RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 ZNF530Q6P9A1 599 aaPredicted RBP12.18□□□□□ -0.46
CCDC59-207ENST00000552606 PTF1AQ7RTS3 328 aa12.18□□□□□ -0.46
CCDC59-207ENST00000552606 IFNL2Q8IZJ0 200 aa12.18□□□□□ -0.46
CCDC59-207ENST00000552606 PHACTR3Q96KR7 559 aa12.18□□□□□ -0.46
CCDC59-207ENST00000552606 TRIM37O94972 964 aa12.17□□□□□ -0.46
CCDC59-207ENST00000552606 LAMB4A4D0S4 1761 aa12.16□□□□□ -0.46
CCDC59-207ENST00000552606 KCNQ2O43526 872 aa12.16□□□□□ -0.46
CCDC59-207ENST00000552606 CCDC125Q86Z20 511 aa12.16□□□□□ -0.46
CCDC59-207ENST00000552606 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
CCDC59-207ENST00000552606 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
CCDC59-207ENST00000552606 CEMIPQ8WUJ3 1361 aa12.16□□□□□ -0.46
CCDC59-207ENST00000552606 AKAP4Q5JQC9 854 aa12.15□□□□□ -0.46
CCDC59-207ENST00000552606 DIEXFQ68CQ4 756 aaKnown RBP12.15□□□□□ -0.46
CCDC59-207ENST00000552606 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
CCDC59-207ENST00000552606 MRS2Q9HD23 443 aa12.15□□□□□ -0.46
CCDC59-207ENST00000552606 KCPQ6ZWJ8 1503 aa12.15□□□□□ -0.46
CCDC59-207ENST00000552606 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
CCDC59-207ENST00000552606 EVX2Q03828 476 aa12.14□□□□□ -0.47
CCDC59-207ENST00000552606 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC59-207ENST00000552606 C1orf141Q5JVX7 400 aa12.14□□□□□ -0.47
CCDC59-207ENST00000552606 PNISRQ8TF01 805 aaKnown RBP12.14□□□□□ -0.47
CCDC59-207ENST00000552606 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
CCDC59-207ENST00000552606 ADAMTS8Q9UP79 889 aa12.14□□□□□ -0.47
CCDC59-207ENST00000552606 UBR3Q6ZT12 1888 aa12.14□□□□□ -0.47
CCDC59-207ENST00000552606 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
CCDC59-207ENST00000552606 C4BP0C0L5 1744 aa12.13□□□□□ -0.47
CCDC59-207ENST00000552606 CASZ1Q86V15 1759 aa12.13□□□□□ -0.47
CCDC59-207ENST00000552606 DEFB132Q7Z7B7 95 aa12.12□□□□□ -0.47
CCDC59-207ENST00000552606 MYH14Q7Z406 1995 aaKnown RBP12.11□□□□□ -0.47
CCDC59-207ENST00000552606 ERVV-2B6SEH9 535 aa12.11□□□□□ -0.47
CCDC59-207ENST00000552606 PLSCR1O15162 318 aa12.11□□□□□ -0.47
CCDC59-207ENST00000552606 RNMTO43148 476 aaKnown RBP12.11□□□□□ -0.47
CCDC59-207ENST00000552606 BAG6P46379 1132 aa12.11□□□□□ -0.47
CCDC59-207ENST00000552606 NFE2L2Q16236 605 aa12.11□□□□□ -0.47
CCDC59-207ENST00000552606 MPRIPQ6WCQ1 1025 aa12.11□□□□□ -0.47
CCDC59-207ENST00000552606 CCDC146Q8IYE0 955 aa12.11□□□□□ -0.47
CCDC59-207ENST00000552606 CAMKK2Q96RR4 588 aa12.11□□□□□ -0.47
CCDC59-207ENST00000552606 PNNQ9H307 717 aaKnown RBP12.11□□□□□ -0.47
CCDC59-207ENST00000552606 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
CCDC59-207ENST00000552606 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
CCDC59-207ENST00000552606 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
CCDC59-207ENST00000552606 GNAT3A8MTJ3 354 aa12.1□□□□□ -0.47
CCDC59-207ENST00000552606 CCER2I3L3R5 266 aa12.1□□□□□ -0.47
CCDC59-207ENST00000552606 APBA3O96018 575 aa12.1□□□□□ -0.47
CCDC59-207ENST00000552606 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
CCDC59-207ENST00000552606 IL17REQ8NFR9 667 aa12.1□□□□□ -0.47
CCDC59-207ENST00000552606 PIGBQ92521 554 aa12.1□□□□□ -0.47
CCDC59-207ENST00000552606 RUNDC1Q96C34 613 aa12.1□□□□□ -0.47
CCDC59-207ENST00000552606 LGR6Q9HBX8 967 aa12.1□□□□□ -0.47
CCDC59-207ENST00000552606 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
CCDC59-207ENST00000552606 SYTL4Q96C24 671 aaPredicted RBP12.09□□□□□ -0.47
CCDC59-207ENST00000552606 SLC52A2Q9HAB3 445 aa12.09□□□□□ -0.47
CCDC59-207ENST00000552606 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
CCDC59-207ENST00000552606 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.47
CCDC59-207ENST00000552606 HTATSF1O43719 755 aaKnown RBP12.08□□□□□ -0.48
CCDC59-207ENST00000552606 TMPOP42166 694 aaKnown RBP12.08□□□□□ -0.48
CCDC59-207ENST00000552606 EZH2Q15910 746 aaKnown RBP12.08□□□□□ -0.48
CCDC59-207ENST00000552606 MIER1Q8N108 512 aa12.08□□□□□ -0.48
CCDC59-207ENST00000552606 FOXD4L1Q9NU39 408 aa12.08□□□□□ -0.48
CCDC59-207ENST00000552606 NEFMP07197 916 aa12.07□□□□□ -0.48
CCDC59-207ENST00000552606 PROM2Q8N271 834 aa12.07□□□□□ -0.48
CCDC59-207ENST00000552606 CABP4P57796 275 aa12.06□□□□□ -0.48
CCDC59-207ENST00000552606 DCTN1Q14203 1278 aa12.06□□□□□ -0.48
CCDC59-207ENST00000552606 MCM10Q7L590 875 aa12.06□□□□□ -0.48
CCDC59-207ENST00000552606 ATG3Q9NT62 314 aa12.06□□□□□ -0.48
CCDC59-207ENST00000552606 ASAP1Q9ULH1 1129 aa12.06□□□□□ -0.48
CCDC59-207ENST00000552606 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
CCDC59-207ENST00000552606 NFATC2IPQ8NCF5 419 aa12.05□□□□□ -0.48
CCDC59-207ENST00000552606 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
CCDC59-207ENST00000552606 RRP7AQ9Y3A4 280 aaKnown RBP12.05□□□□□ -0.48
CCDC59-207ENST00000552606 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
CCDC59-207ENST00000552606 APAF1O14727 1248 aa12.04□□□□□ -0.48
CCDC59-207ENST00000552606 RIPK4P57078 832 aa12.04□□□□□ -0.48
CCDC59-207ENST00000552606 RTF1Q92541 710 aaKnown RBP12.04□□□□□ -0.48
CCDC59-207ENST00000552606 SMARCC1Q92922 1105 aaPredicted RBP12.04□□□□□ -0.48
CCDC59-207ENST00000552606 THUMPD2Q9BTF0 503 aaKnown RBP12.04□□□□□ -0.48
CCDC59-207ENST00000552606 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
CCDC59-207ENST00000552606 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
CCDC59-207ENST00000552606 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
CCDC59-207ENST00000552606 TEFQ10587 303 aa12.03□□□□□ -0.48
CCDC59-207ENST00000552606 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
CCDC59-207ENST00000552606 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
CCDC59-207ENST00000552606 SLC27A3Q5K4L6 730 aa12.02□□□□□ -0.49
CCDC59-207ENST00000552606 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.49
CCDC59-207ENST00000552606 LRP5O75197 1615 aa12.01□□□□□ -0.49
CCDC59-207ENST00000552606 LOC102724428A0A0B4J2F2 783 aa12.01□□□□□ -0.49
CCDC59-207ENST00000552606 KCNQ4P56696 695 aa12.01□□□□□ -0.49
CCDC59-207ENST00000552606 SIK1P57059 783 aa12.01□□□□□ -0.49
CCDC59-207ENST00000552606 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
CCDC59-207ENST00000552606 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
CCDC59-207ENST00000552606 CCNL1Q9UK58 526 aaPredicted RBP12.01□□□□□ -0.49
CCDC59-207ENST00000552606 ITPK1Q13572 414 aa12□□□□□ -0.49
CCDC59-207ENST00000552606 NEUROD2Q15784 382 aa12□□□□□ -0.49
CCDC59-207ENST00000552606 ZNF790Q6PG37 636 aa12□□□□□ -0.49
CCDC59-207ENST00000552606 HEG1Q9ULI3 1381 aa12□□□□□ -0.49
CCDC59-207ENST00000552606 KCNQ3O43525 872 aa11.99□□□□□ -0.49
CCDC59-207ENST00000552606 ZNF827Q17R98 1081 aa11.99□□□□□ -0.49
CCDC59-207ENST00000552606 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
CCDC59-207ENST00000552606 CACNA1FO60840 1977 aa11.99□□□□□ -0.49
CCDC59-207ENST00000552606 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms