RNA–Protein interactions for RNA: ENST00000552752.5

PFKM-227, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 887 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-227	ENST00000552752	PTCD1	O75127	700 aa	Known RBP	18.98	■□□□□ 0.63
PFKM-227	ENST00000552752	SLC39A6	Q13433	755 aa		18.98	■□□□□ 0.63
PFKM-227	ENST00000552752	TAF7	Q15545	349 aa	Predicted RBP	18.98	■□□□□ 0.63
PFKM-227	ENST00000552752	TXNRD1	Q16881	649 aa		18.98	■□□□□ 0.63
PFKM-227	ENST00000552752	CAMKK2	Q96RR4	588 aa		18.98	■□□□□ 0.63
PFKM-227	ENST00000552752	LAS1L	Q9Y4W2	734 aa	Known RBP	18.98	■□□□□ 0.63
PFKM-227	ENST00000552752	CEMIP	Q8WUJ3	1361 aa		18.97	■□□□□ 0.63
PFKM-227	ENST00000552752	CCNL1	Q9UK58	526 aa	Predicted RBP	18.97	■□□□□ 0.63
PFKM-227	ENST00000552752	TRIM35	Q9UPQ4	493 aa		18.97	■□□□□ 0.63
PFKM-227	ENST00000552752	KCNQ4	P56696	695 aa		18.96	■□□□□ 0.63
PFKM-227	ENST00000552752	MIS18A	Q9NYP9	233 aa		18.96	■□□□□ 0.63
PFKM-227	ENST00000552752	DOT1L	Q8TEK3	1739 aa		18.96	■□□□□ 0.63
PFKM-227	ENST00000552752	CALD1	Q05682	793 aa	Known RBP	18.95	■□□□□ 0.62
PFKM-227	ENST00000552752	NHS	Q6T4R5	1651 aa		18.95	■□□□□ 0.62
PFKM-227	ENST00000552752	LOC102724428	A0A0B4J2F2	783 aa		18.94	■□□□□ 0.62
PFKM-227	ENST00000552752	SIK1	P57059	783 aa		18.94	■□□□□ 0.62
PFKM-227	ENST00000552752	SLC27A3	Q5K4L6	730 aa		18.94	■□□□□ 0.62
PFKM-227	ENST00000552752	ATP6V1A	P38606	617 aa		18.93	■□□□□ 0.62
PFKM-227	ENST00000552752	ZNF790	Q6PG37	636 aa		18.93	■□□□□ 0.62
PFKM-227	ENST00000552752	PROM2	Q8N271	834 aa		18.93	■□□□□ 0.62
PFKM-227	ENST00000552752	TSPYL4	Q9UJ04	414 aa		18.93	■□□□□ 0.62
PFKM-227	ENST00000552752	EP400	Q96L91	3159 aa		18.92	■□□□□ 0.62
PFKM-227	ENST00000552752	NBPF14	Q5TI25	921 aa		18.92	■□□□□ 0.62
PFKM-227	ENST00000552752	WWC1	Q8IX03	1113 aa		18.91	■□□□□ 0.62
PFKM-227	ENST00000552752	TOGARAM1	Q9Y4F4	1720 aa		18.91	■□□□□ 0.62
PFKM-227	ENST00000552752	KCNQ3	O43525	872 aa		18.9	■□□□□ 0.62
PFKM-227	ENST00000552752	HMGB2	P26583	209 aa	Known RBP	18.9	■□□□□ 0.62
PFKM-227	ENST00000552752	CCDC27	Q2M243	656 aa		18.9	■□□□□ 0.62
PFKM-227	ENST00000552752	NGEF	Q8N5V2	710 aa		18.9	■□□□□ 0.62
PFKM-227	ENST00000552752	FMNL2	Q96PY5	1086 aa		18.9	■□□□□ 0.62
PFKM-227	ENST00000552752	LRRC4B	Q9NT99	713 aa		18.9	■□□□□ 0.62
PFKM-227	ENST00000552752	KAT6B	Q8WYB5	2073 aa		18.89	■□□□□ 0.62
PFKM-227	ENST00000552752	MRC1	P22897	1456 aa		18.89	■□□□□ 0.61
PFKM-227	ENST00000552752	ZNF496	Q96IT1	587 aa	Predicted RBP	18.88	■□□□□ 0.61
PFKM-227	ENST00000552752	STK32B	Q9NY57	414 aa		18.88	■□□□□ 0.61
PFKM-227	ENST00000552752	TNS1	Q9HBL0	1735 aa	Known RBP	18.88	■□□□□ 0.61
PFKM-227	ENST00000552752	SBF2	Q86WG5	1849 aa		18.88	■□□□□ 0.61
PFKM-227	ENST00000552752	BTAF1	O14981	1849 aa		18.87	■□□□□ 0.61
PFKM-227	ENST00000552752	GNAI1	P63096	354 aa		18.87	■□□□□ 0.61
PFKM-227	ENST00000552752	NCBP3	Q53F19	620 aa	Known RBP	18.87	■□□□□ 0.61
PFKM-227	ENST00000552752	CFAP44	Q96MT7	982 aa		18.87	■□□□□ 0.61
PFKM-227	ENST00000552752	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
PFKM-227	ENST00000552752	ITPK1	Q13572	414 aa		18.86	■□□□□ 0.61
PFKM-227	ENST00000552752	BABAM1	Q9NWV8	329 aa		18.86	■□□□□ 0.61
PFKM-227	ENST00000552752	CHL1	O00533	1208 aa		18.85	■□□□□ 0.61
PFKM-227	ENST00000552752	DNAJC10	Q8IXB1	793 aa		18.85	■□□□□ 0.61
PFKM-227	ENST00000552752	AK7	Q96M32	723 aa		18.85	■□□□□ 0.61
PFKM-227	ENST00000552752	SLC4A9	Q96Q91	983 aa		18.85	■□□□□ 0.61
PFKM-227	ENST00000552752	IFT57	Q9NWB7	429 aa		18.85	■□□□□ 0.61
PFKM-227	ENST00000552752	SCN11A	Q9UI33	1791 aa		18.84	■□□□□ 0.61
PFKM-227	ENST00000552752	WDR63	Q8IWG1	891 aa		18.84	■□□□□ 0.61
PFKM-227	ENST00000552752	LINC00116	Q8NCU8	138 aa		18.84	■□□□□ 0.61
PFKM-227	ENST00000552752	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.84	■□□□□ 0.61
PFKM-227	ENST00000552752	TFCP2L1	Q9NZI6	479 aa		18.84	■□□□□ 0.61
PFKM-227	ENST00000552752	STARD3NL	O95772	234 aa		18.83	■□□□□ 0.6
PFKM-227	ENST00000552752	SNRPA1	P09661	255 aa	Known RBP	18.83	■□□□□ 0.6
PFKM-227	ENST00000552752	EIF4A1	P60842	406 aa	Known RBP	18.83	■□□□□ 0.6
PFKM-227	ENST00000552752	VSIG10	Q8N0Z9	540 aa		18.83	■□□□□ 0.6
PFKM-227	ENST00000552752	ADAMTS7	Q9UKP4	1686 aa		18.82	■□□□□ 0.6
PFKM-227	ENST00000552752	HEG1	Q9ULI3	1381 aa		18.82	■□□□□ 0.6
PFKM-227	ENST00000552752	ITGB4	P16144	1822 aa		18.82	■□□□□ 0.6
PFKM-227	ENST00000552752	R3HDM1	Q15032	1099 aa	Known RBP	18.82	■□□□□ 0.6
PFKM-227	ENST00000552752	SLC15A2	Q16348	729 aa		18.82	■□□□□ 0.6
PFKM-227	ENST00000552752	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.82	■□□□□ 0.6
PFKM-227	ENST00000552752	MBIP	Q9NS73	344 aa		18.82	■□□□□ 0.6
PFKM-227	ENST00000552752	PSD	A5PKW4	1024 aa	Predicted RBP	18.81	■□□□□ 0.6
PFKM-227	ENST00000552752	MSH5	O43196	834 aa		18.81	■□□□□ 0.6
PFKM-227	ENST00000552752	IL16	Q14005	1332 aa		18.8	■□□□□ 0.6
PFKM-227	ENST00000552752	GNPAT	O15228	680 aa		18.8	■□□□□ 0.6
PFKM-227	ENST00000552752	ZNF827	Q17R98	1081 aa		18.8	■□□□□ 0.6
PFKM-227	ENST00000552752	TSR2	Q969E8	191 aa	Known RBP	18.8	■□□□□ 0.6
PFKM-227	ENST00000552752	MYH16	Q9H6N6	1097 aa		18.8	■□□□□ 0.6
PFKM-227	ENST00000552752	PHF14	O94880	888 aa		18.79	■□□□□ 0.6
PFKM-227	ENST00000552752	ZNF853	P0CG23	659 aa		18.79	■□□□□ 0.6
PFKM-227	ENST00000552752	CRKL	P46109	303 aa	Known RBP	18.79	■□□□□ 0.6
PFKM-227	ENST00000552752	GOLGA2	Q08379	1002 aa		18.79	■□□□□ 0.6
PFKM-227	ENST00000552752	NPM2	Q86SE8	214 aa	Known RBP	18.79	■□□□□ 0.6
PFKM-227	ENST00000552752	PRAMEF22	A3QJZ6	481 aa		18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	ELL2	O00472	640 aa	Predicted RBP	18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	GIGYF1	O75420	1035 aa	Predicted RBP	18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	CYP19A1	P11511	503 aa	Predicted RBP	18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	EIF2S2	P20042	333 aa	Known RBP	18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	AKT1S1	Q96B36	256 aa		18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	CCDC87	Q9NVE4	849 aa		18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	RTCB	Q9Y3I0	505 aa	Known RBP	18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	USP16	Q9Y5T5	823 aa		18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	KCP	Q6ZWJ8	1503 aa		18.78	■□□□□ 0.6
PFKM-227	ENST00000552752	DLG5	Q8TDM6	1919 aa		18.77	■□□□□ 0.6
PFKM-227	ENST00000552752	CANX	P27824	592 aa	Known RBP	18.77	■□□□□ 0.6
PFKM-227	ENST00000552752	RC3H1	Q5TC82	1133 aa	Known RBP	18.77	■□□□□ 0.6
PFKM-227	ENST00000552752	KRT24	Q2M2I5	525 aa		18.76	■□□□□ 0.59
PFKM-227	ENST00000552752	NECTIN2	Q92692	538 aa		18.76	■□□□□ 0.59
PFKM-227	ENST00000552752	ARX	Q96QS3	562 aa		18.76	■□□□□ 0.59
PFKM-227	ENST00000552752	CNTNAP4	Q9C0A0	1308 aa		18.75	■□□□□ 0.59
PFKM-227	ENST00000552752	DUSP27	Q5VZP5	1158 aa		18.75	■□□□□ 0.59
PFKM-227	ENST00000552752	SMIM5	Q71RC9	77 aa		18.75	■□□□□ 0.59
PFKM-227	ENST00000552752	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.74	■□□□□ 0.59
PFKM-227	ENST00000552752	RGPD4	Q7Z3J3	1758 aa		18.74	■□□□□ 0.59
PFKM-227	ENST00000552752	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms