RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 HSP90AB1P08238 724 aaKnown RBP12.84□□□□□ -0.35
RFX4-210ENST00000552773 RABEP1Q15276 862 aa12.84□□□□□ -0.35
RFX4-210ENST00000552773 TBC1D9Q6ZT07 1266 aa12.84□□□□□ -0.35
RFX4-210ENST00000552773 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
RFX4-210ENST00000552773 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
RFX4-210ENST00000552773 ANTXR1Q9H6X2 564 aa12.84□□□□□ -0.35
RFX4-210ENST00000552773 DDX11L8A8MPP1 907 aa12.83□□□□□ -0.35
RFX4-210ENST00000552773 GCP02774 474 aa12.83□□□□□ -0.35
RFX4-210ENST00000552773 HSP90AA1P07900 732 aaKnown RBP12.83□□□□□ -0.35
RFX4-210ENST00000552773 NUTM2GQ5VZR2 741 aa12.83□□□□□ -0.35
RFX4-210ENST00000552773 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.35
RFX4-210ENST00000552773 MEIS3Q99687 375 aa12.83□□□□□ -0.35
RFX4-210ENST00000552773 AOX1Q06278 1338 aa12.83□□□□□ -0.36
RFX4-210ENST00000552773 UBTFL1P0CB47 393 aaPredicted RBP12.83□□□□□ -0.36
RFX4-210ENST00000552773 ATP8B2P98198 1209 aa12.83□□□□□ -0.36
RFX4-210ENST00000552773 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
RFX4-210ENST00000552773 ARHGEF25Q86VW2 580 aa12.83□□□□□ -0.36
RFX4-210ENST00000552773 LRRCC1Q9C099 1032 aa12.83□□□□□ -0.36
RFX4-210ENST00000552773 FAM208AQ9UK61 1670 aaKnown RBP12.82□□□□□ -0.36
RFX4-210ENST00000552773 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
RFX4-210ENST00000552773 ATF3P18847 181 aa12.82□□□□□ -0.36
RFX4-210ENST00000552773 MCCP23508 829 aa12.82□□□□□ -0.36
RFX4-210ENST00000552773 GBP4Q96PP9 640 aa12.82□□□□□ -0.36
RFX4-210ENST00000552773 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
RFX4-210ENST00000552773 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
RFX4-210ENST00000552773 ABCC6O95255 1503 aa12.82□□□□□ -0.36
RFX4-210ENST00000552773 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
RFX4-210ENST00000552773 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
RFX4-210ENST00000552773 LMO7Q8WWI1 1683 aa12.81□□□□□ -0.36
RFX4-210ENST00000552773 DBF4Q9UBU7 674 aaPredicted RBP12.81□□□□□ -0.36
RFX4-210ENST00000552773 BTBD11A6QL63 1104 aa12.8□□□□□ -0.36
RFX4-210ENST00000552773 ST18O60284 1047 aa12.8□□□□□ -0.36
RFX4-210ENST00000552773 FRAT2O75474 233 aaPredicted RBP12.8□□□□□ -0.36
RFX4-210ENST00000552773 L1TD1Q5T7N2 865 aaKnown RBP12.8□□□□□ -0.36
RFX4-210ENST00000552773 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
RFX4-210ENST00000552773 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
RFX4-210ENST00000552773 DDX58O95786 925 aaKnown RBP12.8□□□□□ -0.36
RFX4-210ENST00000552773 MCM2P49736 904 aa12.8□□□□□ -0.36
RFX4-210ENST00000552773 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
RFX4-210ENST00000552773 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
RFX4-210ENST00000552773 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
RFX4-210ENST00000552773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.36
RFX4-210ENST00000552773 ISY1Q9ULR0 285 aaKnown RBP12.8□□□□□ -0.36
RFX4-210ENST00000552773 IBTKQ9P2D0 1353 aaPredicted RBP12.79□□□□□ -0.36
RFX4-210ENST00000552773 GOLGA6L22H0YM25 854 aa12.79□□□□□ -0.36
RFX4-210ENST00000552773 ERC2O15083 957 aa12.79□□□□□ -0.36
RFX4-210ENST00000552773 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
RFX4-210ENST00000552773 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
RFX4-210ENST00000552773 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
RFX4-210ENST00000552773 ALDH1L1O75891 902 aa12.78□□□□□ -0.36
RFX4-210ENST00000552773 G2E3Q7L622 706 aa12.78□□□□□ -0.36
RFX4-210ENST00000552773 ANKRD24Q8TF21 1146 aa12.78□□□□□ -0.36
RFX4-210ENST00000552773 CWC22Q9HCG8 908 aaKnown RBP12.78□□□□□ -0.36
RFX4-210ENST00000552773 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
RFX4-210ENST00000552773 NPHP3Q7Z494 1330 aa12.77□□□□□ -0.36
RFX4-210ENST00000552773 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.36
RFX4-210ENST00000552773 PDE1AP54750 535 aa12.77□□□□□ -0.36
RFX4-210ENST00000552773 RAPGEF4Q8WZA2 1011 aa12.77□□□□□ -0.36
RFX4-210ENST00000552773 SPG7Q9UQ90 795 aa12.77□□□□□ -0.36
RFX4-210ENST00000552773 CAMTA1Q9Y6Y1 1673 aa12.77□□□□□ -0.37
RFX4-210ENST00000552773 KDM3BQ7LBC6 1761 aa12.77□□□□□ -0.37
RFX4-210ENST00000552773 F6X3S4 739 aa12.77□□□□□ -0.37
RFX4-210ENST00000552773 RNMTO43148 476 aaKnown RBP12.77□□□□□ -0.37
RFX4-210ENST00000552773 SDSP20132 328 aa12.77□□□□□ -0.37
RFX4-210ENST00000552773 ERC1Q8IUD2 1116 aa12.77□□□□□ -0.37
RFX4-210ENST00000552773 DNAAF4Q8WXU2 420 aa12.77□□□□□ -0.37
RFX4-210ENST00000552773 STAP2Q9UGK3 403 aa12.77□□□□□ -0.37
RFX4-210ENST00000552773 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
RFX4-210ENST00000552773 MX1P20591 662 aa12.76□□□□□ -0.37
RFX4-210ENST00000552773 MCM4P33991 863 aa12.76□□□□□ -0.37
RFX4-210ENST00000552773 NUCB2P80303 420 aa12.76□□□□□ -0.37
RFX4-210ENST00000552773 LMOD2Q6P5Q4 547 aa12.76□□□□□ -0.37
RFX4-210ENST00000552773 SSH3Q8TE77 659 aa12.76□□□□□ -0.37
RFX4-210ENST00000552773 KIF1BPQ96EK5 621 aa12.76□□□□□ -0.37
RFX4-210ENST00000552773 TRPM3Q9HCF6 1732 aaPredicted RBP12.75□□□□□ -0.37
RFX4-210ENST00000552773 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
RFX4-210ENST00000552773 ANAPC15P60006 121 aa12.75□□□□□ -0.37
RFX4-210ENST00000552773 GPATCH3Q96I76 525 aa12.75□□□□□ -0.37
RFX4-210ENST00000552773 ORAI2Q96SN7 254 aa12.75□□□□□ -0.37
RFX4-210ENST00000552773 USP26Q9BXU7 913 aa12.75□□□□□ -0.37
RFX4-210ENST00000552773 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
RFX4-210ENST00000552773 USP44Q9H0E7 712 aa12.74□□□□□ -0.37
RFX4-210ENST00000552773 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
RFX4-210ENST00000552773 ERBB3P21860 1342 aa12.73□□□□□ -0.37
RFX4-210ENST00000552773 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
RFX4-210ENST00000552773 DDIT3P35638 169 aa12.72□□□□□ -0.37
RFX4-210ENST00000552773 MTX1Q13505 466 aa12.72□□□□□ -0.37
RFX4-210ENST00000552773 POLA2Q14181 598 aa12.72□□□□□ -0.37
RFX4-210ENST00000552773 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
RFX4-210ENST00000552773 TTC41PQ6P2S7 1318 aa12.72□□□□□ -0.37
RFX4-210ENST00000552773 HEG1Q9ULI3 1381 aa12.71□□□□□ -0.37
RFX4-210ENST00000552773 APBB1O00213 710 aa12.71□□□□□ -0.37
RFX4-210ENST00000552773 GIGYF1O75420 1035 aaPredicted RBP12.71□□□□□ -0.37
RFX4-210ENST00000552773 NEXNQ0ZGT2 675 aa12.71□□□□□ -0.37
RFX4-210ENST00000552773 RAB3GAP1Q15042 981 aa12.71□□□□□ -0.37
RFX4-210ENST00000552773 BEND3Q5T5X7 828 aa12.71□□□□□ -0.37
RFX4-210ENST00000552773 KIF2CQ99661 725 aa12.71□□□□□ -0.37
RFX4-210ENST00000552773 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.37
RFX4-210ENST00000552773 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
RFX4-210ENST00000552773 ALS2Q96Q42 1657 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms