ENST00000552874 BAG6P46379 1132 aa10.14□□□□□ -0.79
NPAS3-213ENST00000552874 RIPK4P57078 832 aa10.14□□□□□ -0.79
NPAS3-213ENST00000552874 FAM9BQ8IZU0 186 aa10.14□□□□□ -0.79
NPAS3-213ENST00000552874 AFDNP55196 1824 aaKnown RBP10.13□□□□□ -0.79
NPAS3-213ENST00000552874 KIF13BQ9NQT8 1826 aa10.13□□□□□ -0.79
NPAS3-213ENST00000552874 KCNQ3O43525 872 aa10.13□□□□□ -0.79
NPAS3-213ENST00000552874 CABP4P57796 275 aa10.13□□□□□ -0.79
NPAS3-213ENST00000552874 ITPK1Q13572 414 aa10.13□□□□□ -0.79
NPAS3-213ENST00000552874 TXNRD1Q16881 649 aa10.13□□□□□ -0.79
NPAS3-213ENST00000552874 SYTL4Q96C24 671 aaPredicted RBP10.13□□□□□ -0.79
NPAS3-213ENST00000552874 NRXN2Q9P2S2 1712 aa10.13□□□□□ -0.79
NPAS3-213ENST00000552874 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
NPAS3-213ENST00000552874 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
NPAS3-213ENST00000552874 SLC39A6Q13433 755 aa10.12□□□□□ -0.79
NPAS3-213ENST00000552874 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
NPAS3-213ENST00000552874 WWC1Q8IX03 1113 aa10.12□□□□□ -0.79
NPAS3-213ENST00000552874 KIAA1551Q9HCM1 1747 aa10.12□□□□□ -0.79
NPAS3-213ENST00000552874 LOC102724428A0A0B4J2F2 783 aa10.11□□□□□ -0.79
NPAS3-213ENST00000552874 SIK1P57059 783 aa10.11□□□□□ -0.79
NPAS3-213ENST00000552874 LMOD3Q0VAK6 560 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms